bpnt2 (impad1)


Basic Information

Item Value
gene id bpnt2
gene name impad1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 18756729 ~ 18763488 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026946325.2
ATGACCTCACTTCCGGGTTTGACCCGGAAGTGAGTGCTGTGTAGCGATCCGACCGTAGACGTGGAAGAAGATTTGTAGCTGTCGCTGCAGCACAGGTGTCGATTTATGTAGTAATTTgaaatttgttaaatatattgttgtaatatgtaataacagAGTAAGTTATTGGACGTTTGAAGAGGACCTGAGAAGATTTTCCGAGCTAGTTTAGCCGTTAGCAGTGTGAATTGTGTGCCCGGTTATACACTGCAGATGGGATGGAAGTGAAGGGGAAGAGCTAACGCAGAGACTCGCGCGACGATATTAGCTCTTCTTCAGGCGTCTCGGCGGTTAGATCCAGCTCCCAGCCGCTGCCATGGCGCCCATGGGGATCCGGCTGTCCCCGCTTGGAGTGGCGGTGTTCTGCCTGCTCGGGCTCGGCCTCCTGTACCACCTCTACTCCGGGGTCCTGTCCAGCAGACTGGCCGCTTTCAGGCAGAGGAAGACGGTGGATCTGAGGGATCTCCTCGCCTTGTCCATGGAGGCTGCGGTGCAGGGAGGATGGGAGGTGAAGCGCATCCGCATGGAGGACACACTGGAGGAAAAGTCCAAGGGCAAAACCAAAGAAGGAGCCTTGGAGAAGCTCACCATGGGGGATTTAAACTCCCACAGGAAAATGTACTATCTGATCAGAAACACATACCCTTACATACAGGTGAACTCTGAGGAACACGATAACTCAGACGGCGAGGCCACTGTATGGACACGTAACATCCCAGATGAGGTCCTGAGCAAGATCCCAGAGGGGAAGCTGGTGCCTGCTGAGAGCGTGACGGTGTGGATCGACCCGCTCGACGCCACGCAGGAGtacacagAAAACCTGCGGAAGTATGTCACGACCAtggtgtgtgtggctgtgaaCGGGGAACCTGTTGTAGGTGTGATCCACAAACCTTTCACTGGcttcacagCATGGGCGATGGTGGACGGAGGAGCGAACGTGGCACCGCGACACTCCTACAACGCCAACGCCCCCAAGGTCATAGTGTCACGCTCACACGCAGGCAAAGTGAAAGGCTTCATTCAGCAGGCGTTTGGGAACAACACCGAGATCATACCAGCAGGGGGCGCAGGATATAAAGTTCTCGCTCTGCTGGATGCCTCTGATGAAGAATACGAGAAGGTAGACATGTACATCCACGTGACCTACATCAAGAAGTGGGACATCTGCGCCGGAAACGCCATTTTGAAAGCGCTAGGTGGTCACATGACCACGCTGAAGGGAGAGGAGATCGATTATTCGGGCTCGGAGAAGAACCCGGGCGGCGTGCTCGCCACCGTCAGCATCGACCACGACGCTGTGGTGAAAAAGCTGCCGGCCTGGGACGAGAACAAAAACTGATACCCGGGTCGGGTACTACAGACTGAACGCTCGGGGACTGGAGACGGAACACAGAACCAGTGATCAACACGCAGACACGGGAGCTTCAGCTCGACTGCGAGTGTCGACGGGTGCGTGCTTAGCTTTTAACGGCGGTTAGCTTCTTCTGGAGTAACATTCGATGCCACACAGTTAAGGGACGGGCTCTCAGTATGGCCGCGTTCATTATTTATCTCCACATTGGACACAAACTTTAGTTTCATGATCCTCGGATACATTCTGTCTATAAGTGCAGTGCTAgtagggatgcatcgataccgTTTTTAAAGACGCGTATGAGTACGTGTTTTTTGTTAATCGTCGATACCAATACCAAAGTGAGTAACCTATTTAGCGTTAATCAATCAGGAGCAtagtaaaacattttctttagcTCTGGTGATGTTTGTTGCTGCcatgtgctgctagcaatgaactcaTAGTTTAGAGACGttacagcatttaaacagtatctttatcAGAAAGAGTGACGACGGCCCACCTGAGTGTGCACAGCAGTATCGGACAGTGggattattaaaattaagtgCCAGGAATTGTACCTTGAGTTATGAGCAAAGTGTAGCACGTGTCttagtgctcagtgctcgcttAACTGAACTGCTCTCACATCCAGTGGTTTCTTTGCACACTCGCTTTACTTCCTACCTTTGCGTGTGCGCAGTTCACGGCACCCAGCGCCCGTTTTTAATAACCAGCTTCACCGATACTGCTCTGAGCGCTCATTAAAGACGCTGTTTAAACACtgtaagatgttttatcaggttactcaTATTGTAAGAAGACGCCGTAGTTCCTTTTCctcagagcacagtttgcagtctgatTTGCTTTGATCAGGAACATTCTTTTTCATCACGTACTTTCACGTGATATCGGATGTTGGTATTTTGTCAAGTacgagtaaatgagcatggtatTGGACTGATATGCGAAACCAGTTTCGGTATCAATGTATCCCTGCGTTCTAAAGAACAGGGCGTTAGAcgtgtaaaaatattaaatttaaaaaatataacattatggCACTATGAAATCCTCAGACAGCAGCACTCCTTCAAATATGTCCAAAATTAAGGAAGCCTTTATCTCAGGAGCACAAATTCCACCTGCTTAGGCAGCCTCCTCTCAAACAGGGAAGCAAGGGCACGAAATCATCATCTGAACATTTCACTTCACACCTTCTGTTAATAATTTGAGCATCGCACCCATGTGCATGTCATCACTCCTCCTTAGTTTAGTCAGCAAAATTAGTCAGTTAAAAGGTTAGTTCAGCGAAAAAATCAAAAGTACACAATTTTGTGGATCAGCCGACATGTTTAGCGTCTGAAGTTTACTTCTTTGGTTTTGCACAGGAGCTGGAAGTTTAATGTCTGTGTCACGAAACGTTCCATAAATACATGCACAGATCTTCATATACATGCTCCAGAATGACATCGTCAAGCTCCGTGATCTCATTTCATACAGCAAAAATAGGCTGTTTACAAAGTTATGTTTACAGTGGAATTATATTAACATCACTTCCTGCTTTGGTTAAGATTCCAGttttccaagatggctgcctccATAATGTTCCAGCGTTCAGCTACAAGGTGAAGtttagttcatgtttatagataacaGAAAGTCACACGGAAGAACTGGGTGTGCTTTGAGatggtgtaaatatttatacaaaagAATTTGAGTGAGAGAGGCTTCacagtgctattgaattctcgattctgattggccagcagctctgacagctctgacagtagtgcgcTTGTACTGAtaacattatcgtttctatagtaacagctcattcacagggactcgtacagcagacGCGCCAtgtaaacggattaaaaactgAGTGTAACCAAATgatggtttatttaacatttatggaaggagtctccagtttcagcgcttTGTAGTGGTTAGTATGCTTTCTGTCAggggtaacagtgactccgcttcatcacaccaccccgacgctgattattttcttataacagcacaacccctaagtgtgttattccttacttcactCCAGTGCAAAACATCAGACACCGAACATGACTCGGCTGATCGATTACTTCCAGTAATTTCCTactaaataagaaagaaaatggcgtatttttctttcactgagctcttcCTTTAACCCCTTTGATATTAGGATTACTCTAATAGGATCATTGCTGAGCTTTTCTTTTCGTTTTGAGAGCTTTGAGAAAAGGGTGTAATATTTTTAggtgtgtgtcatttttttaatagtaaacTAAACAGCAGACGGACGAGCAGGTTTTAATGTAGcacatgtaacacacactcactgtgatGACTAGCGGTCAGGTGAGTGCCCCGCCCATCGTCCGTTGCTCCTCGCTCTCCCTGAAGTGGCATGCAAGAAAACGGAGTGTAAATACGGCACATGGTATTAAAGAGTTGTTTGCTGTTAAAATCCTGCATGCGCTCTGTTATATATGACCGAGGCATGTTGTGTGATGTCATCGTGCtacctttaatttaattttcttttttggatTGTAATAAATAGCaacttttatttgttgttgtgtttttcctcGAAAGGAATTTTCCAAGGTGGTGGATTGCCTTGTCGGAAGAAGTGAACTATGTCTCACAAGTATTTTTGGAGAAAGTGATGGaagtaatgaaataaagtgCAGTACACTGTAA

