myo10 (myo10,LOC107602648,LOC107749189)


Basic Information

Item Value
gene id myo10
gene name myo10,LOC107602648,LOC107749189
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 8193755 ~ 8257661 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026941173.2
gaGTCACCGCGAGCTTGCAGCCTGGCTGTAGACGGAGCCCTCGCTGTTTACCGATGCGCGCGCCGCCACGCCGCACAGAGTGACCTCGCGCGCACAGTGGACGCGGATCCCCGGAATTCCAGCGCACGTGAACTCTGCTGTTGTCTCGGGAGACTCGCGAACATCTGTAACCTCTGAAACAAAGAAGACGCgcgtgcgtctgtgtgtgtgtgtgtgtgggaaacagggagagagagagagagagagagagagaggagactgCGAGCTGGAAGTTGAGCCTCTGAAATGGAGTGAGGATTTACCAGCTGTAATTCCAGCCCTGAGACTGAAGTCCGCCTGCTCTCCTGGCACTAACCAGGACCATGGATAACTTTTTTACAGAGggTTCTCGTGTGTGGCTCTGGGAGGAGGATCAGTATTGGGCCAGCACCGTGGACTCCTGCTCAGGAGGCATTGTGGTTTTCCGCACCGACTATGGACAGgtgtacACCTATAAGCAGAATGCTTTGAGCAGGCAGAGAGTGTATGAGATGCAcagtagcagtgtgtgtggtgtggaggACATGGCAGCGCTGCAGGACCTCCATGAGGGAGCTATCCTACACAACCTGCACCTGAGATACACACAGCGCAGTATATACACGTATATAGGGTCTATATTAGCAGCAGTGAACCCGTACCAGCAGTTGCCGGAGCTTTACAATGTGTCGGCGGTGGAGAGCTACAGTCGACATCACCTGGGGGAAATCCCGCCTCACATCTACGCCATCGCCAATGAGTGCTACCGCTCGCTCTGGAAACGCAACAACAATCAGTGTGTGCTCATTAGtgGGGAGAGTGGTGCAGGTAAGACGGAGAGTACCAAGGTGATTCTGCGGTTCTTGTCTTTAATGAGTCAGCAGAGCCTAGAACTTTCCGCAAGACACACAACATCCCACGTGGAGGAGGCGCTCCTGGAGAGCAgTCCTATAATGGAGGCATTTGGAAATGCTAAGACGGTGTATAATAATAACTCCAGCCGCTTCGGGAAGTTCATCCAGCTTCACTTTAGCCAGCGGGGAAACATTCAGGGAGGAAAGATTGTGGACTACTTATTAGAGAAGAATCGTGTTGTGCGGCAGAATCCCGGCGAGAGGAACTACCATATATTCTACGCTTTACTGGCAGGAAGCAGTGCAGAACAGAGGGaGGAGTTTTCTCTGCTGCCCGCTGAGAGTTTTCATTACCTGAATCAGTCTGGCTGTGTGAGGGATCACACcatcagtgacacacacacatttcaggaaGTGCTGaatgCCTTGCGGACCATGCACTTTGGGGAGGAGAGTATCTGTGAGGTTATGAGGCTTTTAGCTGGAATTCTGCACCTTGGGAACATTGAATTCGCCACAGCCGGAGGAGCTCAGGTCTCCTCCAAAGCAGctCTCAGCAGTGCAGCGGAACTGTTGGGTTTGGACTGCACACAGCTGGCTGAAGTTCTGACACACAGATCCATGATCCTTCGAGGAGAAGAGATCAGCACTCCACTTACTGTAGAACAGGCTGTCGACTCTCGAGACTCTATGGCTATGGCTCTCTACTCTCAGTGCTTCACCTGGATCATCCACAAACTCAACAAGCGTATCCACGGCAACGACAACTTCAAGTCCATTGGCATCCTGGACATTTTTGGCTTTGAGAACTTTGAGGTGAATCGGTTTGAGCAGTTCAACATTAACTACGCCAATGAGAAGCTGCAGGAGTATTTCAATAAGCACATCTTCTCCCTGGAGCAGCTGGAGTACAACAGggaaggACTCATCTGGGATGATGTTAACTGGATGGACAATGGAGAATGTCTGGATCTCATAGAGAAGAAACTGGGTTTGTTGGCTCTGATGAATGAAGAAAGTCATTTTCCCAAAGCCACTGATGCTACGTTGCTGGAGAAGCTCCACAGCCAACACTCTAAAAACCCTTTCTACACAAAGCCTCGAGTTGCTGTGCACTTCTTTGGAGTGAAGCACTATGCAGGAGAGGTGGTGTATGACGTGAGAGGGATCctggagaaaaacagagataCTTTCAGAGATGACATCCTCAACTTACTCAGGgatagcagcTTGGATTTTGTGTATGATCTGTTTGAGAGGATGAGTAGCAGGTGTGGGCAGGACATGATGAAAAGCAGCTCACAGCACCGCAGGCCAACAGTCAGCTCCCAGTTTAAGAATTCTTTGCACTCCCTGATGTCCACCCTCAGCACCTCCAACCCTTTCTTTGTGCGCTGCATCAAACCCAACAACAAcaagaTGCCAGATCGTTTTGATCACTCTGTGGTGCTGAACCAGTTGCGGTATTCTGGCATGCTGGAGACAGTGAGGATCCGGCGTGCTGGCTTTCCTGTTCGGAGAACCTTCCAGGATTTCTGCACCAGgtaCTACGTGTTAATGAGAGGTGTGGCCAGGTGTGATGACCCCAAGGAGGCGTGTCTGCAGGTGCTCCGCCTCTACGACAGCAGTAGTGCAGAATGGCAGCTGGGAAAGACGAGGGTTTTCCTAAGGGAGAGTCTGGAGCTGCGATTGGAAAAGAAGCGAGAGGAAGAAGTGCTTCAGGCTGCAGCCATTATACAGGCCTACCTGCTGGGATACAGGGCacgGAGGCAGTACAAGCGgctgctgcagtgtgtgctgGTGATCCAGAAAAACTGGAGGGCACTTTTCTGGCGCAGGCGCTACTTGATGCTTCGCTGGGCCTCCATCACACTCCAAAAAAGAGTTAGAGGTCAAAGGGCACGGCAGCTCTACACACAGCTACttgaggagaggaaaagaagggTGGAGGAGGAGCGGAGAcaaagagaagaggaggaggagcgagAGAGagagagacagagactggaGATGGAGCGGAAGGCTCGAGAGGCAGAAGAGGCACTGAGAGTAGAGGAGGCTCTgagaattgagagagagaggaagattcTCAGAAATGGTCTGGAGCAAACATCTGTTTTGGCTGAGAGCAAGCGCTCAGAGCAGCCATTATTGGATGAGGTTTTTGAGGAAGAAGCCCGTCCCAATGAGGCTTCACAAGTGGAGGAAATCCTGCGTCTGGAGCGTGAAATTGAGGGTCTGCGGAGGCAGAAAGAGACACGGGAGCAGACTCTGACGGCACATTCTCTGGCACGTCTGCAGCACCTGCGTGATCAGGAGTTGCTCAGGCTGGAGGAAGAGGCCTGCAAGGCAGCGCAGCAGTTCCTCTCCTCGCTCAACTTCCACGAGATCGATGAGTGTGTGCGCAACATCGAGAGCACCTTAGTGTTGCAGGATTGCTCAGAAGAAACTGAacaagagaggaggagaggtggggatgaggaggaggtggaTGAAGGATTGGGAGGGGATGAGGAAGGCTTTAAAGATTCACCGAACCCCAGTGAGCACGGCCACTCGGACGGCCAGCGCACCAGTGGGATCCGCACCAGTGACGACTCGTCTGAGGAGGACCCGTACGCCAATGACCGCGTGGCTCCACCCCCAGCACCACCCACAACTGTGCCCTCAGCCTATCATGCACTAGCCTGTATCAGGGACACCACCTACTGTGGGGCGCAGCAGGAAGAGGACCTGATCCCACCAGATGAAGACTCCGATTACGACGCCGATGAGTATGATGAAGGCGGCATTGTCCTGCCTCCCAGCATGTCCCTGTCTGTGCTCCAGACTGGCagctggtcacatgaccagcgCAGCTCCATGGCGACAAGCACCAGTGCTAGCTCGGGGGCGTACAGGTTCAGCTCTGAGGGAGCCCAATCATCATTTGATGACAGTGAGGATGACTTTGACAGGTTTGATACGGATGACGAGTCGTCTTATCGTAGAGATTCTGTCTACAGCTGTGTCACTCTGCCTTACTTTCACAGCTTCCTCTATATCAAAGGTGGGCTGCTGAACTCATGGAAGCGCCGCTGGTGTGTGCTGAAGGACGAGACGTTCCTGTGGTTTCGGAGCAGACAGGAGGCTCTGAAGCAGGGCTGGCTGCTTAAGAAGGGTGGAGGCTTATCAACTCTCTCTCGCCGCAACTGGAAACGCCGCTGGTTTGTCCTACGCCAGAGCAAACTTATCTATTACGACAACGATGCTGAGGAGAGGATGAAGGGCATGCTGGACATGCATGAAGCGAAAGAGGTCATTGATAACACAGGCAAGGAGAATGGAATAGATATTGTGATGCCAGAGAGAACATATCATCTTATAGCGGATAATGCAGAGGATGCCagCCActggttcagtgtgttgagtcaGGTACACACTTCCACCGAGCAGGAAATCAGAGAGATGCATGACGAACAGGCCAACCCACAGAACGCTGTGGGCACATTAGATGTAGGCATGATCGACTCTGTGTGTGCCTCAGACAACCCAgagagGCCAAACTCGTTTGTGATCATCACAGCTCACCGTGTCCTGCACTGTAATGCTGAGACCCCAGAGGAGATGCACCACTGGATCGCCCTCCTGCAGCGCTCTAAGGGAGACACTCGAGTCCAGGGCCAAGAATTCATTATTCGAGGCTGGTTACATAAAGAGATGAAGGGCAGTAGCCGTAATAACCTGAGACTAAAGAAACGCTGGTTCCTGCTTACCCATAATTCACTGGACTACTATAAGAGTTCAGAAAGAAACGCGCTCAAACTGGGCTCTCTGCTGCTAAACAGCCTGTGTTCTGTACTGCCACCTGACGAGAGAGTGTACAAAGAGACTGgttacTGGGGTATGACAGTGTTTGGCCGTAAACACTCGTATAGGCTCTACAGTAAGCTGCAAAGTGAAGTGTGCCGCTGGGCCAACGCTGTGCAGAATGTCATCGATAATAAACCACcaatggacacacacacgcagcaacTCATCCAGGACATTAAGGAGAATTGTCTAAACTCCGAAGTGGTGGATCAGATTTACAAGAGGAACCCAATACTGCGCTACACACACCATCCTCTACACACACCGTTACTTCCTCTGCCTTATGGAGACGTCCACCGCAGCTCtgaaagggggcggagctacagCACTTTGCAGGCTGAGGCGCTGAAGCTCTTTTGCACACTTCAGCAGCTTGAGGGCGTGGCCGATCCCGTCCCAGTTATCCAAGGCCTTCTGCAGACAGGTCATGACCTCCGACCCCTGCGAGATGAACTCTACTGTCAACTCATTAAGCAAACTACCCGGCCCCCTGAGCCAGGTGGCCCCGCCCACATCAGTGGCTGGAGAGTCATAGCCTGCATGTGCTGCACATTTAGCCCTATCTCCAGGAGCGTCCTGAAGTACCTCAAATTCCACATCAAAAGGACACGCGAGTTATTCCCAGGCACGGAGATGGAGCAATACGCTGCATTTTCCCAGGAGGCACTGAGGCATGTGCGTGGACGGGAATGTGTGCCATCACATGAGGAACTCAGAGCCATTCTCAgcagacaggaaatgacatcaacTGTATACTGCCATGGAGGTGGATCCTGCAAAATTGCCATCAACTCACACACCACAGCAGGAGAGgtGGTTGATAAGTTGCTAAAGGGTCTGGCTATGGAGGATAGCAGGAATATGTTTGCTCTGTTTGAACACAATGGCAGCACAGACAAAGCCATCGAGAGCCGCACCATAGTGGCCGACGTCCTTGCCAAGTTTGAGAAACTGGCAGGTGGAGAGGACAATCAGGGTGGAGGATGGAAGCTTTATTTCAAGCTGTACTGCTTTACAGACACGGAGAACATCGCTCTGGACAGCGTGGAGTTCGCGTTCATGTTTGAACAGgctCATGAGGCAGTGATTAATGGACAGTATCCTGCTCCTGAGGAAACTCTGCAGTTCCTGGCAGCTCTTCGGCTGCAGCATCTATTTGGAGACTACactacccagaatgcattgccGGACCTGGAGCAAGTGTTCCCTGTGGCACGCCTGCGTGCCCGTATTCAGCGCTTCACCTCCAGCAGCAGTGGCACAGAGAAGAAGCGGGGCAGTTTCCTGGAGGGCACGCTTAGGCGGAGCTTCCGGGGGTCTCTTGGGCGGAGACAGGGAGAGAATTCTGCTGCAATGGAGGCGTGGTTTCAGGATGAGAAGGCGGAATTAAGGAGCTGTTTGGTGGAGAAATGGAGGAAGCTGCAGGGAATGAGTCAGGATAATGCCATGATCAAATACATGAACCTGGTCAGAGAGTGGCAGGGTTACGGGTCTACACTGTTCAACGTAGAGtgtgtggaCGGTGTGTATCCTGCAGAGCTGTGGCTGGGAGTGAGTCGtaagggggtgtgtgtgtataagcagGGAGAGGCTTGGCCACTGGAGGTTTTCTCCTATGAGGCCATTCTCTCATTCGGTGCTCCACATTCCAACATTTACAAGATCAGTGTGGAGGGAAGAGACCTGTTCTTCCAAACTAGCCAGGTGATGGACATTGCTAAACTGATGAAAGCCTACATCAGCATGATTGTACAGAAGCGTTTCAGCACCTGTCCATCAATCAGTAGCCATGGCACACACTGCAGCAAATGGTGAAGTCTGACCTGCTGCGACCTTTCAGCTCTGAATTacgaacacacactctgttacaTGGAGAGATGTGAATAGTGGGACCTGGCTGAGGTTGTAGGTTATTCTTATTAAAACATTCCCAGGTTAAAGCCAAACCATTCAAGCCTTATTAAGCACTCAGTAGACACTCTGTAAAGCAGCAAGGTAATAATCACCGTGTTCTGAGGAGTGCTGTGTAAATCATGAAAAAGGACATTCACCCGAACGTGCCTAAAACCACTCTGCAGgataaatgtctttttataaAATCCTGACACACATTGCAGTATGAACCTCTTCAGCGTAATCAGTGCCATCTGAATTTCAGAAGCAGGTCTGTAGCCAATATTACCAAAAGTGTTCTGGAGACGCTGTGTGAGCGTTTAGGGTTTTATCCAATAGCGTTTCACTGGAGCTCTGCAGGCAGAACCTCCAGCCAAAGAGACTGTGCCTTTTTTGCaagtgcgtgcacacacacacacacacacacacagtccctgTATGTACAGTCACACTCAGCAAACACATACTTATCCTCAGTGCCGCTCTTAAATGTGTATGACTTTAATGTGCAATGTTTTGTCTTATACTGAAAaagttgtatatttttaaatctttttgttacaaaatgctCATGTCAGGAGgctgccactttttttttaaaagtaatttttattCAAAAGTACTTTTGCCATGTCATGTTATTTAGATTCCCAGAATCTTAAGAAACACCAGCAATATGCAACTTTTTTGACATTCCTGTGTAATATCGGTGGTAGATAATAAAAGGACCAATAAAA

