dip2cb (LOC108280427,LOC108428306,LOC107721715,LOC107663347,LOC107659260,LOC107749093)


Basic Information

Item Value
gene id dip2cb
gene name LOC108280427,LOC108428306,LOC107721715,LOC107663347,LOC107659260,LOC107749093
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 8275578 ~ 8327509 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034314850.1
TCCACCGGGAGTGCGTGCGCCGTGGTCACGTGACGCGGACGCCATGGCACAGGCGCTGAGGCGGTGAGGCGTCGCTGGAGCTCAGTGGCTTCTCTGTTCTCCGCCGCAAATCACTGGCGCTCGCAGCATCCTGATTTCCCGCAGCCGCGGCTTCTCTGCGCCCCGCAGGCCAATGCACCAGTCAGTCAGCCTTTAGAGCGTCAGCTGTGTGGAGTCGGATGCTCGCTCAGACCCTCCTGCTGCCCGTTAGGGCTCTGAGAAAGAGCCGTGTGTGAGACTGAGACACGGGGAGGAGACCGAATGGCGGAGCGTGATGCAGTACCGCTGCCGCTGGACATCCGAGCGCGGATCgcggagctggagctggagctgtcGGAAGGGGACATCACTCAGAAAGGTTATGAGAAGAAAAGAGCCAAACTCATTCGAGCCTACCTGCCCCATGCACCAGTAGGAGCAGAGTCTCGAGTTCCCGTGACTCCTTCTTCGTCATCTTCATTCTCATCTCGTTACCAGCGACGACGCTCCACTGGCTCACGGGATGAGCGGTATTGCTCGGATGTTCACTCTGAAGCAGTGCAGGCAGCACTGGAGCGTCAGTGTGAAAGAAAGATGGCCGTCCCCATGCCCTCTAAACGACACTCCCTCGTTGTCCAAACATCAATGGAGGCATACACACCCCCAGACTCATCCTCATGCTCTGAGGGTGAAGGCTCCCTAGGAAGAGCCAGAGGTGCAGGAGTGGAGGCCTGGATCAGCCGAGCACTTCGTGGCTCATCTTCATCAACcacatcttcatcatcatcgcACAGCAATGGATCTGCCAATGCAGCACGTTTGGCAGAGAGTAATGCACACACTTACAGCTTCGGCCAAGTTTCTCATCTGTCCCTCAAAAGGCGGGGCTTAAGGGAGATGGGTGTCTCATTAGAGAATGGTAACGTTGGACAACGCTCTTATGACTACCAGTCCGAACGTCCTTGGTCATCGCTGGACTCAGAGGACAGTCATCCTGCACCTCCTGACATCACAAGCTGCATGTCAGACCCACCCCTCGTTACCATGGAGCGCCCACAGGTCGCCTTGCCAACCAAGCCTATGCCCAAATATGGTAACGCTGAGCTCATGGAGACAGGAGATGGTGTGCCTGTGAGTAGTCGTGTGTCCTCTAAGATTCAGCAGCTGGTAAACACTCTGAAGAAGCCCAAGAGACGTCCACTGAGGGAGTACTTCATTGACGACTTTGAGGAACTGTTGGAAGTCCGGCAGCCTGATCCTTCCTTACCACATCCAGAAGGAGCAGAATCGAAAATAGCCCAAGGGGAGGAACTGGGAAGACTTAAGAATTGCCCTGCTTCTCTAGAGGCAGCCTTACAGCGCTGGGGTGCCATTGCACCCAAAGCACCAtgtctgaccatcacacacgcTGGTGCTAAACAaccttacacactcacatatgGTAAGCTGTGGTCCAGGAGTATGAAAGTGGCCTATTACATCCTCCACAAACTTGGAACCAAGCAAGAACCCATCGTCCGGCCGGGAGACAGAgtggcATTAGTGTACCCCAATAATGACCCCGTGGCTTTTTTGGTGGCGTTTTATGGCTGTCTGTTAGCTGAAGTCGTCCCAGTACCCATTGAAGTGCCACTTAGCAAAAAGGATGCTGGGAGTCAGCAGATTGGTTTTCTCCTGGGCAGCTGCGGGGTTGCCGTAGCACTGACCAGTGATGCGTGCCACAAAGGCCTTCCCAAGAGCCTCAGTGGTGACATTGTGCAATTCAAAGGCTGGCCAAAGTTGTTGTGGGTTGTGACGGAGTCAAAGCATTTATCGAAACCTCCTAGAGAGTGGTATCCTCTAATTAAAGATGCTAACAACGACACTGCGTATATCGagtaTAAGACTTGCAAAGATGGAAGTGTTCTGGGAGTGACAGTGACGAGAATGTCCATGCTGACACACTGccaaacactcacacatactTGTGGTTACAGTGAAGctgagACTCTTGTGAATGTGTTGGATTTCAAGAAGGACGTAGGACTGTGGCATGGCGTTTTAACGAGTGTTCTCAACATGCTCCACACTGTGAGTGTTCCATATGCTCTCATGAAGGTGAATCCATTGTCCTGGGTCCAGAAGGTCTGTCAGTATAAAGctaaagtggtgtgtgtgaagagtaGGGATCTTCACTGGGCTCTGATAGCACACAGAGATCAGAGTGACATCAACCTGAGCTCTCTCCGTATGCTACTGGTTGCTGACGGAGCTAAtccatGGTCGATCTCGTCATGTGATGCATTCCTGAACGTGTTTCAGAgtttggggttgaggtcagaggtcatctgTCCATGTGCCAGCTCACCAGAGGCTCTTACTGTAGCTGTAAGGAGGCCGTGTGACGGCAGCTCTAAGCCTATAGGCAGAGGAGTCCTCAGTATGATGGGACTGAGTCACGGCGTCATCCGGGTGGACACCGGAGAAAAGCTGTCTGTCCTCACACTGCAGGATGTTGGCTCTCCCATGCCAGGAGccCTGATATGTGTGGTGAAGTTGGAAGGTGTTCCTCAGTTGTGTAAAACAGATGAGATTGGAGAGATCTGTGTGTCATCCATTGCCACAGGAACATCCTATTATGGGCTTACAGGCATGAGCAAAAACACTTTTGAGGTGTGCCCTGTGTCCAGCAgtggtgtgttagtgagtgagtgtgtgtatgtacgcTCAGGGCTTTTGGGATTTGTAGGCCCAGGTGGAGCCATCTTTGTTGCTGGAAAGTTGGACGGATTAATGCAAGTTGGGGGCCGGAGACATAACAGTGATGACATCGTTGCTACTGCACTTGCTGTTGAACCCATGAAGTTTGTGTACAGAggaagGATAGCCGTGTTCTCCATTACTGTGCTTCATGATGAGAGGATCGTGGTGGTGGCAGAGCAGAGACCAGATTCTACTGAAGAGGAGAGCTTTCAGTGGATGAGCAGAGTACTACAGgctATAGATAGTATCCATCAGGTTGGTGTGTATTGTCTGGCGCTGGTTCCGTCTAATACCCTGCCCAAAACTCCTCTTGGAGGAATCCACCTTTCTGAGACAAAGCAGCTGTTCCAGGACGGAGCGCTGCACCCCTGCAACGTCCTCATGTGCCCTCATTCCTGCGTCACCAATCTGCCCAAACCCCGACAGAAACAACCTGAGGTTGGCCCTGCCTCTGTTATGGTGGGGAACCTGGTGGCAGGAAAGCGGATGGCGCAGGCCAGCGGGCGAGACCTCAGTCAGGAAGACAATGATCAGTTCCTTTTCCTGCCTGAGGTGTTGCAGTGGAGAGCTCAAACTACACCTGACCACATACTTTACACGCTCATTAACTCAaggggGGCAGTGGGGAGTTCTCTAACATGTCTACAGCTCCATAAAAGAGCAGAGAAGATTGCTGCACTGCTGTTTGAGAAAGGGCAACTGCGAGAGGGAGATCATGTAGCATTAGTGTACCCACCAGGTTTAGATCTGATTGCTGCCTTCTACGGTTGTTTGTATGCTGGCTGTATCCCTATCACAGTCAGGCCACCTCATCCCCAAAACATCTCTACAACTCTGCCAACTGTCAAAATGATTGTAGAggtgagtcGTTCGGGGTGTGTTATGACCACACAGGTGATCAGTAAACTTCTGAAGTCTAAAGAGGCATCAGCAGTGGTGGACCTCCGATCATGGCCACCTGTCCTCGACACAGaCGACCTGCCAAAGAGACGGTCTCCTCTGCTCTATAAGCCATGTGATCCAGAGTCTTTGGCCTACTTAGACTTCAGTGTGTCCACCACTGGCATGCTTGCTGGAGTAaagATGTCTCACAGTGCTACCAGTGCTTTATGTCGCTCTATAAAGTTGCAGTGTGAGCTATATCCATCCCGGGAAGTAGCTGTGTGTTTGGATCCCTACTGTGGACTGGGCTTTGTCATCTGGTGCCTCTGCAGtgtgtatgcagGGCACCAATCCATACTGATCCCTCCAGCAGAGTTAGAGGTAAACCCAGCCCTATGGTTGCTTTCCGTCAGCCAGTTTAAAGTGAGAGACACTTTCTGTTCTTACTCAGTCATGGAGCTCTGTACCAAGACCCTCGGCACGCTCACTAACTCGCTCAAGGCACGAGGACTGGATCTATCCCGTGTACGCACATGTGTGGTGGTGGCAGAGGAGAGGCCTCGCATCGCTCTGACTCAGTCCTTCTCTAAGCTTTTTAAAGATGTTGGGCTTCACCCTCGTGCTGTCAGTACTTCCTTTGGCTGCAGGGTGAATCTGGCTGTGTGTCTGCAGggaaccTCTGGACCAGACCCCACTACGGTCTATGTGGACATGAGAGCACTCAGACATGACAGagtaCGCTTGGTGGAAAAAGGGTCTCCACATAGTTTGCCTCTCATGGAGTCAGGCAAGATCTTACCAGGTGTCCGCATCATCATCGCCAATCCAGAGACAAAGGGGCCAATCGGAGATTCTCATTTAGGAGAGATATGGGTTCACAGCAGTCAGAATGCTAGTGGATATTTCTCAGTATTCGGGGAGGAGAATGTTCGCTTAGATCATTTTAGTGCCAGACTCAGTTTTGGAGACACACAAACTGTCTGGGCTAGAACCGGCTACCTCGGCTTCCTCCGCAGGACAGAACTCACTGACGCCAGTGGAGAGAGGCACGATGCTCTGTATGTAGTGGGAGCGTTGGATGAGGCGATGGAGCTGAGAGGGATGCAGTACCACCCCATTGACATTGAGACTTCCATCATCCGAACCCACAAGAGCATTACAGAATGtgctgtGTTCACCTGGACTAAGCTCTTGGTTGTGGTGGTCGAGCTGGATGGTTCAGAGCAGGAGGCCCTGGACCTGGTTCCCATGGTAACCAACGTAGTTCTGGAGGAGCATTACCTCATCGTGGGTGTGGTGGTTGTCGTGGATACCGGCGTTATTCCCATCAACTCGCGTGGAGAGAAGCAGCGCATGCACCTGAGAGACGGCTTCCTCGCCGACCAGCTTGACCCCATATATGTTGCCTACAACATGTAGAAAAGAGAAGCTCAAACATACTCAAACACTTCcacttaaaaatgtaaaaagacacGCACTCACAGCTGGGTGCATAGACATGGCCTAGAAAATGCAAAAGAATGCACGTTTAACCTTAATATGGAAACCCACTGACAGAAACATGCACTTTCTCCAACACATTTCACATATTTGCATTCAACCCCATATAAATGGCTTCAAATATGTAGAAACACAAGCCTATTCAATTACTTTTGGAAGCTGAAAGCACTAGCTAATAGAATGCAGATCATTTTAAACAGTGGGATCTCTAAAGTAAAGAACTGTaacatctatacacacacacacacacacacacacataatgagTAGGTCACCTGTCATCAGTCTGTAGTCAAGCAGGTTGCACTTTTTGCCTCTCCATAAACACAGGagaatatgcattttttttttttttaactgcatgCAAGATTAATACAGAGGTTTCACACTGAAGGACACAATGGAAAGTATGCGTTGCCAGTGAAGCCAATCCAAAAGTGTATCTTTCCAAATGATGGTTATCAGCCAAATCATGTTTTCTAATTAGCCAACAAGACCAATTCTCTTCTTTTTGCTAGAGGTTACAGAGCCCATGATCAGGAAGTGTGCTGATGCAATAGACAGGTTTACATTGCTACATGCATAATCAAATGGCATACATAATCAAGCACTCACCCATATATGGGCCATGGTGCCTGTGTATATAAGGGACTTGGAGACGTATCTTAAATTTTctttggtgtttgtgttttgttcatgtGCAATTCATTGTTTTGCTAGTGTTGCTTCATTTTGTTTATCCTGCAATATTTTCAAGTCAGGGAATTTTATAAGATATTTACTGTCAAGTCTGACATACCGCTCATATTATCTGaaggctttctttctttttttaatatttggtgtTGCAAAAGTAGCCGTTTTATACAAAGACATatcaaatgaaacattttaaattacctattttctttaatatgtttaaaatgtgatttgtgCACAGGTTGTTCTGTTCGTCATCCCTTTATTTTATGCAATAGCAtaagttatttttcatttgatcttttttattttttgtctaatgtattttcatttttgccaTCTTGTGTGAATAATATCTAACACGCagatacatacatgtatatattctGTATAGCTTGTGTTTATGAAGATGACATAAAGCACTGCTTCCTCTCTGTTATTGTATGTAGCTAGGGTGGAAAAAGGAAGGACTCCACAAAAAATATTGACCGAGGGAAGGAATAACATTCAGAGAGGTGgagatcactgtgtgtgtaaatcctggttagtttttatttttccttgtgTCTTACATTTCCTGCAGGACTATGAGCTGTGGGTTCTGTCATTATGGTAAAAGCAAAAAAGAtgtcttttaaaatgtcaataaaatattttctattattcaGTAAAA

