scn12aa (scn12aa,LOC100304599,LOC108427209,LOC107655859,LOC107713684,LOC107558292)


Basic Information

Item Value
gene id scn12aa
gene name scn12aa,LOC100304599,LOC108427209,LOC107655859,LOC107713684,LOC107558292
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 14778222 ~ 14804806 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925382.2
cctggaggaaactcacacaaacacaggggaaAGTGTGTAAAACAGACAATAATCCAAGCCCAGAATCAAAcaaggaaccctggagctAAAGTGTCCTGAGGGGTTCGAGTGTTTGAAGATGGGGAGAAACCCAAACTATGGCTACACGAGTTTTGACAGTTTTGGCTGGGCCTTCCTTGCGCTCTTTAGACTAATGACACAAGACTACTGGGAAAACCTCTACCACCAGACACTACGTTCAGCTGGTAAGACCTACATGATCTTCTTCGTGCTGGTAATCTTCCTGGGCTCGTTCTACTTGGTAAACCTGATTCTGGCTGTGGTGGCCATGGCATATGAGGAGCAGAACCAGGCCACCATTGCTGAGGCTtggcaaaaagagagagaattccAGCTGGCCATGGAGCAACTTCACAGAGAGCAGAGGGCATTAGGAAAGCGAAGCAAGGAAGCTGAACTGAGTCCATTCCAAGAGATGTCTCCATCACCATTTAGTCGCAAAGAGTCCAGAGAGCATCGatccagatccagatccagatcCTATAGAACCATGTCAGAGGAAGCAGAAGATGATCCTCCTGATGAGAAGTTTGTGCACCCACTCCTAGCCACACTCTCCTCCCATCCTTTGAGCACACGGCGGGGCAGCAATAGCAGTGTGTTCACTTTCCATCTGCGCAAAAACTCTGAGGCTGATGATCACACCAGTGTCCTCTATGAGGGACGGAGTCGGGCGGGATCCACAGCGATACCATGGCACAAGCGCCGCACAAGCAGCATTAGGAGCCACTGCTCTCAAGTTGTTAAACCCAGCTTTGCCATCAATGGCCGGCTTGAACTTTTGCCGGACCAGAAGAGAATTGGTGGCATCAgcccacacacacctaccttgTTTCCTGCACACAGCATGGGAAAGGTCAAAGAGGAGCTGGCATGTTTAGAAGACCATGCTAATGAAGTCTGCAAATCCATGCAGCAAGGGCAGGTAGAAGCTCTGTCTCCCTGCAGGAAGCGAGAACTCAGCTCAGTCAGTTTCTTCAGTGATGCCATGGATGAATTTGAAGAGGCCCATCAGAAGTGCCCTTCTTGCTGGTACATGTTTGCTAAAAAGTATCTGATATGGACGTGCTCTCCAGCATGGCTTGGTCTGAAGGAGTTAGTAAACGTCATGGTGATGGATCCTTTCCTGGACCTTGCCATCACTATCTGCATTGTGCTCAACACACTCTTTATGGCATTGGAGCATTACCCCATGACTGAAGAATTTAATGGCATGCTGAGTGTGGGGAACCAGGTGTTCACTGGGATCTTCACGGCTGAGATGGTAATGAAGGTCATTGCTCTGGACCCATACTACTACTTCCAGCAAGGCTGGAACATCTTTGATGGGATTATTGTTTGCTTGAGTTTGATGGAACTTGGTCTGTCCAATGTTGAGGGATTATCAGTGCTCCGTTCATTCAGACTGCTGAGAGTCTTCAAACTGGCCAAGTCATGGCCCACTCTCAATACCCTGATAAAAATCATCGGCAACTCTGTGGGTGCCCTGGGGAATTTAACTCTTGTTCTGGCCATCATCGTCTTCATCTTTGCTGTGGTTGGCATGCAGCTGTTTGGGAAGAACTACCAGGACTGCGTGTGTAAGATCAGCACGGACTGCACTCTGCCACGTTGGCACATGAAGGACTTCTTCCACTCGTTTCTGATTGTGTTCCGTGTGCTGTGCGGTGAATGGATCGAGACGATGTGGGACTGCATGGAGGTGGCTGGCCAGCCACTCTGCATCCTCGTCTTCATGCTAGTTATGGTCATTGGAAACCTGGTGGTGCTGAACCTCTTCCTGGCTCTGTTGCTGAGCTCCTTCAGCTCTGATAACCTGTCTGCTCCAGAGGAGGATGGCGAGATGAACAACCTACAAATAGCAATCGCACGCATATATGCTGGTCTCACCTGGATCCAGGGAGTCATCAAGGACCTCTTCAGCGGCAACCTGGCCAAACGCTGGCACAAGAATAAGCAAGCCCGGGCAACCATGAAGGGTCATGGCACCAACCATCTTGAATGTAATGGGACTGTTGGGAGAATCAGCAGTTATGCAGAGAAACATGTCACTTCACAAAGGGAGGACACCTACATGACCAATCCCAGCTTGAACATATGTGTTCCAATAGCACCTGGAGAATCGGATATGGAGTTTCCTGAGGAAGAAGAGGGCACAGAGACATCAGAAGATGAAGTAAACAAACCAGAAGTGCTCAGCCTGTCAGAAGGAAGTACTGTGGATCTGAGGAATCCAGGAGAAGAAGATGAGGACACTCAGCTAGCTGGTGACACCATGGAGCCGGAAGAGTGTCTCCCTGAGTTCTGTATGCGTCGCTGTGAGTGGTGTGACATCAACACTAACCAGGGTCTTGGCCTGGTCTGGTGGAGGCTGAGGAAGACCTGCTACCAAATCGTGGAGCACAGCTGGTTTGAgaccttcatcatcttcatgaTCCTTCTCAGCAGCGGAGCTCTGGCATTTGAAGACATTTATATTGAACAGAGGAAGGTGGTGAAAGTGGTGCTAGAATACGCGGACAAAGTCTTCACCTACATCTTTGTGTTGGAGATGCTTCTGAAATGGATTGCATATGGTTTTAAGAAGTACTTCACAAACTACTGGTGCTGGCTGGATTTCCTGATAGTGGATATctctacacacacctctaaTGATAGGGTATCGCTAATTAGCTTAGTGGCTAACTCTCTGGGCTACTCAGACTTTGGAGCTATTAAATCCCTGCGGACCCTGAGAGCCCTCAGACCACTAAGAGCCCTGTCTAGATTTGAAGGAATGCGGGTGGTGGTGAATGCACTAATAGGTGCCATCCCCTCCATCATGAATGTGCTGCTGGTATGTCTGATCTTCTGGCTTATCTTCAGCATCATGGGTGTCAATCTCTTTGCCGGCAAATTTGGAAAGTGTGTGAACAGGACAGGCTACATCCATAATGCCTCAATCGTGAACAATAAATCAGATTGCCTGGCCATGAACAACACTCAGTTCTACTGGACCAGGGTGAAGGTTAACTTTGACAATGTAGGGTTGGGCTACCTCTCACTTTTACAAGTCGCAACTTTCAAAGGCTGGATGGAAATCATGTATGCAGCAGTGGATTCACGTGGGGTAGAAGAGCAGCCCATTAAGGAGGTTAACCTATACATGTACCTTTACTttgtcatcttcatcatctttgGCTCATTCTTCactctaaatttatttattggtgtAATTATAGACAACTTCAATCAGCAGAAGAGAAAGATAGGTGGACAGGACATCTTTATGACTGAGGAACAGAAAAAGTATTATAATGCGATGAAAAAACTGGGGTCAAAAAAGCCACAGAAGCCCATACCAAGGCCAACGAATATTCTGCAAGGTTTCTTCTTTGATTTGGTCTCCAAACAAGCCTTTGACATCACAATCATGATGCTCATCATCTTGAACATGATCACTATGATGCTAGAGACGGACGAGCAGTCTCCTCGAATGGAGTCCATTCTCAACAACATCAACCTGGCTTTCATTGTCATCTTCACCGCTGAATGCCTCGTTAAGATCTTTGCTCTCCGCTGCTACTTCTTCACCATCAGCTGGAACATCTTCGACTTTGTAGTGGTCATCCTGTCTATTGTTGGAATTGTTCTGGCTGATATCATCGAGAAATACTTTGTTTCTCCAACTTTATTTCGGGTGATCAGGCTGGCCAGAATAGGACGGGTCCTCAGGCTTATACGAGCAGCCAAAGGAATAAGGACGTTACTCTTTGCCTTAATGATGTCACTGCCAGCCCTCTTTAACATTGGCCTTCTGCTGTTCcttgtcatgtttatttatgcCATTTTTGGGATGGCCAACTTTGCCTATGTGAAGAAGCATGGTGGGATCGATGACATGTTTAACTTTGAAACCTTTGGAAACAGTATTATATGCCTGTTCCAGATCACCACCTCTGCTGGCTGGGACAATTTGCTGGATCCTATTCTAAGCAACTCGCCAGAGGAATGTAACCCACACATCATCAACACAGGTACTAATACAAAGGGCAATTGTGGAAACCCGTCAGTGGGAATTACTTTTTTTGTTAGCTACATCATTATCTCTTTCCTCATTGTTGTTAACATGTACATTGCCATCATCTTGGAGAACTTCAGTGTGGCCACAGAGGAGAGCACTGAGCCTCTTAGTGAGGACGATTTTGAGATGTTCTACGAGGTATGGGAGAAGTTTGATGTGGAAGCAACGCATTTCATTGAGTACTCCAAGCTTTCCAGTTTTGCAGATACACTTGCAGAGCCCCTGCGAATTGCTAAACCCAACAAGCTCAAGCTGATTTTGATGGATCTACCCATGGTGAGCGGAGACAAGATCCACTGCCTGGACATCCTGTTTGCCTTCACCAAACGTGTACTGGGTGAGTCGGGTGAGATGGATGCCCTCAAGCAGCAGATGGAGGAGAAGTTTATGATATCCAACCCTTCCAAGACCTCTTACGAACCCATTACCACCACTCTCCGGCGCAAGCAGGAGGAGGTCTCAGCCACCATAATCCAGCGGGCATACAGGAGGCACTTAGCGAGGCGGCAGATAAAGAATGCTTCCTATCTGTACCAACAACTAAACCAAGAGGCATCAGTGGACTTGGAGCATGTGCAAGAAAAGCAGGGGCTCACTGCAGATATGATTAAGGAGCATTATCACCCTGAGGAGGAGCAGGTTGAGGGGTCTCAGCACTCCTCCCCTCCTTCCTATGAGGCTGTCACTGAGGCCCCAACTGGATTGTTCCAGGTGCTGATACCTGCCACCAGGAACCTTGCAGCTTGTGAGTCTTGCAACACTGAAGAAACCTTTCTGTAAATACTACTTATTATTTCAGGAAGAACCTTTTCAAGATCGAGGTTTAAAGCACATGGTATGCTGGAGTATGCAAAGGCATATAGACAGAACTACAGTGAACTCCTTAGCAAACAGGTACATATTCCTATGATACTTCAACCATGTACAAGGCataatgcatgttattgttacttcaCTATTGACAGCCAGAAATATCAGGATCCATGGATAACAGTCTTGCACAGTGATCACCAACCCAGATCCTGAGGATCTACCATTATGTTTGCTTGATCAAGTGTAGACTGAGCAAGTCAGTAAGGTGGAGGCCCTCAAGCAGCAGACGGTAGAGTTCCTGGCTAATCCCTACTCTGTTGGAAGCAAATTTTGTAGAACGGTAGATTGTTAGGAACAGTTTTGATGATCACTGATCACGCATTCATTGTATCAGTGAATGGATGAAGGCTAAGGTCCAGAACATATTCATTAGAGTTGCAATGGCTTTTTGGTAGATAGTATTTACCTTGCAATAATTGACAATATTGATCAAGTTTtgactttttccccatttttcagCAATGATCTCAAATGTTTCTACCAAGGATTAAACATATACTATGTACCATCTGTCCCAACACTACAAAAATGTAACTAGTTATATTCTTACTTGAGGTCTATGGGACAGTgttgtgaaaatgaaaacagaaaactgaTTTCTTAACTGatgtaaatcaaattaaaaccaGAGAGAATGCGGTGTTGAAAGGTACATagaacacaattttattttgtagacACATTGCACTGCCATTGTAGCTTGGCTTTGAGTCTCAACATGTTCTGCCCAAGATATCTAAGTTGATTTTTAGGGCTATTTTCACAATGAGATCTGCAATATGTGCCTGCTGATGGGTGTCGTGTCTCTACACACATGACTCAGCTTAGGAAAACTGCTTCAGGAGCCATATTATGGTCTCTGATATACCACTGTAAGAGTTACTCTTAAGTCTCACATACACTTTAAtacttactgtatatgtgaaatGAATGGTTGAATATGCAGTGATTTCTTTGCATGAACTCAAAtatcaattcattcatttatttaacttttctaatacagacaggtgacaaattaattgaaaaacaagtgactctgttatgctgtagggggaatgtatttattttgctagCATGGTTTGTGTCCATTTGTCCACTTAAAaggaagagtcactgcaaattaataaaaagttcttctgactgactTCACCTTTATTCTATAATgcaacatttctatcctgatggaaGTGGTCTTTAGGAAGAATGATGTTTAtttctccagtacagttccagagacttgtagaatctaagGAGAGGAGCACTGAAGCTTTTTTGGCAGCTTGTGGTGGTCAAAACCTTGCTAACATACtttttgttggtttttcctttaatatgtcaCCTGTATATATCTCAAGAtgatattcttttttaaatacagtgcaATAGATTATCCATGATTATTCTCCAAGTTATGTTTAATCAAAACATTCATTAAGCATtatataaaatgacaataaagaaaaaatacatcaa
>XM_034314853.1
TTACATCATTGTTATATGAAGCAAACAAACTCCCCATTTAAAGAGTCTAAATGTAACTTAAACAATCCTCTATCAAGCAATCTGTAAAGCaacatctctctttcttctttctgacaCATTCTCAGACGGGAGTAAATTCCACAGGACAATCAGGATGAAAAGATGGCGACCATACTGCTACCAGCGGGTTCTGATGGCTTGCGCCCTTTCACTCTCGAGTCCCTTTTGGGCATTGAGCACAGGATTGCAGAAGAGCAGGCCAAGAACTCCAAGGATTCCCCAGAGTCTTCTGCGAAAGCAGATCATCCCAAAGCCCAAGCAGACCTGGAAGCAGGGAAGGTGCTTCCTCGAATCTTCGGTGACATTCCTGCAGGACTGGTAGGGGTCCCACTGGAAGACATTGACCCTTTTTACTTCAACAATCAAAAGACCTTTATAGTGCTAAATAAGGGGAAGGCCATCTTCCGCTTCAATGCCACATCGGCCCTGTACATATTTAGCCCATTTCACATCATCAGAAGAATCGCCATAAGGATACTAGTCCATTCATTGTTTAGTCTGTTCATTATGTGTACAATTTTGACCAACTGTTTCTTTATGGCCATGTCGGACCCTGCGCAATGGACCAAGTATCTGGAATATACATTCACTGGCATTTATACGTTTGAGTCGCTCATTAAGATCTTGGCGAGAGGATTCTGTATTGGACCCTTCACGTTCCTCAGAGACCCATGGAACTGGTTGGACTTCAGTGTCATTATTATGGCATATGTGACAGAGTTTGTGGATCTTGGCAATGTCTCAGCATTACGAACATTCAGAGTCCTGCGAGCCCTTAAAACCATATCTGTCATTCCAGGTCTGAAGACCATTGTGGGAGCTCTGATCCAGTCAGTAAGGAAGCTAGCAGACGTGATGATCCTGACTGTCTTCTGCCTTAGTGTCTTTGCTCTGATTGGTCTCCAGCTTTTCATGGGTCTCCTACGGCAGAAATGTGTCCGCAGCACTGCTCACTGTGTAAACTCCACCTACCCAGGAAATGGAAGCTTTTTCTGTAACAACAAGACCTGGCACTCCATAAAGGACTTCATTAGCAGTGAAGAAAACTTCTACAAAATTGAAGGAGCCAAGGACGCCTTAATATGTGGATATAGCAGTGATGCTGGAAAGTGTCCTGAGGGGTTCGAGTGTTTGAAGATGGGGAGAAACCCAAACTATGGCTACACGAGTTTTGACAGTTTTGGCTGGGCCTTCCTTGCGCTCTTTAGACTAATGACACAAGACTACTGGGAAAACCTCTACCACCAGACACTACGTTCAGCTGGTAAGACCTACATGATCTTCTTCGTGCTGGTAATCTTCCTGGGCTCGTTCTACTTGGTAAACCTGATTCTGGCTGTGGTGGCCATGGCATATGAGGAGCAGAACCAGGCCACCATTGCTGAGGCTtggcaaaaagagagagaattccAGCTGGCCATGGAGCAACTTCACAGAGAGCAGAGGGCATTAGGAAAGCGAAGCAAGGAAGCTGAACTGAGTCCATTCCAAGAGATGTCTCCATCACCATTTAGTCGCAAAGAGTCCAGAGAGCATCGatccagatccagatccagatcCTATAGAACCATGTCAGAGGAAGCAGAAGATGATCCTCCTGATGAGAAGTTTGTGCACCCACTCCTAGCCACACTCTCCTCCCATCCTTTGAGCACACGGCGGGGCAGCAATAGCAGTGTGTTCACTTTCCATCTGCGCAAAAACTCTGAGGCTGATGATCACACCAGTGTCCTCTATGAGGGACGGAGTCGGGCGGGATCCACAGCGATACCATGGCACAAGCGCCGCACAAGCAGCATTAGGAGCCACTGCTCTCAAGTTGTTAAACCCAGCTTTGCCATCAATGGCCGGCTTGAACTTTTGCCGGACCAGAAGAGAATTGGTGGCATCAgcccacacacacctaccttgTTTCCTGCACACAGCATGGGAAAGGTCAAAGAGGAGCTGGCATGTTTAGAAGACCATGCTAATGAAGTCTGCAAATCCATGCAGCAAGGGCAGGTAGAAGCTCTGTCTCCCTGCAGGAAGCGAGAACTCAGCTCAGTCAGTTTCTTCAGTGATGCCATGGATGAATTTGAAGAGGCCCATCAGAAGTGCCCTTCTTGCTGGTACATGTTTGCTAAAAAGTATCTGATATGGACGTGCTCTCCAGCATGGCTTGGTCTGAAGGAGTTAGTAAACGTCATGGTGATGGATCCTTTCCTGGACCTTGCCATCACTATCTGCATTGTGCTCAACACACTCTTTATGGCATTGGAGCATTACCCCATGACTGAAGAATTTAATGGCATGCTGAGTGTGGGGAACCAGGTGTTCACTGGGATCTTCACGGCTGAGATGGTAATGAAGGTCATTGCTCTGGACCCATACTACTACTTCCAGCAAGGCTGGAACATCTTTGATGGGATTATTGTTTGCTTGAGTTTGATGGAACTTGGTCTGTCCAATGTTGAGGGATTATCAGTGCTCCGTTCATTCAGACTGCTGAGAGTCTTCAAACTGGCCAAGTCATGGCCCACTCTCAATACCCTGATAAAAATCATCGGCAACTCTGTGGGTGCCCTGGGGAATTTAACTCTTGTTCTGGCCATCATCGTCTTCATCTTTGCTGTGGTTGGCATGCAGCTGTTTGGGAAGAACTACCAGGACTGCGTGTGTAAGATCAGCACGGACTGCACTCTGCCACGTTGGCACATGAAGGACTTCTTCCACTCGTTTCTGATTGTGTTCCGTGTGCTGTGCGGTGAATGGATCGAGACGATGTGGGACTGCATGGAGGTGGCTGGCCAGCCACTCTGCATCCTCGTCTTCATGCTAGTTATGGTCATTGGAAACCTGGTGGTGCTGAACCTCTTCCTGGCTCTGTTGCTGAGCTCCTTCAGCTCTGATAACCTGTCTGCTCCAGAGGAGGATGGCGAGATGAACAACCTACAAATAGCAATCGCACGCATATATGCTGGTCTCACCTGGATCCAGGGAGTCATCAAGGACCTCTTCAGCGGCAACCTGGCCAAACGCTGGCACAAGAATAAGCAAGCCCGGGCAACCATGAAGGGTCATGGCACCAACCATCTTGAATGTAATGGGACTGTTGGGAGAATCAGCAGTTATGCAGAGAAACATGTCACTTCACAAAGGGAGGACACCTACATGACCAATCCCAGCTTGAACATATGTGTTCCAATAGCACCTGGAGAATCGGATATGGAGTTTCCTGAGGAAGAAGAGGGCACAGAGACATCAGAAGATGAAGTAAACAAACCAGAAGTGCTCAGCCTGTCAGAAGGAAGTACTGTGGATCTGAGGAATCCAGGAGAAGAAGATGAGGACACTCAGCTAGCTGGTGACACCATGGAGCCGGAAGAGTGTCTCCCTGAGTTCTGTATGCGTCGCTGTGAGTGGTGTGACATCAACACTAACCAGGGTCTTGGCCTGGTCTGGTGGAGGCTGAGGAAGACCTGCTACCAAATCGTGGAGCACAGCTGGTTTGAgaccttcatcatcttcatgaTCCTTCTCAGCAGCGGAGCTCTGGCATTTGAAGACATTTATATTGAACAGAGGAAGGTGGTGAAAGTGGTGCTAGAATACGCGGACAAAGTCTTCACCTACATCTTTGTGTTGGAGATGCTTCTGAAATGGATTGCATATGGTTTTAAGAAGTACTTCACAAACTACTGGTGCTGGCTGGATTTCCTGATAGTGGATGTATCGCTAATTAGCTTAGTGGCTAACTCTCTGGGCTACTCAGACTTTGGAGCTATTAAATCCCTGCGGACCCTGAGAGCCCTCAGACCACTAAGAGCCCTGTCTAGATTTGAAGGAATGCGGGTGGTGGTGAATGCACTAATAGGTGCCATCCCCTCCATCATGAATGTGCTGCTGGTATGTCTGATCTTCTGGCTTATCTTCAGCATCATGGGTGTCAATCTCTTTGCCGGCAAATTTGGAAAGTGTGTGAACAGGACAGGCTACATCCATAATGCCTCAATCGTGAACAATAAATCAGATTGCCTGGCCATGAACAACACTCAGTTCTACTGGACCAGGGTGAAGGTTAACTTTGACAATGTAGGGTTGGGCTACCTCTCACTTTTACAAGTCGCAACTTTCAAAGGCTGGATGGAAATCATGTATGCAGCAGTGGATTCACGTGGGGTAGAAGAGCAGCCCATTAAGGAGGTTAACCTATACATGTACCTTTACTttgtcatcttcatcatctttgGCTCATTCTTCactctaaatttatttattggtgtAATTATAGACAACTTCAATCAGCAGAAGAGAAAGATAGGTGGACAGGACATCTTTATGACTGAGGAACAGAAAAAGTATTATAATGCGATGAAAAAACTGGGGTCAAAAAAGCCACAGAAGCCCATACCAAGGCCAACGAATATTCTGCAAGGTTTCTTCTTTGATTTGGTCTCCAAACAAGCCTTTGACATCACAATCATGATGCTCATCATCTTGAACATGATCACTATGATGCTAGAGACGGACGAGCAGTCTCCTCGAATGGAGTCCATTCTCAACAACATCAACCTGGCTTTCATTGTCATCTTCACCGCTGAATGCCTCGTTAAGATCTTTGCTCTCCGCTGCTACTTCTTCACCATCAGCTGGAACATCTTCGACTTTGTAGTGGTCATCCTGTCTATTGTTGGAATTGTTCTGGCTGATATCATCGAGAAATACTTTGTTTCTCCAACTTTATTTCGGGTGATCAGGCTGGCCAGAATAGGACGGGTCCTCAGGCTTATACGAGCAGCCAAAGGAATAAGGACGTTACTCTTTGCCTTAATGATGTCACTGCCAGCCCTCTTTAACATTGGCCTTCTGCTGTTCcttgtcatgtttatttatgcCATTTTTGGGATGGCCAACTTTGCCTATGTGAAGAAGCATGGTGGGATCGATGACATGTTTAACTTTGAAACCTTTGGAAACAGTATTATATGCCTGTTCCAGATCACCACCTCTGCTGGCTGGGACAATTTGCTGGATCCTATTCTAAGCAACTCGCCAGAGGAATGTAACCCACACATCATCAACACAGGTACTAATACAAAGGGCAATTGTGGAAACCCGTCAGTGGGAATTACTTTTTTTGTTAGCTACATCATTATCTCTTTCCTCATTGTTGTTAACATGTACATTGCCATCATCTTGGAGAACTTCAGTGTGGCCACAGAGGAGAGCACTGAGCCTCTTAGTGAGGACGATTTTGAGATGTTCTACGAGGTATGGGAGAAGTTTGATGTGGAAGCAACGCATTTCATTGAGTACTCCAAGCTTTCCAGTTTTGCAGATACACTTGCAGAGCCCCTGCGAATTGCTAAACCCAACAAGCTCAAGCTGATTTTGATGGATCTACCCATGGTGAGCGGAGACAAGATCCACTGCCTGGACATCCTGTTTGCCTTCACCAAACGTGTACTGGGTGAGTCGGGTGAGATGGATGCCCTCAAGCAGCAGATGGAGGAGAAGTTTATGATATCCAACCCTTCCAAGACCTCTTACGAACCCATTACCACCACTCTCCGGCGCAAGCAGGAGGAGGTCTCAGCCACCATAATCCAGCGGGCATACAGGAGGCACTTAGCGAGGCGGCAGATAAAGAATGCTTCCTATCTGTACCAACAACTAAACCAAGAGGCATCAGTGGACTTGGAGCATGTGCAAGAAAAGCAGGGGCTCACTGCAGATATGATTAAGGAGCATTATCACCCTGAGGAGGAGCAGGTTGAGGGGTCTCAGCACTCCTCCCCTCCTTCCTATGAGGCTGTCACTGAGGCCCCAACTGGATTGTTCCAGGTGCTGATACCTGCCACCAGGAACCTTGCAGCTTGTGAGTCTTGCAACACTGAAGAAACCTTTCTGTAAATACTACTTATTATTTCAGGAAGAACCTTTTCAAGATCGAGGTTTAAAGCACATGGTATGCTGGAGTATGCAAAGGCATATAGACAGAACTACAGTGAACTCCTTAGCAAACAGGTACATATTCCTATGATACTTCAACCATGTACAAGGCataatgcatgttattgttacttcaCTATTGACAGCCAGAAATATCAGGATCCATGGATAACAGTCTTGCACAGTGATCACCAACCCAGATCCTGAGGATCTACCATTATGTTTGCTTGATCAAGTGTAGACTGAGCAAGTCAGTAAGGTGGAGGCCCTCAAGCAGCAGACGGTAGAGTTCCTGGCTAATCCCTACTCTGTTGGAAGCAAATTTTGTAGAACGGTAGATTGTTAGGAACAGTTTTGATGATCACTGATCACGCATTCATTGTATCAGTGAATGGATGAAGGCTAAGGTCCAGAACATATTCATTAGAGTTGCAATGGCTTTTTGGTAGATAGTATTTACCTTGCAATAATTGACAATATTGATCAAGTTTtgactttttccccatttttcagCAATGATCTCAAATGTTTCTACCAAGGATTAAACATATACTATGTACCATCTGTCCCAACACTACAAAAATGTAACTAGTTATATTCTTACTTGAGGTCTATGGGACAGTgttgtgaaaatgaaaacagaaaactgaTTTCTTAACTGatgtaaatcaaattaaaaccaGAGAGAATGCGGTGTTGAAAGGTACATagaacacaattttattttgtagacACATTGCACTGCCATTGTAGCTTGGCTTTGAGTCTCAACATGTTCTGCCCAAGATATCTAAGTTGATTTTTAGGGCTATTTTCACAATGAGATCTGCAATATGTGCCTGCTGATGGGTGTCGTGTCTCTACACACATGACTCAGCTTAGGAAAACTGCTTCAGGAGCCATATTATGGTCTCTGATATACCACTGTAAGAGTTACTCTTAAGTCTCACATACACTTTAAtacttactgtatatgtgaaatGAATGGTTGAATATGCAGTGATTTCTTTGCATGAACTCAAAtatcaattcattcatttatttaacttttctaatacagacaggtgacaaattaattgaaaaacaagtgactctgttatgctgtagggggaatgtatttattttgctagCATGGTTTGTGTCCATTTGTCCACTTAAAaggaagagtcactgcaaattaataaaaagttcttctgactgactTCACCTTTATTCTATAATgcaacatttctatcctgatggaaGTGGTCTTTAGGAAGAATGATGTTTAtttctccagtacagttccagagacttgtagaatctaagGAGAGGAGCACTGAAGCTTTTTTGGCAGCTTGTGGTGGTCAAAACCTTGCTAACATACtttttgttggtttttcctttaatatgtcaCCTGTATATATCTCAAGAtgatattcttttttaaatacagtgcaATAGATTATCCATGATTATTCTCCAAGTTATGTTTAATCAAAACATTCATTAAGCATtatataaaatgacaataaagaaaaaatacatcaa

Function

symbol description
scn12aa Predicted to enable voltage-gated sodium channel activity. Acts upstream of or within heart looping and regulation of heart contraction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of voltage-gated sodium channel complex. Is expressed in nervous system and pericardial region.

