mrpl37 (mrpl37)


Basic Information

Item Value
gene id mrpl37
gene name mrpl37
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 18985173 ~ 18994636 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU382356
GCAGAACGAGTCCCGGGTGCTGGAGAAGCCCATCGTTGTGCAGAGCGTTGGCACCAACGGCCGTCTCTTCCAGTTTGTAATTTTCCAGCTGAACACCACGGACCTGGAGTCGGACAGCGGCGTGAAGAACCTGGCGTGGGTCGACGCCGATCAGCAGCTCTACGACTTCGCCAAGGTCCGGCCTTTCATCAAGAAGAAGGTGGTGAAGGTTCCTGCTGGTTTGTCCGGATATCAGCCAGAAACCTTCAAAAAATTCCTGGCGCTTTACCTGCACGGAGCCGCAAACTGAAACCaaccactgctttttttttttttt
>XM_034314784.1
ctccACCCACGTGACTTGGCAACATGGCTGCCTCCTGAAGGAAAGcgagacaaaatgtcaaaaccaGCTGTGTATTATTTgtgaacatttattattattattattattattattattattaattatattcttTTCAGCAGTTGTGTATAATATAAGCAGCAGGGCGATGTTTAGCGCCACGGTGCGGAGGTTAGCGCTCTCGCGCAGGATGAAGCTCTCGGCGGAAGGTGAACCGCTGCACCGCTGTCTGGCTCTGAGCTCCTGCGCGTGCGGAAAAACTCTTCCGCGTAAAAAGCCCCGGGAGCTTCCTGAGATCCAGGGACTGGAGCGCATCACCTACGCCGAGAGGAAGCACTATGTCCCCGGCTTGGCGAAGCCCAGGTTCCCGGACTGGGAGAAGGACTGGCACGACCCGGGCCGATACCGAGCTCCTGCAGCCGAGACCATGGAGCTGTACAAGCAGAGACCGTGTTACATCTACAGCCAGAGAACCAACCCgctggaagGTGTGAGACAGGCATTGTGGCTTACCAAGACTAAACTCATCTCGGGTTTTCCCGCTCAGCTCCTGGCGTTAGCGGAGAATCCGGCCAATCAGCTGGAGGATCAGGATGAACGAGTGCAGAACGCGATCAGACACGCCCGCTTCTGGGACACCAATGAACTTCGACCTCCTAAAGAGCGATACTGTCCGTCTCTGTTACACAACCTGCTCCACCTGTGCCGAGGACTGCAGGTCTCTCATCCGGCGCTCGGTCACAGGATGCTGGCGGAGAAATACATCCTGTCAGCCAGCTGGAGCAGAGGTGAGGATCAGTTCCAGGTGCGAGGGCAGAACGGCTTCCTGTTAAACAGCACGACTCCACTTCCTGCTGTGGCTGGAGACGAGGAGGTCCGCTCCACATCTGATCACGTCCTGGAGACCTTCTACCCCATCTCCCCCACCATCGACCTGCAGTGTGCCCACGTCTACCAGCTCCAAAACCACACCGGTGAGAGTTCCCCATTACCCTCAACTGCCCCTTTAATCACaaTGGAGGCTGGAGATGCACCTAAACTCCAACCCGAGCAGCTGAGAGCTAAACTCATCATGTCTTGTCATTGCTGTCTTGGGAACCTTCCAATCTGTTGAATTTCTCGTGTTTTCCTGCAGAACGAGTCCCGGGTGCTGGAGAAGCCCATCGTTGTGCAGAGCGTTGGCACCAACGGCCGTCTCTTCCAGTTTGTAATTTTCCAGCTGAACACCACGGACCTGGAGTCGGACAGCGGCGTGAAGAACCTGGCGTGGGTCGACGCCGATCAGCAGCTCTACGACTTCGCCAAGGTCCGGCCTTTCATCAAGAAGAAGGTGGTGAAGGTTCCTGCTGGTTTGTCCGGATATCAGCCAGAAACCTTCAAAAAATTCCTGGCGCTTTACCTGCACGGAGCCGCAAACTGAAACCaaccactgcttttttttttttttcctgtaagtttaatatttcataa

Function

symbol description
mrpl37 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Is expressed in several structures, including adaxial cell; eye; liver; midbrain; and musculature system. Orthologous to human MRPL37 (mitochondrial ribosomal protein L37).

