abhd17aa (abhd17aa,LOC108280794,LOC108433103,LOC105904035,LOC107757810,LOC107698472,LOC107599293,LOC107600230,LOC106584389)


Basic Information

Item Value
gene id abhd17aa
gene name abhd17aa,LOC108280794,LOC108433103,LOC105904035,LOC107757810,LOC107698472,LOC107599293,LOC107600230,LOC106584389
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 13004794 ~ 13014554 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925860.2
TGAAATCTAAGCTTCACACTATGTGGAGCTTGTCATTACGGTTAGCAAAACAGCTATTCAAAGCGGATGACTTCCTGCAGTTTATTCCTAAGATGATTTTAGTTACACGGGAAAAAGATTGGGAACCGTGTTTAGTGTCTTGGCATGTATAGATACATAAAAACCTCTCAGAGATTCTGCTAGTTTTCGGTTCTTCCAGCTTGTCTGTAACTCGGTGCTGGGAAGATGAATGGATTGTCAGTCAGCGAGCTATGCGGCCTTTTCTGTTGCCCTCCTTGCCCAAGTCGGATTGCAGCGAAACTGGCCTTCCTACCCCCAGAGCCCACTTACACTTTACTGCCCGAACTGGACTCGCCCCCACCCATGACCTCCAACCAGAGCACCTCGGGCCTGCGTTCTCGGCTGAGccggagaggaggaggaggagacagaGGTGGAGAGGGCAGGTGGAAGCTCCATCTGTCAGAGCGAGCTGAGTTCCAGTACTCCCAACGAGAGCTGGACAGGACAGAAGTCTTCCTGACTCGCTCTAGTCGTGGGAACAAAGTGGGATGCATGTACATCCGCTGTGCCCCCACAGCCAGGTACACGGTGCTGTTCTCCCACGGTAACGCTGTGGATCTGGGTCAGATGAGTAGCTTCTACATCGGCCTGGGCACACGCATCAACTGCAACATCTTCTCTTACGACTACTCGGGTTATGGAGCCAGCACGGGGAAGCCGTCTGAGAAGAACCTCTATGCTGACATAGACGCTGCCTGGCATGCGCTGCGCACCAGATATGGGATCAGTCCTGAGAACATCATCCTTTATGGTCAGAGTATTGGCACGGTGCCCACGGTGGACCTAGCGTCGCGGTATGAGTGTGCTGCCGTGGTCCTTCACTCCCCCCTCACCTCGGGTATGAGAGTGGCCTTCCCTGACACCAAGAAGACCTACTGCTTTGACGCCTTTCCGAACATCGAGAAGGTGTCAAAGATCACGTCTCCAGTGCTGATCATCCACGGCACCGAGGATGAGGTGATTGATTTCTCGCACGGCCTTGCCCTGTTCGAGCGCTGCCCCAAGGCTGTGGAGCCTCTGTGGGTGGAGGGAGCCGGCCACAACGACATCGAGCTCTACAGCCAGTACCTGGAGCGCCTGCGCCGCTTCATCAGCCAGGAACTGACCGCACAGTATGCCTGAAAATCCAGCAGTTCAAAGCTCAGTCCAAGTGAAACGAACACTCCAGTGTCAATTTGAGGGCCTGCTTCAACGTTTTCTACTCTGTAGGCTGGTAAATATTAACCTGTAGACCTGGATGGTTCAACATCTTGAAGCAGGACCTTGTGGGTCCAGTATAGCAGGGCAAAAATCACCACAAACTGTATTGTCATTATTTCTtcgtattattgtattattatattattatttcttttgctCAAGGCATCTACAGAGAGACTGCCATAAGTGCAATTTCTTAGATTAGTTCTTGTTTGGTTCAATATTTTGGGCTGGAGGATTTAATTTTCTGCTCCTTCCTGTATGTATGTGCTCTCTGCTGGACAGATTGGGTGTTTTGTCTGACCTTGTGGAGACCATTATATGGGTCAAGTGTGTATGTACTGATTTATTACAGACTCTTTCAAAAGCTTTTGGATCTCAAGCACTTCTTTTGCCCCctgttcagttttgtttgtcACTTCTTAATGCATTTGGATTGCCAGCCAGCCAGCATCTTGTGTGTGGACATGAACTGAGCGATAAATTTAGGCAGCAAGCAATATAACTTGGGTTACTGTGAATACAACACTAAGGCAACcttgatacaaaaaaaaaaaaaatagttccaTTTCCCCCATTTCCCCTCCCATGGAACAACTGAACTGAAAAGAATGACGTCCGTTTTCCTTTAACGCAGTTAAATTCACATGAATGTAGCTTTCATCTTTCATTCTCCACAATGATGCGTAGATTATGAGTAACTAGTGGTTTGTGTTATCTTTCCATCTGAGCTTCTCCGTCAGTGTGCTTTCCTCTGACTCTCATTCATGTCTTTCCTGAACTCTTTAAATCTTGTATATATTTCCCTAAATGCTCTGTCTCACACGTtcacactctgtctcactgtgaCACTATACGCATTAACTATTCATACATCATCTCAGTGCCTCACCTTTTAATTCACAAGTTTTCTTGTGAATTAAGAATGGGTACTTCTGTTCTCTCTTCCGAACTCTCCGACGTTGTTACACCCTTTCCTCTTTCTCATAGCGGCAGTGTCTGTAAAGCTTAAGAGATGGTGAGAGATTTTGAATATAAACgcataaaacaaaaacacattgcTAATTTGTAAGATATCCTTCCTCTTTTTGGTATTTCTTATTgcagacagttttttttagtATTCTATTTATGACATTAACATTTCTCGCAGTTTAGCTATACTTAACGCATTTTAAGAACATTACGAAGAACTTGCAAATCTATTTTTCTAAGAGTAAGTTTTTGCTCTAGTGCTCTAGTTTTATCTAAATCAGAGCCATTCTTAAGGGACTGGACAATAGTTTTATTGCTATTTGGTTGAAGTGGAAAGAGGATAATTCAGCCCTATCCCTAAGATAATTAGATTTGCCTTTGTCATCAATCTAAAGCCGCTTTTGAACATGACTGCCTGAATGGCGAGATCTTCTAATTTCACAAACTCAATTTAAATTTCCAAAGTAAAATACCATGGGTTTTTGTCTCAAAACGCAATAACATCAAAATTACATGTATTATAGGTGTAAGCTGCAGTCTCACAGTGTGTGTACTCACACCCTCTACACTCCAAATGGCAATAAACCTAAACTTCATGATGCAGATGTttggaaaaaacattttagaaaccctcatatttaaaatgattaatgtattattctttttttttttttttttttttttttccccagctgcAGCCATGTATAAATGTGTAGTCATGTTTCCGTTGGTGAAAGAAGCAACtgaacttttttccttttgtgtaTCCTTTTCTTAGCTGAAGAATGTATGTGCTGTAATGTAACTGATTAATAAAAGTGATGATGACTATG
>XM_026925861.2
TTATCTCGTTCAGGTTGACACCCTACAATCTGTCAGTGAAACTCATTCATGGAATATCAGCCTGTAACTCCTATAGTAAGACTTATAGTTCTTCCAGCTTGTCTGTAACTCGGTGCTGGGAAGATGAATGGATTGTCAGTCAGCGAGCTATGCGGCCTTTTCTGTTGCCCTCCTTGCCCAAGTCGGATTGCAGCGAAACTGGCCTTCCTACCCCCAGAGCCCACTTACACTTTACTGCCCGAACTGGACTCGCCCCCACCCATGACCTCCAACCAGAGCACCTCGGGCCTGCGTTCTCGGCTGAGccggagaggaggaggaggagacagaGGTGGAGAGGGCAGGTGGAAGCTCCATCTGTCAGAGCGAGCTGAGTTCCAGTACTCCCAACGAGAGCTGGACAGGACAGAAGTCTTCCTGACTCGCTCTAGTCGTGGGAACAAAGTGGGATGCATGTACATCCGCTGTGCCCCCACAGCCAGGTACACGGTGCTGTTCTCCCACGGTAACGCTGTGGATCTGGGTCAGATGAGTAGCTTCTACATCGGCCTGGGCACACGCATCAACTGCAACATCTTCTCTTACGACTACTCGGGTTATGGAGCCAGCACGGGGAAGCCGTCTGAGAAGAACCTCTATGCTGACATAGACGCTGCCTGGCATGCGCTGCGCACCAGATATGGGATCAGTCCTGAGAACATCATCCTTTATGGTCAGAGTATTGGCACGGTGCCCACGGTGGACCTAGCGTCGCGGTATGAGTGTGCTGCCGTGGTCCTTCACTCCCCCCTCACCTCGGGTATGAGAGTGGCCTTCCCTGACACCAAGAAGACCTACTGCTTTGACGCCTTTCCGAACATCGAGAAGGTGTCAAAGATCACGTCTCCAGTGCTGATCATCCACGGCACCGAGGATGAGGTGATTGATTTCTCGCACGGCCTTGCCCTGTTCGAGCGCTGCCCCAAGGCTGTGGAGCCTCTGTGGGTGGAGGGAGCCGGCCACAACGACATCGAGCTCTACAGCCAGTACCTGGAGCGCCTGCGCCGCTTCATCAGCCAGGAACTGACCGCACAGTATGCCTGAAAATCCAGCAGTTCAAAGCTCAGTCCAAGTGAAACGAACACTCCAGTGTCAATTTGAGGGCCTGCTTCAACGTTTTCTACTCTGTAGGCTGGTAAATATTAACCTGTAGACCTGGATGGTTCAACATCTTGAAGCAGGACCTTGTGGGTCCAGTATAGCAGGGCAAAAATCACCACAAACTGTATTGTCATTATTTCTtcgtattattgtattattatattattatttcttttgctCAAGGCATCTACAGAGAGACTGCCATAAGTGCAATTTCTTAGATTAGTTCTTGTTTGGTTCAATATTTTGGGCTGGAGGATTTAATTTTCTGCTCCTTCCTGTATGTATGTGCTCTCTGCTGGACAGATTGGGTGTTTTGTCTGACCTTGTGGAGACCATTATATGGGTCAAGTGTGTATGTACTGATTTATTACAGACTCTTTCAAAAGCTTTTGGATCTCAAGCACTTCTTTTGCCCCctgttcagttttgtttgtcACTTCTTAATGCATTTGGATTGCCAGCCAGCCAGCATCTTGTGTGTGGACATGAACTGAGCGATAAATTTAGGCAGCAAGCAATATAACTTGGGTTACTGTGAATACAACACTAAGGCAACcttgatacaaaaaaaaaaaaaatagttccaTTTCCCCCATTTCCCCTCCCATGGAACAACTGAACTGAAAAGAATGACGTCCGTTTTCCTTTAACGCAGTTAAATTCACATGAATGTAGCTTTCATCTTTCATTCTCCACAATGATGCGTAGATTATGAGTAACTAGTGGTTTGTGTTATCTTTCCATCTGAGCTTCTCCGTCAGTGTGCTTTCCTCTGACTCTCATTCATGTCTTTCCTGAACTCTTTAAATCTTGTATATATTTCCCTAAATGCTCTGTCTCACACGTtcacactctgtctcactgtgaCACTATACGCATTAACTATTCATACATCATCTCAGTGCCTCACCTTTTAATTCACAAGTTTTCTTGTGAATTAAGAATGGGTACTTCTGTTCTCTCTTCCGAACTCTCCGACGTTGTTACACCCTTTCCTCTTTCTCATAGCGGCAGTGTCTGTAAAGCTTAAGAGATGGTGAGAGATTTTGAATATAAACgcataaaacaaaaacacattgcTAATTTGTAAGATATCCTTCCTCTTTTTGGTATTTCTTATTgcagacagttttttttagtATTCTATTTATGACATTAACATTTCTCGCAGTTTAGCTATACTTAACGCATTTTAAGAACATTACGAAGAACTTGCAAATCTATTTTTCTAAGAGTAAGTTTTTGCTCTAGTGCTCTAGTTTTATCTAAATCAGAGCCATTCTTAAGGGACTGGACAATAGTTTTATTGCTATTTGGTTGAAGTGGAAAGAGGATAATTCAGCCCTATCCCTAAGATAATTAGATTTGCCTTTGTCATCAATCTAAAGCCGCTTTTGAACATGACTGCCTGAATGGCGAGATCTTCTAATTTCACAAACTCAATTTAAATTTCCAAAGTAAAATACCATGGGTTTTTGTCTCAAAACGCAATAACATCAAAATTACATGTATTATAGGTGTAAGCTGCAGTCTCACAGTGTGTGTACTCACACCCTCTACACTCCAAATGGCAATAAACCTAAACTTCATGATGCAGATGTttggaaaaaacattttagaaaccctcatatttaaaatgattaatgtattattctttttttttttttttttttttttttccccagctgcAGCCATGTATAAATGTGTAGTCATGTTTCCGTTGGTGAAAGAAGCAACtgaacttttttccttttgtgtaTCCTTTTCTTAGCTGAAGAATGTATGTGCTGTAATGTAACTGATTAATAAAAGTGATGATGACTATG

