p2ry12 (LOC108280198)


Basic Information

Item Value
gene id p2ry12
gene name LOC108280198
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 4251870 ~ 4256834 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026941338.2
AACCCCCTCCTCCCCCAAAATTAGCATATTGTGTTACTTTAAACTTGTTTCGGAGCAAATTTGTAGAAGAAGACCATTAGACTGAGAACTACATAAAGGCAAAGGTGTGCATAACAGAAACCCTGCAACTAATGGAGCTCCCAGAAGGAATGTCAACAACCCTTGTGAATTTCATGAACCTGACTAATTCCTCATGGCAAGACTGTTCCCGTAATAACGTACTGAAGACAGCGGTGTTCCCGATACTgtattctcttctcttcctgctAGGAATCATCCTCAACGGCCTAGCAGCATGGGTGTTTTTCAGCATCCCCAGTCGCTCGCACTTCATCATTTACCTAAAAAACATTGTGGTGGCTGATCTCCTCATGACTCTGACTTTTCCATTTAAGATCCTGTCGGACTCAAACATGGCCTCAGTTAGTGTCCGCATCTTTGTCTGCCGCATTTCTTCTGTGGTTTTCTACCTTACCATGTACATCAGCATCCTTTTCTTTGGCTTTATCAGCATTGACCGCTGTAGAAAGACTCTCTACCCTTTTGTTGGCACCAGTCCTAAAAAGCTGGCCCACAGGAAACTGCTTTCAGTTGGTATCTGGGTGTCCCTGCTGGCGCTTTCCCTCCCCAACATGATTCTCACCAGCAAGACGCCTAAATCAGACCACTTTAGCTGCAGTAGCCTGAAGACTGAGCTGGGCTTAAAGTGGCATGAAGTGGTCAACCACATCTGCCAGGTAATCTTCTGGGGTAATCTGATAGCAGTAGTGGTGTGTTATACACTCATCACCAAAGAGCTGTTCAACTCCTTTGCACGGACTCGCGTTCTGAATACAGCAGCTCAGAGCCAGCAGAGGAAGAAGAGGGTGAGAGCTAACGTGTTCCTCGTTCTCGCAGTGTTCTTCATATGCTTTGTGCCGTTTCACTTCGCCCGAGTGCCTTATACCCTGAGCCAGACGAGGGAACATAGTTTTGACTGTCAACAGAAACTTATCTTCTTCCAGGTGAAAGAGAGCACGCTGTGGCTGTCCTCTCTGAACTCTCTTCTAGACCCTCTCATCTATTTCTTCCTCTGCACGTCCTTCAGGGACTCACTGTTCAAAATCCTACGACTCTCGCCTGGGAGGTGTGGAGCATTGCAGTACACTACGGATACTCCTGCAGATAGCAGCCCTATGGGAAACCGCTCGACATAAATATAGTCCGGGGAGTTTCTGTGACTCTTAACATAACGATCCTGAATGTGATGTTTTAAACCTCTGTTGGAGTTTTATAGTGAAATTGAACTTTACAAACTGCATAttcagaatatactgtatatttttatgaaaagcataacatatgaaataaataaataaatgaaaaattggaGACCCCGAAGGACCTAGACCTACAACAATGTAAATATAGATGATTTCTGAGCTTAATCTGTATTTCAGGAGGAATAGTCAGACAGTTTAATCTTTATGATTGTTTcaaatatgtatatgtttacAAATGCAATTTCCTTCTGTTACATAAAAAGCCACCAagctgcatatatatataattctttcattttcaaaatatgaaataaacaaaattgtcCACAAATGTAAAAGTTTTAGAATTATGAATTTTGTTTTAACCAATTGTAATGTCTGACTGACTTATTTGACTTTTGCATGTACATCACTAAATACATcgtttaatataatt
>XM_026941339.2
GGACACCAACTCTTATGCTTTTTGTTGATGTACCATGTTAGCTGGTTCCATACTGGGCCTATTGGAATTTCAGTCTGGTATTAAACCCTGCAACTAATGGAGCTCCCAGAAGGAATGTCAACAACCCTTGTGAATTTCATGAACCTGACTAATTCCTCATGGCAAGACTGTTCCCGTAATAACGTACTGAAGACAGCGGTGTTCCCGATACTgtattctcttctcttcctgctAGGAATCATCCTCAACGGCCTAGCAGCATGGGTGTTTTTCAGCATCCCCAGTCGCTCGCACTTCATCATTTACCTAAAAAACATTGTGGTGGCTGATCTCCTCATGACTCTGACTTTTCCATTTAAGATCCTGTCGGACTCAAACATGGCCTCAGTTAGTGTCCGCATCTTTGTCTGCCGCATTTCTTCTGTGGTTTTCTACCTTACCATGTACATCAGCATCCTTTTCTTTGGCTTTATCAGCATTGACCGCTGTAGAAAGACTCTCTACCCTTTTGTTGGCACCAGTCCTAAAAAGCTGGCCCACAGGAAACTGCTTTCAGTTGGTATCTGGGTGTCCCTGCTGGCGCTTTCCCTCCCCAACATGATTCTCACCAGCAAGACGCCTAAATCAGACCACTTTAGCTGCAGTAGCCTGAAGACTGAGCTGGGCTTAAAGTGGCATGAAGTGGTCAACCACATCTGCCAGGTAATCTTCTGGGGTAATCTGATAGCAGTAGTGGTGTGTTATACACTCATCACCAAAGAGCTGTTCAACTCCTTTGCACGGACTCGCGTTCTGAATACAGCAGCTCAGAGCCAGCAGAGGAAGAAGAGGGTGAGAGCTAACGTGTTCCTCGTTCTCGCAGTGTTCTTCATATGCTTTGTGCCGTTTCACTTCGCCCGAGTGCCTTATACCCTGAGCCAGACGAGGGAACATAGTTTTGACTGTCAACAGAAACTTATCTTCTTCCAGGTGAAAGAGAGCACGCTGTGGCTGTCCTCTCTGAACTCTCTTCTAGACCCTCTCATCTATTTCTTCCTCTGCACGTCCTTCAGGGACTCACTGTTCAAAATCCTACGACTCTCGCCTGGGAGGTGTGGAGCATTGCAGTACACTACGGATACTCCTGCAGATAGCAGCCCTATGGGAAACCGCTCGACATAAATATAGTCCGGGGAGTTTCTGTGACTCTTAACATAACGATCCTGAATGTGATGTTTTAAACCTCTGTTGGAGTTTTATAGTGAAATTGAACTTTACAAACTGCATAttcagaatatactgtatatttttatgaaaagcataacatatgaaataaataaataaatgaaaaattggaGACCCCGAAGGACCTAGACCTACAACAATGTAAATATAGATGATTTCTGAGCTTAATCTGTATTTCAGGAGGAATAGTCAGACAGTTTAATCTTTATGATTGTTTcaaatatgtatatgtttacAAATGCAATTTCCTTCTGTTACATAAAAAGCCACCAagctgcatatatatataattctttcattttcaaaatatgaaataaacaaaattgtcCACAAATGTAAAAGTTTTAGAATTATGAATTTTGTTTTAACCAATTGTAATGTCTGACTGACTTATTTGACTTTTGCATGTACATCACTAAATACATcgtttaatataatt