NR:

description
39S ribosomal protein L37, mitochondrial

GO:

id name namespace
GO:0044444 obsolete cytoplasmic part cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
K17418 MRPL37; large subunit ribosomal protein L37

RNA

RNA id representative length rna type GC content exon number start site end site
TU382356 False 316 lncRNA 0.54 2 18985196 18986806
XM_034314784.1 True 1488 mRNA 0.53 7 18985173 18994636

Neighbor

gene id symbol gene type direction distance location
acot11a acot11 coding downstream 35857 18936784 ~ 18949316 (-)
tyw3 tyw3 coding downstream 67009 18914202 ~ 18918164 (-)
lhx8a lhx8,lhx8a,LOC108436043 coding downstream 102047 18873115 ~ 18883126 (-)
trnav-aac_21 NA coding downstream 237929 18747172 ~ 18747244 (-)
nyap2b LOC108280226 coding downstream 243606 18717300 ~ 18741567 (-)
glmna glmn coding upstream 21846 19016482 ~ 19027883 (-)
gfi1aa LOC108280759 coding upstream 49260 19043896 ~ 19053142 (-)
dipk1aa LOC108280758,LOC108436064 coding upstream 84087 19078723 ~ 19091689 (-)
LOC113546473 NA coding upstream 195678 19190314 ~ 19197494 (-)
gadd45aa gadd45a,gadd45aa,LOC108280806,LOC107716939,LOC107743369,LOC107700510,LOC107684937 coding upstream 232114 19226750 ~ 19229596 (-)
G322889 NA non-coding downstream 28556 18942578 ~ 18956617 (-)
G322849 NA non-coding downstream 172796 18812010 ~ 18812377 (-)
G322831 NA non-coding downstream 220174 18764759 ~ 18764999 (-)
G322827 NA non-coding downstream 228526 18756373 ~ 18756647 (-)
LOC117599933 NA non-coding downstream 499693 18474224 ~ 18485480 (-)
G323007 NA non-coding upstream 60851 19055487 ~ 19066748 (-)
LOC117600001 NA non-coding upstream 203424 19198060 ~ 19204380 (-)
G323088 NA non-coding upstream 223207 19217843 ~ 19220218 (-)
LOC117599938 NA non-coding upstream 235718 19230354 ~ 19275396 (-)
G323092 NA non-coding upstream 319875 19314511 ~ 19315470 (-)
G322826 NA other downstream 229580 18753772 ~ 18755593 (-)
G322538 NA other downstream 590350 18394249 ~ 18394823 (-)
LOC113546399 LOC108280496,LOC108430154 other downstream 1113065 17853847 ~ 17872108 (-)
G322080 NA other downstream 1484341 17500065 ~ 17500832 (-)
trnal-uaa_3 NA other downstream 2011403 16973527 ~ 16973770 (-)
tceanc2 tceanc2 other upstream 8603 19003239 ~ 19006379 (-)
G323011 rpl5,rpl5a,LOC102781853,LOC108436062,LOC101160347,LOC103149531,LOC106904255,LOC105920466,LOC106958298 other upstream 80364 19075000 ~ 19077917 (-)
kdm4ab kdm4a,kdm4ab,LOC108280529,LOC107564389,LOC107684932,LOC107700543,LOC107551714,LOC107743373 other upstream 481476 19476112 ~ 19507197 (-)
G323726 NA other upstream 1200658 20195294 ~ 20195672 (-)
LOC113546371 NA other upstream 1389565 20384201 ~ 20411806 (-)

Expression


Co-expression Network