wacb (LOC108280665)


Basic Information

Item Value
gene id wacb
gene name LOC108280665
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 17965893 ~ 17979122 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026946276.2
TTATTTCGTTTTATCATTTTGATCAACTCCATACATTTGCAGGAGCCCAAATGAGTTCACACTGGgggtcagaaaaaaataattgcgGCTTCAATTTGAAAAAGTGTAACGAGCGAAGGGATTATCAGTCTTACCAGACCCTCAAGTACCAATCCAAAAGTCACTCTGCAAACGAGCACCGTCATGACAAGCTCCACAACACATCGGACCAAACTCCACCGAGCAAGATGCTGCGGCGCTCCGACAGTCCGGACGGCAAGCGAGGTGATGGAGACGGGagaacacctcacacacaccgacCCAAAGAGAGCAGCACCAGCTCTTCTCCACATGAGAACTCTGTCAATCACGGCCATCACAGCTCCAACTCTCACTCACTTCCACCCAAATGTGCAGAAATGCGTGATCCGGCCGACGACTGGTCCGAACACATCAGCTCGTCGGGAAAGAAATACTACTACAACTGCAGAACGGAGGTGTCACAGTGGGAGAAGCCCAAGGAATGGCTGGAGAGGGAGCAGCGACAGAAGGAAGCCTCTAAGGCCGTTGTGGTCAACAGTTTTCCCAAAGACAGAGATTACAGACAGGAGGCCATGCAGGCAGCCGCTGCGAGTGCTGTCACTGCTATGAAGCCCGCGCCGTCTGAGAAGGCGTCGTCTCATTGCGGTTTCTCGCAGGCGTCCTGCAGTGCCTCCAGCGGCCCGAACGTCTCGAGCGCTCCCAGTTCGTCGACGCCGTCCTCGTCGCACTCCTCGGCTCTCCTGCAGGACCCGGCTCTCCTCAGGCAGCTGCTCCCGGCGCTCCAGGCCACGCTGCACATCAACAACTCCAGCGTGGACATGGCCAAGATCAACGAGGTCCTCACAGCTGCTGTCACCCAAGCTTCCTTACAGTCTATGCTTCATAAACTTCTCACTGCTGGACCGTCTGCTTTCAACATCACTGCTCTGCTTTCCCAAGCCGCTCAGTTGTCCACACAAGCTCAGCAGCCGAGCCAGTCGCCCATATCCGTAACTCCAGATGCCTCATCGCCCAAGTCCTGCCTCGTGTCTCCCCGTGTGAGCACGCCTCAGACGAACAGCATGGCCTCGAAACCCCTCCCGAACGCCAGCTCTTTGCCGGCTCAAATAAAGgtTAGTGAGTCGGTGGTGAAATCGGCGCTCCAGCACTCCTCGGACAAAGCGCCGGACGTCGAGGACCCGCGGCTTCAAAGGCAAAACAGCCAAGGTCCTCCGAGTTCAGGGCCGAACGGGTGCCTGATGAATAACAGCGCGCCTGCATGTCCTCCAACCACCTTCAGCCCGTCACTAGCACTGCACTTCAACGAGAATCTCATTCGACATGTTCAGAGCTGGCCTTCAGATCACGTAGAGAAGCAGGCGGCGAGGTTACGCGAGGACGTCCACAACATGGGCAGCATGAACATGTCTGAGATCTGTGTGGAGCTGAAAAAGCTGCGCTCTCTGGTGCGAGTGTGTGAGATCCAGGCTACACTGAGAGAGCAAAGGATCCTCTTCTTGAGACAAGAGATCAAGGAGCTCGAGAAACTGAAGAACCAGAACTCCTTCATGGTTTGAGAAGCGGTGACGTCGGTTTAAGCAGAAGTAACTCAGCAGCTGGCTGCCATTTCTGAACCGTGGAACTACAGACTGGACTGGACTGGGCTGGGCTTTCTCTCCAAAGCTggagaaccaaaaaaaaaatagaaaaagaaaataaaaagctcaCCAAGGGTCACGCTGTCCGCTACATAAAGCCCCGAGGTTCATTCATAGATTCATCTTTGTACATACACTTCTCTATATTGAGTCAGTAAACACCAagagcaacacaaacacaataggGCAGCGTGTGGGGAAGGTTCCCgataaaaatggtttatttaggATGAGAAGGAAAGATCTGAGAAGGAACTCTTGAATAAACAGCGTATTAATTTGCGCCGTAACTTTTGTTTCACTCCCAGTCTCACAGGCTAGTCGTTTAGGATTTTTACAATCCGGTTTCACAAAGAGTGTGCGTCCATCGTGGACACAGACCGGATATATCTGTCCTAAATAAACAAAGCTGTTTATCCGGTCAGAGAGGATCCTGTCTGATTACTTGTCATGTTTAATGTGCTTCAATACGGccttgacattttctactaattttttgttttgttttgttttttaaacttgtgTAATAGGTCATCTAAGGTCAAAGCTTATTCAAAACTTTCCCTTTCCATATGCTTCTAGAGTGACGTCTCTACACCCTGAATTCTGACCCTGATTTCCACACAGTGATTGATTTCCACCCGTTCAGGCGTTCATTATGATTTACGACAGCATTTGCACTAACTGATTTGATATGAACCCACTTTGTGTATCGATCTTTAACCCAACTTATTCGCTGTAAGTACTTAACGAGGCTCAATCCATTAAACCTCATtttgcctctg
>XM_026946277.2
TCGTCCATCACCGTTGCGAGGCGCTACTGAGTAAACCGAAGAGATGATGATGGACCGTCGGCTTTCTCCCGAATAGCAAAGCGGCTTAAcaacttttcactttttcctttaacattttctattcacacacacacagctagtgAGACAGTTTGTGAGGCTTTAGATTGAGCTGAGCGTTAAAACTCGAACTGTAACGCACTCACATTAAACACGGCTTTAATGGTAATGCATGCACGGAAACAACCGAGACTCACTGATGGGTGTAACGAGCGAAGGGATTATCAGTCTTACCAGACCCTCAAGTACCAATCCAAAAGTCACTCTGCAAACGAGCACCGTCATGACAAGCTCCACAACACATCGGACCAAACTCCACCGAGCAAGATGCTGCGGCGCTCCGACAGTCCGGACGGCAAGCGAGGTGATGGAGACGGGagaacacctcacacacaccgacCCAAAGAGAGCAGCACCAGCTCTTCTCCACATGAGAACTCTGTCAATCACGGCCATCACAGCTCCAACTCTCACTCACTTCCACCCAAATGTGCAGAAATGCGTGATCCGGCCGACGACTGGTCCGAACACATCAGCTCGTCGGGAAAGAAATACTACTACAACTGCAGAACGGAGGTGTCACAGTGGGAGAAGCCCAAGGAATGGCTGGAGAGGGAGCAGCGACAGAAGGAAGCCTCTAAGGCCGTTGTGGTCAACAGTTTTCCCAAAGACAGAGATTACAGACAGGAGGCCATGCAGGCAGCCGCTGCGAGTGCTGTCACTGCTATGAAGCCCGCGCCGTCTGAGAAGGCGTCGTCTCATTGCGGTTTCTCGCAGGCGTCCTGCAGTGCCTCCAGCGGCCCGAACGTCTCGAGCGCTCCCAGTTCGTCGACGCCGTCCTCGTCGCACTCCTCGGCTCTCCTGCAGGACCCGGCTCTCCTCAGGCAGCTGCTCCCGGCGCTCCAGGCCACGCTGCACATCAACAACTCCAGCGTGGACATGGCCAAGATCAACGAGGTCCTCACAGCTGCTGTCACCCAAGCTTCCTTACAGTCTATGCTTCATAAACTTCTCACTGCTGGACCGTCTGCTTTCAACATCACTGCTCTGCTTTCCCAAGCCGCTCAGTTGTCCACACAAGCTCAGCAGCCGAGCCAGTCGCCCATATCCGTAACTCCAGATGCCTCATCGCCCAAGTCCTGCCTCGTGTCTCCCCGTGTGAGCACGCCTCAGACGAACAGCATGGCCTCGAAACCCCTCCCGAACGCCAGCTCTTTGCCGGCTCAAATAAAGgtTAGTGAGTCGGTGGTGAAATCGGCGCTCCAGCACTCCTCGGACAAAGCGCCGGACGTCGAGGACCCGCGGCTTCAAAGGCAAAACAGCCAAGGTCCTCCGAGTTCAGGGCCGAACGGGTGCCTGATGAATAACAGCGCGCCTGCATGTCCTCCAACCACCTTCAGCCCGTCACTAGCACTGCACTTCAACGAGAATCTCATTCGACATGTTCAGAGCTGGCCTTCAGATCACGTAGAGAAGCAGGCGGCGAGGTTACGCGAGGACGTCCACAACATGGGCAGCATGAACATGTCTGAGATCTGTGTGGAGCTGAAAAAGCTGCGCTCTCTGGTGCGAGTGTGTGAGATCCAGGCTACACTGAGAGAGCAAAGGATCCTCTTCTTGAGACAAGAGATCAAGGAGCTCGAGAAACTGAAGAACCAGAACTCCTTCATGGTTTGAGAAGCGGTGACGTCGGTTTAAGCAGAAGTAACTCAGCAGCTGGCTGCCATTTCTGAACCGTGGAACTACAGACTGGACTGGACTGGGCTGGGCTTTCTCTCCAAAGCTggagaaccaaaaaaaaaatagaaaaagaaaataaaaagctcaCCAAGGGTCACGCTGTCCGCTACATAAAGCCCCGAGGTTCATTCATAGATTCATCTTTGTACATACACTTCTCTATATTGAGTCAGTAAACACCAagagcaacacaaacacaataggGCAGCGTGTGGGGAAGGTTCCCgataaaaatggtttatttaggATGAGAAGGAAAGATCTGAGAAGGAACTCTTGAATAAACAGCGTATTAATTTGCGCCGTAACTTTTGTTTCACTCCCAGTCTCACAGGCTAGTCGTTTAGGATTTTTACAATCCGGTTTCACAAAGAGTGTGCGTCCATCGTGGACACAGACCGGATATATCTGTCCTAAATAAACAAAGCTGTTTATCCGGTCAGAGAGGATCCTGTCTGATTACTTGTCATGTTTAATGTGCTTCAATACGGccttgacattttctactaattttttgttttgttttgttttttaaacttgtgTAATAGGTCATCTAAGGTCAAAGCTTATTCAAAACTTTCCCTTTCCATATGCTTCTAGAGTGACGTCTCTACACCCTGAATTCTGACCCTGATTTCCACACAGTGATTGATTTCCACCCGTTCAGGCGTTCATTATGATTTACGACAGCATTTGCACTAACTGATTTGATATGAACCCACTTTGTGTATCGATCTTTAACCCAACTTATTCGCTGTAAGTACTTAACGAGGCTCAATCCATTAAACCTCATtttgcctctg
>XM_026946278.2
TTTTTTATTTCGTTTTATCATTTTGATCAACTCCATACATTTGCAGGAGCCCAAATGAGTTCACACTGGgggtcagaaaaaaataattgcgGCTTCAATTTGAAAAAGTGTAACGAGCGAAGGGATTATCAGTCTTACCAGACCCTCAAGTACCAATCCAAAAGTCACTCTGCAAACGAGCACCGTCATGACAAGCTCCACAACACATCGGACCAAACTCCACCGAGCAAGATGCTGCGGCGCTCCGACAGTCCGGACGGCAAGCGAGGTGATGGAGACGGGagaacacctcacacacaccgacCCAAAGAGAGCAGCACCAGCTCTTCTCCACATGAGAACTCTGTCAATCACGGCCATCACAGCTCCAACTCTCACTCACTTCCACCCAAATGTGCAGAAATGCGTGATCCGGCCGACGACTGGTCCGAACACATCAGCTCGTCGGGAAAGAAATACTACTACAACTGCAGAACGGAGGTGTCACAGTGGGAGAAGCCCAAGGAATGGCTGGAGAGGGAGCAGCGACAGAAGGAAGCCTCTAAGGCCGTTGTGGTCAACAGTTTTCCCAAAGACAGAGATTACAGACAGGAGGCCATGCAGGCAGCCGCTGCGAGTGCTGTCACTGCTATGAAGCCCGCGCCGTCTGAGAAGGCGTCGTCTCATTGCGGTTTCTCGCAGGCGTCCTGCAGTGCCTCCAGCGGCCCGAACGTCTCGAGCGCTCCCAGTTCGTCGACGCCGTCCTCGTCGCACTCCTCGGCTCTCCTGCAGGACCCGGCTCTCCTCAGGCAGCTGCTCCCGGCGCTCCAGGCCACGCTGCACATCAACAACTCCAGCGTGGACATGGCCAAGATCAACGAGGCTCAGCAGCCGAGCCAGTCGCCCATATCCGTAACTCCAGATGCCTCATCGCCCAAGTCCTGCCTCGTGTCTCCCCGTGTGAGCACGCCTCAGACGAACAGCATGGCCTCGAAACCCCTCCCGAACGCCAGCTCTTTGCCGGCTCAAATAAAGgtTAGTGAGTCGGTGGTGAAATCGGCGCTCCAGCACTCCTCGGACAAAGCGCCGGACGTCGAGGACCCGCGGCTTCAAAGGCAAAACAGCCAAGGTCCTCCGAGTTCAGGGCCGAACGGGTGCCTGATGAATAACAGCGCGCCTGCATGTCCTCCAACCACCTTCAGCCCGTCACTAGCACTGCACTTCAACGAGAATCTCATTCGACATGTTCAGAGCTGGCCTTCAGATCACGTAGAGAAGCAGGCGGCGAGGTTACGCGAGGACGTCCACAACATGGGCAGCATGAACATGTCTGAGATCTGTGTGGAGCTGAAAAAGCTGCGCTCTCTGGTGCGAGTGTGTGAGATCCAGGCTACACTGAGAGAGCAAAGGATCCTCTTCTTGAGACAAGAGATCAAGGAGCTCGAGAAACTGAAGAACCAGAACTCCTTCATGGTTTGAGAAGCGGTGACGTCGGTTTAAGCAGAAGTAACTCAGCAGCTGGCTGCCATTTCTGAACCGTGGAACTACAGACTGGACTGGACTGGGCTGGGCTTTCTCTCCAAAGCTggagaaccaaaaaaaaaatagaaaaagaaaataaaaagctcaCCAAGGGTCACGCTGTCCGCTACATAAAGCCCCGAGGTTCATTCATAGATTCATCTTTGTACATACACTTCTCTATATTGAGTCAGTAAACACCAagagcaacacaaacacaataggGCAGCGTGTGGGGAAGGTTCCCgataaaaatggtttatttaggATGAGAAGGAAAGATCTGAGAAGGAACTCTTGAATAAACAGCGTATTAATTTGCGCCGTAACTTTTGTTTCACTCCCAGTCTCACAGGCTAGTCGTTTAGGATTTTTACAATCCGGTTTCACAAAGAGTGTGCGTCCATCGTGGACACAGACCGGATATATCTGTCCTAAATAAACAAAGCTGTTTATCCGGTCAGAGAGGATCCTGTCTGATTACTTGTCATGTTTAATGTGCTTCAATACGGccttgacattttctactaattttttgttttgttttgttttttaaacttgtgTAATAGGTCATCTAAGGTCAAAGCTTATTCAAAACTTTCCCTTTCCATATGCTTCTAGAGTGACGTCTCTACACCCTGAATTCTGACCCTGATTTCCACACAGTGATTGATTTCCACCCGTTCAGGCGTTCATTATGATTTACGACAGCATTTGCACTAACTGATTTGATATGAACCCACTTTGTGTATCGATCTTTAACCCAACTTATTCGCTGTAAGTACTTAACGAGGCTCAATCCATTAAACCTCATtttgcctctg

