abhd4 (abhd4,LOC108280801,LOC107655861)


Basic Information

Item Value
gene id abhd4
gene name abhd4,LOC108280801,LOC107655861
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 16707216 ~ 16714338 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925338.2
TCGAAAATCTACCGGAAGTAGTAGACCATCCGGGTACTTTTGATTTGGCACgcactaattctaatctcggatactatttaTGACGGATAATAGGCGAATTGAGACTCAGAATGTGTTACAACAATACTTCCGTCCTCTATGGAAACATTTGTCAGAATTATAGTTCCGGGATATGTTGTTGAATTTTCGaggaattaaaaaacaaaaaaagatacataTCCTATATCttacactgacacaaaacaatTTAGCCATCTATTATTTCTTCAgtcatataattaattaatttaattctgcatttaaaaacaaacaacagcaacaacgcAAGGCTGCTGTCTGTAGTGACATCTGGAGTCAGCTGACTGTTAAATGTCCAGGTTACATAAGAAGAGCGTGTGAAGTTACTACTGTAACGCGGTAACCTTTTGTTCCTCTGATTCCCAGCTGGAAAATTATAAAGGGTATAGGCGAACagattgttatttaatatttctggaATGTTCTTCAGCAACAGCTGGTCCTCTGAGAGCCAGAATGCAAGACGAGAATGAATTAGAGCCAAACTCTGGGAACTGGTCCTGGTGGCCATCTTGGCAGCCGACATCTATGTCCTTGCTGAAGAGTGCAGAGGCTAAAATTCTTGCCTGTATTAAGAATGAATTATGGTCCAGATTTGTCACGTTGCCAAATCAAAACAGAATATGGACCCTGACAGTGAGCAGCAAGGCAGCACGCAAACCTTCAGACCAAGCTTCTCAGATCCCTCTTGTGATGGTCCACGGCTTTGGAGGGGGCGTCGGCCTCTGGGTCCGAAACCTGGATGCTTTAAGTCGCTCGCGTCCCATCTATGCCTTTGACCTGCTTGGTTTCGGGCGCAGCTCTCGTCCTGCCTTCCCCAACGACGCCGCATTAGCTGAGGAGCAGTTCGTCAACTCCATAGAACAGTGGAGGCAGAGCCTGGGGTTGGAGCGCATGATCCTATTGGGCCACAGCCTAGGAGGTTACCTAGCAACATCATATTCCATCCAGTATCCTGAGAGAGTCAGTCACCTCATCCTAGTGGATCCCTGGGGCTTCCCGGAGAAACCACAGCCTCAGCAAGAAGGCTCATCAGGTCAGGTTCCAGAGGTCAAGAGACCGGGACCACCTCGCTGGGTGAAAGCAGTCGCATCTGTCTTGAGTTTCTTCAACCCTCTGGCCATCATCAGATTAGCAGGACCATGGGGTCCAGGGCTGGTGAACAGATTCCGGCCTGATTTCAGAAGCAAGTTTGAGGATCTTTTTGACGATAACACTATTACTGAGTATCTCTATCACTGTAACGCACAAACACCCAGtGGTGAGGTGGGATTCAGAGCCATGTGTGGATCTCTTGGCTGGGCAAAGAAGCCTATGATACAACGAGTGAACCTGCTGCCATCCTCGATGCCCATCACCATGGTGTACGGCGCACGCTCCTGGGTGGACAGTTCCACCGGCACCCACGTTGCCCAAATCAGAGGCAAGAGCCCCACACGGGTGGTGTTGATTGATGACGCCTCTCATCACGTGTATGCAGACCAGCCCGAGAAGTTCAACCAAGTGGTGGAGAACATCTGCAGTACTGTTGTCTGAATGTTAGCACAATGGAATGAAGGAcagttattgtgtgtgtgtgtgtgtgtctgtgtgtttcttatttttttgtgtgtgtccagaTGAAGTTTCATAATCTAAGGCTTTAATTAGCTCCATGTATGGGAGGCCTTGATTTTTACTTACAcacttcttactttttttttttttaataattttgatttAGTGGACTGCGCATCATTTAGAGATTTCTACAGAATTAATCTCTTGTCAAAGGTAATGGtacaaataattcataatttaatGGTTTGCAAATCCATAGTCAGTTTCATAAATCACAAGGCAGGTCCTTACATTTTCAGCTATGAGTCTAAATTAAACTTGAACAGCTTTTATATTATGATTATAAATCAAGACGCTGCCAAACGCACTAACAATGTTTGATGCAAACATCGTAACATAGTGTAACATTATGCACAAGAATACAACCCCAAGAATGTAATGCTGACTTGTTCTATGACCTTTTTTGAACTGTTATTGAAACATTCATACTTCCTGCTTGATTCATTGGTTTGACATTTTGAAAGCACATAGCTGCACATACTGTAGTAGGACATTCTGgttttagccccgcccactgccCACAGCTGTCCACTTAGATTTCACCATGGAAAATGTTACAGTATTACAATGTGTTAGGCAAAATTCTTGAGTAATCCATGTGTTTGGCAGCATAAACAGTGATACACAAATATAGCATCAAAATTGTAGGTACAtaatttgtgatttgtaataatgtaaaatagatttatagctgtataattacattatattgcATTACAGTAAAGATAGCTAAAATCCCAAGTGCAGATTTACACCTCTGACTACAGATTTGCAATTCATAAAATCACAGCTTCATTATTGTGAGACTACAATTACTTTTGACAATAAAATAGTTCCAGAAATTTCTTTCTCACTGGATTATAGTGATTGTGCCATGTTTACATGATTTTCTTTTGTGGCATTAGAAGACTACtaaatgcaatatttataaaacattgacaatattaattaattttaatttgttgtaACCATTTGCAATCCATTTCGATTTGCATCCTACCTGTTTagattatgtttgtttttatttcgaGGTAGCAGGTCATAAAACTGATGTTCAAAAAAATGATGTTTGATAATCCTTAACAGTAATGTTTTATTGTATGTTATAACACGGAAATTGGAAAATAACAGTTTGTATGTTTTAC

