G312179


Basic Information

Item Value
gene id G312179
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 112817 ~ 113108 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU369784
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Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU369784 True 267 lncRNA 0.28 2 112817 113108

Neighbor

gene id symbol gene type direction distance location
kpna5 kpna5,LOC107552832,LOC107711738 coding upstream 80962 21279 ~ 31855 (+)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695 coding upstream 104482 4175 ~ 8335 (+)
LOC117595741 LOC108280375,LOC108280376 coding downstream 104819 217927 ~ 543043 (+)
dop1a dopey1,LOC107587763,LOC107704948,LOC107597122 coding downstream 126170 239278 ~ 272041 (+)
me1 me1,LOC108280372,LOC107700750,LOC107587764,LOC107704946,LOC107716854,LOC106583951 coding downstream 224227 337335 ~ 388347 (+)
usp45 usp45 coding downstream 344033 457141 ~ 488658 (+)
LOC113543344 LOC108280269 coding downstream 392519 505627 ~ 522026 (+)
G312177 NA non-coding upstream 359 111771 ~ 112458 (+)
LOC113525271 NA non-coding downstream 3024 116132 ~ 121478 (+)
LOC113525279 NA non-coding downstream 47397 160505 ~ 164094 (+)
G312193 NA non-coding downstream 64735 177843 ~ 266537 (+)
G312194 NA non-coding downstream 66567 179675 ~ 179974 (+)
G312195 akirin1,LOC102785600 non-coding downstream 67485 180593 ~ 183042 (+)
G312172 NA other upstream 17892 93899 ~ 94925 (+)
G312171 NA other upstream 19902 92484 ~ 92915 (+)
G312191 NA other downstream 61130 174238 ~ 175541 (+)
pnrc2 pnrc2 other downstream 76431 189539 ~ 193534 (+)
snap91a snap91,LOC108280370 other downstream 161714 274822 ~ 318962 (+)
atpv0e2 LOC108280382,LOC100691746,LOC107588449,LOC107551367,LOC107706116 other downstream 300511 413619 ~ 501389 (+)
LOC113543349 iws1 other downstream 591670 704778 ~ 717291 (+)

Expression


Co-expression Network