Function

NR:

description
PREDICTED: WW domain-containing adapter protein with coiled-coil-like isoform X1

GO: NA

KEGG:

id description
K23884 WAC; WW domain-containing adapter protein with coiled-coil

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026946276.2 False 2443 mRNA 0.50 13 17966192 17979122
XM_026946277.2 True 2600 mRNA 0.50 13 17965893 17979122
XM_026946278.2 False 2324 mRNA 0.50 12 17966188 17979122

Neighbor

gene id symbol gene type direction distance location
rab18b rab18,rab18b,LOC108430170,LOC107566717,LOC107708473,LOC107681801,LOC107691240,LOC107550439 coding upstream 93864 17860311 ~ 17872029 (+)
yme1l1b yme1l1,yme1l1b,LOC108430171,LOC107708459,LOC107566723,LOC107747521 coding upstream 112023 17842449 ~ 17853870 (+)
c1ql3b c1ql3b,LOC108280659,LOC107747511,LOC107566459,LOC107599856,LOC107691085,LOC107691073,LOC107681760,LOC107708591 coding upstream 448526 17514697 ~ 17517367 (+)
gpt2l LOC108280657,LOC108430180,LOC107599855,LOC107708598 coding upstream 458506 17487387 ~ 17507387 (+)
hecw1b hecw1b,LOC108280656,LOC108433086,LOC107600217,LOC107662981 coding upstream 488072 17433918 ~ 17477821 (+)
bambib LOC108280666,LOC108430169 coding downstream 11603 17990725 ~ 17994678 (+)
gnb4a gnb4,LOC108280743,LOC108440866,LOC103030165,LOC107705311,LOC107653516,LOC107564248,LOC105899196,LOC107724752 coding downstream 456227 18435349 ~ 18449078 (+)
si:ch1073-184j22.1 LOC108280744,LOC108440865,LOC107653514,LOC107564249,LOC107660327,LOC107705312 coding downstream 475014 18454136 ~ 18477637 (+)
sft2d3 sft2d3 coding downstream 509505 18488627 ~ 18489656 (+)
dusp28 dusp28 coding downstream 538806 18517928 ~ 18520990 (+)
G322233 LOC108280496 non-coding upstream 110635 17854548 ~ 17855258 (+)
G322146 NA non-coding upstream 179192 17721938 ~ 17786701 (+)
G322127 NA non-coding upstream 334381 17631214 ~ 17631512 (+)
LOC117599934 NA non-coding upstream 428733 17525571 ~ 17537160 (+)
G321704 LOC108410862 non-coding upstream 1005159 16958745 ~ 16960734 (+)
G322324 NA non-coding downstream 95207 18074329 ~ 18074748 (+)
G322365 NA non-coding downstream 219718 18198840 ~ 18199709 (+)
G322398 NA non-coding downstream 250273 18229395 ~ 18231463 (+)
G322405 NA non-coding downstream 359207 18338329 ~ 18343490 (+)
G322429 NA non-coding downstream 391605 18370727 ~ 18373883 (+)
npc1 npc1 other upstream 299680 17589072 ~ 17666213 (+)
egfra egfr,LOC107747514,LOC107691124 other upstream 329284 17570649 ~ 17636609 (+)
fuz fuz other upstream 482216 17478834 ~ 17483677 (+)
LOC117599970 LOC108280611,LOC108261562,LOC108261692,LOC108261605 other upstream 1106211 16838768 ~ 16859682 (+)
LOC117595733 LOC108280611,LOC108261562,LOC108280614,LOC108280616,LOC108261605,LOC108261692 other upstream 1172195 16791402 ~ 16793698 (+)
si:ch211-162e15.3 LOC108280563 other downstream 246799 18225921 ~ 18227233 (+)
pex5lb pex5lb,LOC108280742,LOC108440867,LOC107653517,LOC107564246,LOC107660316 other downstream 414901 18394023 ~ 18430022 (+)
slc44a5a slc44a5,slc44a5a,LOC108280730 other downstream 836887 18816009 ~ 18871360 (+)
ssbp3a ssbp3,ssbp3a other downstream 965576 18944698 ~ 18985082 (+)
gng12a gbg12,gng12a,gng12,LOC107705318,LOC107700509,LOC105895117 other downstream 1225536 19204658 ~ 19220229 (+)

Expression


Co-expression Network