Function

symbol description
myo10 Predicted to enable ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to act upstream of or within signal transduction. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of myosin complex. Is expressed in midbrain hindbrain boundary; otic vesicle; and rhombomere. Orthologous to human MYO10 (myosin X).

NR:

description
PREDICTED: unconventional myosin-X isoform X1

GO: NA

KEGG:

id description
K12559 MYO10; myosin X

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026941173.2 True 7354 mRNA 0.51 42 8193755 8257661

Neighbor

gene id symbol gene type direction distance location
adcy8 adcy8,LOC107569488,LOC107557810,LOC107659784,LOC107663336 coding upstream 63273 8070565 ~ 8130482 (+)
oc90 NA coding upstream 219759 7957043 ~ 7973996 (+)
LOC113543381 hhla1 coding upstream 240419 7941078 ~ 7953336 (+)
kcnq3 kcnq3,LOC107749193 coding upstream 258662 7883895 ~ 7935093 (+)
lrrc6 lrrc6,LOC108280282 coding upstream 312038 7859024 ~ 7881717 (+)
dip2cb LOC108280427,LOC108428306,LOC107721715,LOC107663347,LOC107659260,LOC107749093 coding downstream 17917 8275578 ~ 8327509 (+)
esyt2a esyt2,LOC106599471 coding downstream 77163 8334824 ~ 8379466 (+)
slco5a1b LOC108280428 coding downstream 128851 8386512 ~ 8422245 (+)
lactb2 lactb2 coding downstream 170158 8427819 ~ 8432247 (+)
slco5a1a LOC108280436,LOC108428320,LOC107721727,LOC107566986,LOC107690218,LOC107602641 coding downstream 179720 8437381 ~ 8462127 (+)
G316630 NA non-coding upstream 149058 8044493 ~ 8044697 (+)
G316419 NA non-coding upstream 464018 7703722 ~ 7729737 (+)
G316405 NA non-coding upstream 503790 7689377 ~ 7689965 (+)
G316398 NA non-coding upstream 521896 7671572 ~ 7671859 (+)
G316397 NA non-coding upstream 522235 7671290 ~ 7671520 (+)
G316741 NA non-coding downstream 1168 8258829 ~ 8259070 (+)
LOC113543009 NA non-coding downstream 1597 8259258 ~ 8261712 (+)
G316752 NA non-coding downstream 73845 8331506 ~ 8331786 (+)
G316754 NA non-coding downstream 74763 8332424 ~ 8333531 (+)
G316756 NA non-coding downstream 119124 8376785 ~ 8377093 (+)
fitm1 fitm1,LOC107688462,LOC107585187,LOC107722554,LOC107589905 other upstream 436794 7751694 ~ 7756961 (+)
G316413 NA other upstream 497836 7695534 ~ 7695919 (+)
crsp7 LOC108280732 other upstream 595591 7582313 ~ 7598164 (+)
G316001 NA other upstream 1058254 7133459 ~ 7135501 (+)
LOC113543138 LOC108280551,LOC108414043,LOC105006373 other upstream 1248765 6937340 ~ 6944990 (+)
G316744 NA other downstream 5678 8263339 ~ 8264061 (+)
G316745 NA other downstream 11048 8268709 ~ 8269198 (+)
LOC117599964 LOC107387363,LOC107676291,LOC107756568 other downstream 553934 8811595 ~ 8813410 (+)
G317390 NA other downstream 1154662 9412323 ~ 9415164 (+)
pip4p1a tmem55b,tmem55ba,LOC106600488 other downstream 1701332 9958993 ~ 9977916 (+)

Expression


Co-expression Network