dstyk (dstyk)


Basic Information

Item Value
gene id dstyk
gene name dstyk
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 571588 ~ 607621 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034314229.1
CCCCCTTTTGGGCAGGCAGGTAGCGCGGCTCTGCGGCTGCACACAGCCTGCACTCAGTTTCTCCTCAGTAAACAACATCAGCACGGTATGATCTCTAACAGGAGACTTTAACACGGAATAACTCCGGCAGCACTACAGCCTGCAGCTGCTGCGGCAAGACAAACGAGCCTGTTGTTTTAAAGTGCACCCCCGGAAGTGGGGCATTTCTCCGTTAGCACACCGCAGTGGAGCTGATGGCTGTTTAACACGGGTCAGATTTTTATAAAGCGGGTTAAAATGTTCCGGCCTGAGTTTGGGTTTGGGCTTGGAGAGGAACATTTGCACACTTTTGCTTGAGTGATGGGTTGCTGTTGTCCGGGTTAGCCTGCtggctaaaaaacaaaaaaaagaaagaaagagaaagttgTTGTCTGTGACAAGTTAGCTAGCATCAGGCTAACTGAAGTTAGCGCGAGACGCTGGCTAGCAGACTTCAgagattttgtttgtgtttgttttgggatgtgatatatattttttttcatcggtttgtgtttttgtatatcacacacagataaagaagCAGCTGATCTGATCATTCAGACTGTCATCTGggtgttgttttgttgttgttgttgttgttttgttgttgttgttgagctgaatctggaggaggaggtggaggaggtggtgcAGGAGGGGGCGAATACTTTTTCTCCCTCACTTTatacacagaaatcacactttcAGACTTTAATGCATGAGATTTTTGTTGAAAGAAGTGTCAGAGTGGAGTGAAGGTGAAGTAGGTGtcagtgctgtgatgaagctgatgatgaAATAAGAACTTTTTTGGattcttaaagaaaaacaaaacaaaatcatcTGGCGGTTTTTCTCCTCATCTCTGATCCACAAGCTGCAGGAGATGCAGATGTGAGGGTCGGGTGAGGGGAAGAGCTGGCTGGGTTTTAGAGCTGTCACTTCTTCAGAGCTGAGATCTGGCTCGGAGCTttggaggaagagaaggaagtCTTcatcaccacctccaccaccaccatcatcttcatcatcatcagtgtgtgagagagagagagatgatggatGTAGTAAACGTGCAGAAGATGAGTCCTTTACCCCGAGAGCTCACTCGCGTCTTCAGCAGCTACAACAAAAGCTCAGCGCTGCTGAAGAAGAACCTGAAGGAGACGAACAGCTTCTTCAGAGAGATGAGACAGAACTACAGCAACGTGTGTACGGCTGGAGACCTCGAGCAGGGTCAGCTCGGCTGCGTCTCCATCCCGCGTCCCGACGAGGAGTTCCTTCACGGTGTCGTGAGTAGCGCCCCCTACATCCTGGTCCTCGGACAAGACTGCCCCGCCCGCTACCAGCTCCTCAACTGCCTCCTGGGAGAGAAGCTCCTCCCCCTCGGCTCAGAACTGGGCAGGACCTGTGGGCCGGGGGGCGGGGCTTGTAAAAGGAGGAAGTTGTGTTTCACTCACGGGCGTCAGACGCGACTCAGCCTGGCTCTCCCGGGGCAGTACGAGCTCGTGCACCAGTTAGCGGCTAACTGCAGCCGCTGGGACACCGTCCCCCTGCAGGACCTGGAGATCCAGGACGAGTGTGAGGATCCGGCGCACCGATTGGCCGAGCTCGAGATCACGCTACATCAATCGCTGCTGCAGGAGACTAGGATCATGGTGGTGCCGTGTGCAGGAGTGCAGCCCATTAAGGAGGCTCTGGAGGACTGCATGCAAAACACAATTCCCATAATTCTCTATGCTCTGAATCAGGACTCCGTTAGCCCAGACCAGACGGCCGAGCTCCTAAAGGTCCGCGACCTGCTTCCGTTTCCCATCTGCTTCGTCCGGGTCCCCAGTATTCCCAGTATTCCTGCCTCTCAGGTGGAATCTGGCGCTCTCCAGAAGCAGCTCCTTTCCCTGGGCCTCCTCCCGGACGGACAGGGAAACTGTTCCTGCGGCGCTCCGTCCCAAACGCACGGCTCCTCCGGGAAACCTCACAGCGTCCTCGGAGAGAATTTGGACCGCCTTCATCGACTCCTCGTCCACTTCACCCGGCAGGTGTTCACCAGTCAGCTGGTGGAGGCGGCGAACCGACTGAACGCACTCCACTGCACCTGCCTCGACCTCTTCATCAACCAGGCGTTCGACATGCAGAGAGATCTTCAGATCACGCCCCGGAGGCTGGAGTACACCCGGGAGAAGGAGGCGGAGCTCTTCACCTCCCTCATGGCCATCGCCAACCGCAAGCAGGAGGAGATGAAGGAGATGATCGTGGAGACGCTGAGCACCATGAAGGAGCAGCTGCTGGAGGATGCGGCCAACCTCGAGTTCACAGacatcATTGTGAGCTCTAACGGAGACGCAGTGAGCAGTAAGGACATCAAGTCGTGTATCCAGCAGATCCAGGAGCTGATCGTTGTGCGTCTGAATCAAGCCGTCGCTAATAAACTCACCAGCTCCGTGGATTATTTACGCGAGAGTTTTGTGGGAACGCTGGAGCGCTGCCTGAGCAGCCTGGAGAAATCCAACATGGATGCCCATAATATCACTTCCAACCACCTcaaacagatccTGAACGCTGCCTATCATGTGGAGGTGACATTTCACTCCGGATCGTCTGTTACACGCCTCTTCTGGGAGCAGATCAAACGGATAATCCAGAGGTTGTCGTGGGTGAACCCTCCCTCCATCACGCCGGAGTGGAAGAGGAAAGTCGCTCAGGACGCCATCGAGAGTCTGAGCGCCGCCAAACTGGCCAAGAGCATCTGCTCCCAGTTCCGCACTCGACTCAACAGCTCTCACGACGCCTTCGCTGCCTCGCTCAaacagttggaggAGGGTCATACGGACCGTCTGGGTCGGACGGAGGATCTGTGGGTGCGTGTGAGGAAAGAACACGCCCCCCGACTCGCACGCCTCTCACTGGAGAGTCGCTCACTCATAGATACACTACTGTacgggaagcCGAAGCTGGGGCGGGAGTTGGGCAGGGGGCAGTATGGAGTGGTGTATTTGTGTGACAGTTGGGGAGGACATAACCCCTGCGCCCTGAAGTCAGTGGTGCCTCCCGACGACAAACACTGGAACGACCTTGCACTCGAGTTCCACTACAcacggtctttACCTAAGCATGAGCGGATGGTGGATCTTCACGGTTCTGTGATTGATCACACGTACGGCGGAGGCTCGAGCATCGCAGTGCTGCTCATCATGGAGAGACTGCACCGAGACCTGTACACGGGCctcaaggccGGTCTCTCTCTGAAGGAGCGTCTGCAGATTGCGCTGGATGTGGTGGAGGGGATTCGCTTCCTGCACAGTCAGGGGCTCGTACACAGAGACATCAAACTGAAAAACGTGCTGCTGGACAAACAGAACCGGGCCAAAATCACAGACCTCGGGTTCTGCAAACCTGAAGCCATGATGTCAGGCAGCATCGTAGGAACACCGATACACATGGCACCGGAACTGTTcacaggtaagtatgaTCACTCAGTGGACGTGTACGCGTTCGGGATCTTGTTCTGGTATCTGTGCAGCGGATCTGTTAAACTACCTGAAGCTTTTGAGAAATGTTCCAGTAAAGACCAGCTGTGGACCAACGTCAAgaaagGTTCTCGTCCTGAGCGtttgtccagttttgatgaagAGTGCTGGCAGCTGATGGAGGCGTGCTGGAACGGAGATCCGTCTCAGAGGCCGCTGCTGGGAATCGTACAGCCGAGCCTGCAAAGCATCATGGGACGTCTGTGTGACGGCGCTGACCAGAGAAACGCCAGCCTAGAAGACTctacctaacacacacacccacacactctgcAAAACCCTCCGACACACTCCACAATACACGTCCACACAGTTCAAAACACTctgactcaaacacacacacacacacacacagcgacacACTCCCATGATCAACTGACGACGATGTAAAAAGACAGAGGAGGTatatcatttgtttttgtatttccaGAAGATTCCGGTGatttgagacacacacacacacacacacacacacatacacacacttccattcTGAGGCCAACACACTATTTATGATCGGATGATCTGAGCAATACaagtttaaaaactgtttttctttgtgtttaatgtatatttatataaagtcctattacacacacactgttcttctCGTCATGCATGCTAATTGCTGCTTTGTCATAGGATTGTTACTAGATCTGAGAATTTTTAAGACTAGTGTGATTATCTTGCCGTATTATACAACAACgagaaaaaaagactttaattTTAGCTGGTGTTTAAACTTGCTAtctgaacacttttttttaataaaaaggttTTGTCGAGCTA

Function

symbol description
dstyk Predicted to enable ATP binding activity and protein kinase activity. Involved in embryonic organ development. Acts upstream of or within notochord cell vacuolation. Predicted to be located in several cellular components, including apical plasma membrane; basolateral plasma membrane; and cell junction. Is expressed in notochord. Human ortholog(s) of this gene implicated in CAKUT1 and hereditary spastic paraplegia 23. Orthologous to human DSTYK (dual serine/threonine and tyrosine protein kinase).

NR:

description
dual serine/threonine and tyrosine protein kinase-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K16288 DSTYK, RIPK5; dual serine/threonine and tyrosine protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034314229.1 True 4337 mRNA 0.52 14 571588 607621

Neighbor

gene id symbol gene type direction distance location
ccnd3 ccnd3 coding upstream 16876 548833 ~ 554712 (+)
bysl bysl coding upstream 23971 542037 ~ 547617 (+)
tmcc2 tmcc2,LOC107569750,LOC107690538,LOC107656904,LOC107572364 coding upstream 41110 522376 ~ 530478 (+)
srsf3b srsf3,srsf3b,LOC107569752,LOC107690536,LOC107656901 coding upstream 63235 503469 ~ 508353 (+)
apobec2a LOC108281085 coding upstream 75951 492045 ~ 495637 (+)
nbl1 nbl1,LOC105897883 coding downstream 80330 687951 ~ 696115 (+)
LOC113539512 LOC108281094 coding downstream 91405 699026 ~ 703360 (+)
LOC113539444 vwa1 coding downstream 117919 725540 ~ 740352 (+)
fndc10 fndc10 coding downstream 141028 748649 ~ 752616 (+)
ssu72 ssu72,LOC107690546 coding downstream 145733 753354 ~ 761217 (+)
G299618 NA non-coding upstream 6080 565276 ~ 565508 (+)
G299528 NA non-coding upstream 317356 251723 ~ 254232 (+)
G299522 NA non-coding upstream 335098 236076 ~ 236490 (+)
G299482 NA non-coding upstream 354179 209994 ~ 217409 (+)
G299486 NA non-coding upstream 366676 203812 ~ 204912 (+)
G299679 NA non-coding downstream 200538 808159 ~ 809350 (+)
G299708 NA non-coding downstream 230742 838363 ~ 838915 (+)
G299695 NA non-coding downstream 237847 845468 ~ 847722 (+)
G299719 NA non-coding downstream 265614 873235 ~ 873473 (+)
G299659 nckipsd non-coding downstream 334215 941836 ~ 943526 (+)
cdkn1a cdkn1a other upstream 50645 515540 ~ 520943 (+)
dram2b NA other upstream 211330 351588 ~ 360258 (+)
LOC113525237 LOC108281078 other upstream 382271 165615 ~ 189317 (+)
LOC117599902 NA other downstream 71296 678917 ~ 726922 (+)
mfap2 mfap2 other downstream 150888 758509 ~ 805098 (+)
LOC113539702 LOC108281106 other downstream 235232 842853 ~ 844870 (+)
fbxo42 fbxo42,LOC107719051,LOC107656898 other downstream 255637 863258 ~ 872756 (+)
erc2 erc2,LOC107582387,LOC108414413,LOC107694874,LOC107699320 other downstream 840821 1448442 ~ 1494645 (+)

Expression


Co-expression Network