NR:

description
PREDICTED: sodium channel protein type 4 subunit alpha-like

GO:

id name namespace
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0006814 sodium ion transport biological_process
GO:0001947 heart looping biological_process
GO:0001518 voltage-gated sodium channel complex cellular_component
GO:0005248 voltage-gated sodium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925382.2 False 6472 mRNA 0.45 21 14788409 14804806
XM_034314853.1 True 7524 mRNA 0.45 26 14778222 14804806

Neighbor

gene id symbol gene type direction distance location
chico chico,aes,LOC108280588,LOC108427216,LOC107558286,LOC107667856,LOC106574496 coding upstream 149373 14602769 ~ 14628849 (+)
gna11b gna11b,LOC103033252,LOC108280682,LOC108427217,LOC105889474,LOC107600186,LOC107667855,LOC107696027,LOC107558284 coding upstream 183901 14550309 ~ 14594321 (+)
LOC113533212 LOC108280212,LOC108427118,LOC568754,LOC107558277,LOC107667866,LOC107729992,LOC107600185,LOC107750900,LOC107696035 coding upstream 290839 14481676 ~ 14487383 (+)
ralbp1 ralbp1,LOC107696059,LOC107667860 coding upstream 327783 14438363 ~ 14450439 (+)
sirt6 sirt6,LOC107667852 coding upstream 406029 14344594 ~ 14372193 (+)
LOC113533364 epb41l3,LOC108280699,LOC108427206 coding downstream 313687 15118493 ~ 15139852 (+)
LOC113533638 apcdd1,LOC108280926 coding downstream 370969 15175775 ~ 15191239 (+)
ncstn ncstn coding downstream 426741 15231547 ~ 15240528 (+)
si:dkey-10o6.2 LOC108280456,LOC108280457,LOC107746564,LOC107656853,LOC107715131,LOC107656841 coding downstream 437223 15242029 ~ 15248003 (+)
nectin4b LOC108280452 coding downstream 450384 15255190 ~ 15268619 (+)
G320386 NA non-coding upstream 106553 14613999 ~ 14671669 (+)
G320371 NA non-coding upstream 217609 14549223 ~ 14560613 (+)
G320212 NA non-coding upstream 319213 14458672 ~ 14459009 (+)
G320211 NA non-coding upstream 321765 14455383 ~ 14456457 (+)
G320210 NA non-coding upstream 324271 14438716 ~ 14453951 (+)
G320797 LOC108280451 non-coding downstream 419065 15223871 ~ 15226072 (+)
G320843 NA non-coding downstream 505798 15310604 ~ 15310809 (+)
G320848 NA non-coding downstream 535760 15340566 ~ 15341207 (+)
G320935 NA non-coding downstream 657048 15461854 ~ 15463232 (+)
G320949 NA non-coding downstream 739091 15543897 ~ 15546092 (+)
tle2c zgc:136336,LOC108280589,LOC108427215 other upstream 111714 14637781 ~ 14666508 (+)
rab31 rab31 other upstream 311469 14386238 ~ 14466753 (+)
zmp:0000000521 zmp:0000000521,LOC108280721,LOC107696078,LOC108442439,LOC107596226,LOC105888700 other upstream 651210 14080249 ~ 14127012 (+)
LOC113533270 mtcl1 other upstream 880308 13837433 ~ 13897914 (+)
sema6ba si:ch211-168n16.1,LOC108280795,LOC108433102,LOC107713651,LOC107600229,LOC107757803,LOC107662975,LOC107698499,LOC105903857 other upstream 1623695 13021142 ~ 13154527 (+)
ly97.3 LOC108280687 other downstream 22436 14827242 ~ 14828778 (+)
LOC113533366 NA other downstream 258915 15063721 ~ 15066371 (+)
LOC113533365 LOC108280254 other downstream 277432 15082238 ~ 15101461 (+)
fcer1gl LOC100304589 other downstream 444709 15249515 ~ 15253555 (+)
si:dkeyp-68b7.7 LOC108280928 other downstream 494255 15299061 ~ 15303288 (+)

Expression


Co-expression Network