Function

symbol description
abhd17aa Predicted to enable palmitoyl-(protein) hydrolase activity. Predicted to be involved in protein depalmitoylation and regulation of postsynapse organization. Predicted to be active in endosome membrane and plasma membrane. Orthologous to human ABHD17A (abhydrolase domain containing 17A, depalmitoylase).

NR:

description
PREDICTED: alpha/beta hydrolase domain-containing protein 17B-like

GO: NA

KEGG:

id description
K01076 ABHD17; abhydrolase domain-containing protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925860.2 True 3071 mRNA 0.43 5 13004794 13014554
XM_026925861.2 False 2969 mRNA 0.44 5 13005779 13014554

Neighbor

gene id symbol gene type direction distance location
LOC113533117 LOC108280188,LOC108433071 coding upstream 21945 12968314 ~ 12982849 (+)
LOC113533470 NA coding upstream 207970 12782537 ~ 12796824 (+)
LOC113533522 NA coding upstream 576263 12416510 ~ 12428531 (+)
pax3a pax3a,LOC108280216,LOC108439877 coding upstream 1381949 11596699 ~ 11622845 (+)
trnag-ccc_6 NA coding upstream 1431897 11572827 ~ 11572897 (+)
rorcb rorcb,LOC108280913,LOC108433101,LOC107757806,LOC107698501 coding downstream 171377 13185931 ~ 13216057 (+)
sh3gl1a sh3g1,LOC108433099 coding downstream 202936 13217490 ~ 13241937 (+)
stap2a stap2a,LOC108280350,LOC108433098,LOC107713653,LOC107698505,LOC107757807 coding downstream 239056 13253610 ~ 13265447 (+)
sema4e LOC108280345 coding downstream 253200 13267754 ~ 13285252 (+)
prkab2 prkab2,LOC108280523,LOC108433095,LOC102781441,LOC101470867,LOC100694198 coding downstream 284954 13299508 ~ 13305437 (+)
G319198 NA non-coding upstream 199062 12805522 ~ 12805732 (+)
LOC117599962 NA non-coding upstream 241067 12761836 ~ 12763727 (+)
G319087 NA non-coding upstream 376904 12627675 ~ 12627890 (+)
LOC117599992 NA non-coding upstream 379040 12622299 ~ 12625754 (+)
LOC117599989 NA non-coding upstream 432387 12559513 ~ 12572407 (+)
G319276 NA non-coding downstream 7773 13022327 ~ 13023135 (+)
G319286 NA non-coding downstream 22468 13037022 ~ 13037736 (+)
G319314 NA non-coding downstream 72709 13087263 ~ 13087475 (+)
G319318 NA non-coding downstream 87793 13102347 ~ 13102608 (+)
G319330 NA non-coding downstream 125720 13140274 ~ 13140482 (+)
G319170 NA other upstream 201775 12765055 ~ 12803019 (+)
G318439 NA other upstream 1535295 11467299 ~ 11469499 (+)
per2 LOC108280459,LOC108439864 other upstream 1540025 11399884 ~ 11464769 (+)
camk2n1a camk2n2,camk2n1a,LOC107659987,LOC107600060,LOC107557885 other upstream 2270706 10730346 ~ 10734088 (+)
eif4e2 eif4e2,LOC107600102,LOC107579667,LOC107749152,LOC107730458 other upstream 2435887 10563821 ~ 10568907 (+)
sema6ba si:ch211-168n16.1,LOC108280795,LOC108433102,LOC107713651,LOC107600229,LOC107757803,LOC107662975,LOC107698499,LOC105903857 other downstream 6588 13021142 ~ 13154527 (+)
LOC113533270 mtcl1 other downstream 822879 13837433 ~ 13897914 (+)
zmp:0000000521 zmp:0000000521,LOC108280721,LOC107696078,LOC108442439,LOC107596226,LOC105888700 other downstream 1065695 14080249 ~ 14127012 (+)
rab31 rab31 other downstream 1371684 14386238 ~ 14466753 (+)
tle2c zgc:136336,LOC108280589,LOC108427215 other downstream 1623227 14637781 ~ 14666508 (+)

Expression


Co-expression Network