Function

NR:

description
PREDICTED: P2Y purinoceptor 12-like

GO: NA

KEGG:

id description
K04298 P2RY12; P2Y purinoceptor 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026941338.2 True 1698 mRNA 0.42 2 4252748 4256834
XM_026941339.2 False 1663 mRNA 0.42 2 4251870 4256834

Neighbor

gene id symbol gene type direction distance location
igsf10 igsf10 coding upstream 13164 4225498 ~ 4238706 (+)
LOC113543359 LOC108280252 coding upstream 68441 4174793 ~ 4183429 (+)
tagln LOC108280395,LOC108424042,LOC103045968,LOC107567684 coding upstream 283519 3962755 ~ 3968351 (+)
trnap-ugg_21 NA coding upstream 304864 3946935 ~ 3947006 (+)
pmvk pmvk coding upstream 435016 3813253 ~ 3816854 (+)
LOC113543045 LOC108280189 coding downstream 1531 4258365 ~ 4263286 (+)
LOC113543038 LOC108280160,LOC108424050 coding downstream 10256 4267090 ~ 4276958 (+)
LOC113543011 LOC108280892 coding downstream 26333 4283167 ~ 4290110 (+)
wdr53 wdr53 coding downstream 43965 4300799 ~ 4308052 (+)
LOC113543315 LOC108280769,LOC108423999 coding downstream 58909 4315743 ~ 4350544 (+)
G314222 NA non-coding upstream 251556 3996502 ~ 4000314 (+)
LOC117599982 NA non-coding upstream 356185 3888027 ~ 3895685 (+)
G313990 NA non-coding upstream 405775 3845857 ~ 3846095 (+)
G313949 NA non-coding upstream 431961 3773070 ~ 3819909 (+)
G314362 LOC108280893 non-coding downstream 33420 4290254 ~ 4293729 (+)
G314364 NA non-coding downstream 38031 4294865 ~ 4295074 (+)
G314402 NA non-coding downstream 122803 4379637 ~ 4384865 (+)
G314404 NA non-coding downstream 260767 4517601 ~ 4527820 (+)
G314609 NA non-coding downstream 523104 4779938 ~ 4780145 (+)
LOC113543208 LOC108280571,LOC108435486 other upstream 762503 3423567 ~ 3489367 (+)
trnat-agu_12 NA other upstream 1362482 2889315 ~ 2889388 (+)
G313445 fbxl7,LOC108280577,LOC107689422,LOC105900492 other upstream 1576022 2675281 ~ 2675848 (+)
LOC117599997 LOC108280771,LOC108435500 other upstream 1589471 2655200 ~ 2662399 (+)
G313112 zswim5 other upstream 2066193 2181979 ~ 2185677 (+)
LOC113543063 stx1a,LOC105005600,LOC102795677 other downstream 335606 4592440 ~ 4762095 (+)
pou3f2b pou3f3,pou3f3a,LOC108280934,LOC105896554,LOC108266720 other downstream 531014 4787848 ~ 4789835 (+)
LOC113543089 mbp other downstream 644636 4901470 ~ 4958121 (+)
sptssb sptssb,LOC107567691,LOC107703014,LOC107750122 other downstream 831005 5087839 ~ 5091273 (+)
kpna4 kpna4,LOC107703033,LOC107750083,LOC107720438,LOC107662578 other downstream 944187 5201021 ~ 5216591 (+)

Expression


Co-expression Network