G322072 (fuz)


Basic Information

Item Value
gene id G322072
gene name fuz
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 17480442 ~ 17481385 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU381412
GTTTATTAAGAGAAGAGCTAGGACGTCCCTGCGGAGGCTAACGGAAGGAGACAGAGCCGAGCGTTCGGCTTGGTCCGAGCAGGATCGCAGGTTCTCCACCACAGGAGACCAAAACCTGCAGACCTGCTCATTCTCGACCTGATACAGAGACGGTCTTGGACCACACAGGACACAAGCTATGGCACCAGGGAGCAGCTGGAAGCACAGCAGCCTGAGCGCGACATTAGGGCTACCTTGGGGTAAAAAGACTGGATAGTCACATGATGTTTTCCCAGGGGGCAAATTTGCGAGGGCAGAAAGAAGGACGAGCTCTTGTGGAGCGAGACGCCACCATTTCTCCGTAGCTACTGCGAGTCGACCGCGGATAAGCAAACAGCCAAACTCGCTCTCTGCAGCCCGGGTGAAGGACTCCAGCGTCTCCTGGAGGAGGTCAGGTTGAGGGAGCAGTATACAGTCAGTGCAGTGCGTCAGACCTCCCATGAGGCCCTGATCACGATCACGATCACGATCGTCCACGCCGCGTTCAAGCAGCATGTCGATTAACCGATAACAAGAGCGCAGCTCTCTCTTGAGCCGCTCTATGTTCCGTGCGTTCGCCAGCTCGTCCAGGCCCAGCACGAGCACCATGCAGTTCCAGGCGTTCTCCAGCAAACGGCGCAAGTGCAGCTCGCTCACGTTAGCGTTGCTGCTGATGCCGATGAGCATCAGGCTGTCGTGGAAGACTCTCCAGAGCACACGTCCACCTTGTTCAGTCTCGCAGCAGGACAGAGCGGCATCGTGACCCATCCCGAACATGTGCACGCCGTTCAGGGAACCAATGATGGAGAAGGGCAGCTGCTTGGCGGAGCCGCGGGAGAAGAGCGGAACGCCGCTGGACGCCGTGAGACACAGGAGCTGGACGCTCTGGGAATGAAGCATGCCGAGTGGGGAAGGGACGCCGAACA

Function

symbol description
fuz Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in cytoplasm and cytoskeleton. Human ortholog(s) of this gene implicated in neural tube defect. Orthologous to human FUZ (fuzzy planar cell polarity protein).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU381412 True 944 lncRNA 0.58 1 17480442 17481385

Neighbor

gene id symbol gene type direction distance location
zcchc2 zcchc2 coding downstream 88543 17361640 ~ 17391899 (-)
viml NA coding downstream 247306 17221945 ~ 17233136 (-)
pde1cb pde1c,pde1cb,LOC108280739,LOC108433077,LOC107757825,LOC107098293 coding downstream 261269 17118184 ~ 17219173 (-)
neurod6b LOC108280937 coding downstream 373615 17104501 ~ 17106827 (-)
trnal-uaa_4 NA coding downstream 399339 17081021 ~ 17081103 (-)
pter pter,LOC107681810 coding upstream 36658 17518043 ~ 17522229 (-)
mmp16b LOC108280576,LOC108430178,LOC107552291,LOC107566471 coding upstream 46581 17527966 ~ 17552937 (-)
cables1 cables1,LOC107681774 coding upstream 191749 17673134 ~ 17700867 (-)
gata6 gata6 coding upstream 265234 17746619 ~ 17753965 (-)
mib1 mib1,LOC107681781,LOC107550435,LOC107747519 coding upstream 304562 17785947 ~ 17841185 (-)
G321998 NA non-coding downstream 90523 17359788 ~ 17389919 (-)
G321652 NA non-coding downstream 736427 16742906 ~ 16744015 (-)
G321536 NA non-coding downstream 870885 16608816 ~ 16609557 (-)
LOC113533305 NA non-coding downstream 932941 16546239 ~ 16547501 (-)
G321505 NA non-coding downstream 960072 16518388 ~ 16520370 (-)
G322251 yme1l1b,yme1l1,LOC108430171,LOC107681681 non-coding upstream 367767 17849152 ~ 17850372 (-)
G322250 NA non-coding upstream 371248 17852633 ~ 17853837 (-)
G322310 bambib,LOC108280666,LOC108430169 non-coding upstream 509379 17990764 ~ 17992868 (-)
LOC113546439 NA non-coding upstream 862661 18344046 ~ 18346844 (-)
G322550 LOC108280742,LOC107705296,LOC107653517,LOC107564246 non-coding upstream 945348 18426733 ~ 18427069 (-)
trnal-uaa_3 NA other downstream 506672 16973527 ~ 16973770 (-)
stk11 stk11 other downstream 892626 16564708 ~ 16587816 (-)
G321462 NA other downstream 1113438 16357574 ~ 16367004 (-)
LOC113533563 NA other downstream 1756086 15687082 ~ 15724356 (-)
LOC113533479 LOC108280451 other downstream 2248862 15222778 ~ 15231580 (-)
G322080 NA other upstream 18680 17500065 ~ 17500832 (-)
LOC113546399 LOC108280496,LOC108430154 other upstream 372462 17853847 ~ 17872108 (-)
G322538 NA other upstream 912864 18394249 ~ 18394823 (-)
G322826 NA other upstream 1272387 18753772 ~ 18755593 (-)
mrpl37 mrpl37 other upstream 1503788 18985173 ~ 18994636 (-)

Expression


Co-expression Network