Function

symbol description
abhd4 Predicted to enable lysophosphatidic acid acyltransferase activity and lysophospholipase activity. Predicted to be involved in lipid homeostasis and phosphatidic acid biosynthetic process. Predicted to be active in lipid droplet and mitochondrion. Orthologous to human ABHD4 (abhydrolase domain containing 4, N-acyl phospholipase B).

NR:

description
protein ABHD4

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13698 ABHD4; abhydrolase domain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925338.2 True 2843 mRNA 0.41 8 16707216 16714338

Neighbor

gene id symbol gene type direction distance location
LOC113533139 nop9 coding downstream 29165 16665629 ~ 16678051 (-)
foxl2b foxl2,LOC108280919,LOC101448029 coding downstream 68934 16636120 ~ 16638282 (-)
LOC113533663 NA coding downstream 87482 16619633 ~ 16619734 (-)
LOC113533630 pnp5a,LOC108280898,LOC108427136,LOC107692836,LOC107747996,LOC107569603,LOC107728028,LOC108440276,LOC107703870 coding downstream 96238 16605398 ~ 16610978 (-)
LOC113533174 LOC108280837 coding downstream 105622 16594144 ~ 16601594 (-)
lrrc24 lrrc24 coding upstream 172768 16887106 ~ 16912991 (-)
eef1da eef1da,LOC108280684,LOC107663523,LOC108410862,LOC107757829,LOC107655868,LOC107600209 coding upstream 243182 16957520 ~ 16971858 (-)
adcyap1r1a adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 coding upstream 279558 16993896 ~ 17026779 (-)
fyco1b LOC108280757,LOC108433075 coding upstream 334806 17049144 ~ 17067577 (-)
trnal-uaa_4 NA coding upstream 366683 17081021 ~ 17081103 (-)
G321536 NA non-coding downstream 97659 16608816 ~ 16609557 (-)
LOC113533305 NA non-coding downstream 159715 16546239 ~ 16547501 (-)
G321505 NA non-coding downstream 186846 16518388 ~ 16520370 (-)
G321470 NA non-coding downstream 305689 16399300 ~ 16401527 (-)
LOC117595731 NA non-coding downstream 311677 16394753 ~ 16395539 (-)
G321652 NA non-coding upstream 28568 16742906 ~ 16744015 (-)
G321998 NA non-coding upstream 645450 17359788 ~ 17389919 (-)
G322072 fuz non-coding upstream 766104 17480442 ~ 17481385 (-)
G322251 yme1l1b,yme1l1,LOC108430171,LOC107681681 non-coding upstream 1134814 17849152 ~ 17850372 (-)
G322250 NA non-coding upstream 1138295 17852633 ~ 17853837 (-)
stk11 stk11 other downstream 119400 16564708 ~ 16587816 (-)
G321462 NA other downstream 340212 16357574 ~ 16367004 (-)
LOC113533563 NA other downstream 982860 15687082 ~ 15724356 (-)
LOC113533479 LOC108280451 other downstream 1475636 15222778 ~ 15231580 (-)
theg NA other downstream 1961729 14731734 ~ 14745487 (-)
trnal-uaa_3 NA other upstream 259189 16973527 ~ 16973770 (-)
G322080 NA other upstream 785727 17500065 ~ 17500832 (-)
LOC113546399 LOC108280496,LOC108430154 other upstream 1139509 17853847 ~ 17872108 (-)
G322538 NA other upstream 1679911 18394249 ~ 18394823 (-)
G322826 NA other upstream 2039434 18753772 ~ 18755593 (-)

Expression


Co-expression Network