Function

symbol description
impad1 Golgi-resident PAP phosphatase

NR:

description
inositol monophosphatase 3

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0006021 inositol biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0052832 inositol monophosphate 3-phosphatase activity molecular_function
GO:0052833 inositol monophosphate 4-phosphatase activity molecular_function
GO:0008934 inositol monophosphate 1-phosphatase activity molecular_function

KEGG:

id description
K15759 IMPAD1, IMPA3; Golgi-resident PAP phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026946325.2 True 4108 mRNA 0.46 5 18756729 18763488

Neighbor

gene id symbol gene type direction distance location
mffb LOC108280720 coding upstream 2669 18747527 ~ 18754060 (+)
LOC113546386 LOC108280704 coding upstream 40177 18692192 ~ 18716552 (+)
cwc25 cwc25,LOC102792885,LOC101487873 coding upstream 89157 18663158 ~ 18667572 (+)
fgf12a fgf12a,fgf12,LOC108280711,LOC108436038,LOC106568709,LOC105006885,LOC106598267,LOC103365152,LOC107549734 coding upstream 119025 18585063 ~ 18637704 (+)
mb21d2 mb21d2,LOC107705301,LOC107572431,LOC107673980 coding upstream 174509 18574380 ~ 18582220 (+)
penka LOC108280728 coding downstream 27857 18791345 ~ 18797861 (+)
sdr16c5a LOC108280727 coding downstream 35715 18799203 ~ 18810210 (+)
cryz cryz coding downstream 155579 18919067 ~ 18925573 (+)
fam151a fam151a coding downstream 167571 18931059 ~ 18936790 (+)
cdcp2 cdcp2 coding downstream 232069 18995557 ~ 19002207 (+)
G322696 NA non-coding upstream 36290 18715395 ~ 18720439 (+)
G322462 NA non-coding upstream 316863 18439167 ~ 18439866 (+)
G322446 NA non-coding upstream 324027 18432326 ~ 18432702 (+)
G322429 NA non-coding upstream 382846 18370727 ~ 18373883 (+)
G322405 NA non-coding upstream 413239 18338329 ~ 18343490 (+)
G322738 NA non-coding downstream 1704 18765192 ~ 18765602 (+)
G322744 NA non-coding downstream 47617 18811105 ~ 18812335 (+)
G322746 NA non-coding downstream 49015 18812503 ~ 18812848 (+)
G322747 NA non-coding downstream 51126 18814614 ~ 18814817 (+)
G322802 NA non-coding downstream 195595 18959083 ~ 18959319 (+)
pex5lb pex5lb,LOC108280742,LOC108440867,LOC107653517,LOC107564246,LOC107660316 other upstream 326707 18394023 ~ 18430022 (+)
si:ch211-162e15.3 LOC108280563 other upstream 529496 18225921 ~ 18227233 (+)
npc1 npc1 other upstream 1090516 17589072 ~ 17666213 (+)
egfra egfr,LOC107747514,LOC107691124 other upstream 1120120 17570649 ~ 17636609 (+)
fuz fuz other upstream 1273052 17478834 ~ 17483677 (+)
slc44a5a slc44a5,slc44a5a,LOC108280730 other downstream 52521 18816009 ~ 18871360 (+)
ssbp3a ssbp3,ssbp3a other downstream 181210 18944698 ~ 18985082 (+)
gng12a gbg12,gng12a,gng12,LOC107705318,LOC107700509,LOC105895117 other downstream 441170 19204658 ~ 19220229 (+)
LOC113546339 NA other downstream 550372 19313860 ~ 19316206 (+)
clcn2a clcn2a,clcn2,LOC108280323,LOC107710554,LOC107732945 other downstream 1365765 20129253 ~ 20281067 (+)

Expression


Co-expression Network