Function

NR:

description
PREDICTED: disco-interacting protein 2 homolog C-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0008134 transcription factor binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K24909 DIP2C; disco-interacting protein 2 homolog C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034314850.1 True 6513 mRNA 0.48 38 8275578 8327509

Neighbor

gene id symbol gene type direction distance location
myo10 myo10,LOC107602648,LOC107749189 coding upstream 17917 8193755 ~ 8257661 (+)
adcy8 adcy8,LOC107569488,LOC107557810,LOC107659784,LOC107663336 coding upstream 145096 8070565 ~ 8130482 (+)
oc90 NA coding upstream 301582 7957043 ~ 7973996 (+)
LOC113543381 hhla1 coding upstream 322242 7941078 ~ 7953336 (+)
kcnq3 kcnq3,LOC107749193 coding upstream 340485 7883895 ~ 7935093 (+)
esyt2a esyt2,LOC106599471 coding downstream 7315 8334824 ~ 8379466 (+)
slco5a1b LOC108280428 coding downstream 59003 8386512 ~ 8422245 (+)
lactb2 lactb2 coding downstream 100310 8427819 ~ 8432247 (+)
slco5a1a LOC108280436,LOC108428320,LOC107721727,LOC107566986,LOC107690218,LOC107602641 coding downstream 109872 8437381 ~ 8462127 (+)
adhfe1 adhfe1 coding downstream 139873 8467382 ~ 8476972 (+)
LOC113543009 NA non-coding upstream 13866 8259258 ~ 8261712 (+)
G316741 NA non-coding upstream 16508 8258829 ~ 8259070 (+)
G316630 NA non-coding upstream 230881 8044493 ~ 8044697 (+)
G316419 NA non-coding upstream 545841 7703722 ~ 7729737 (+)
G316405 NA non-coding upstream 585613 7689377 ~ 7689965 (+)
G316752 NA non-coding downstream 3997 8331506 ~ 8331786 (+)
G316754 NA non-coding downstream 4915 8332424 ~ 8333531 (+)
G316756 NA non-coding downstream 49276 8376785 ~ 8377093 (+)
G317008 NA non-coding downstream 260486 8587995 ~ 8588211 (+)
G317027 NA non-coding downstream 333777 8661286 ~ 8661776 (+)
G316745 NA other upstream 6380 8268709 ~ 8269198 (+)
G316744 NA other upstream 11517 8263339 ~ 8264061 (+)
fitm1 fitm1,LOC107688462,LOC107585187,LOC107722554,LOC107589905 other upstream 518617 7751694 ~ 7756961 (+)
G316413 NA other upstream 579659 7695534 ~ 7695919 (+)
crsp7 LOC108280732 other upstream 677414 7582313 ~ 7598164 (+)
LOC117599964 LOC107387363,LOC107676291,LOC107756568 other downstream 484086 8811595 ~ 8813410 (+)
G317390 NA other downstream 1084814 9412323 ~ 9415164 (+)
pip4p1a tmem55b,tmem55ba,LOC106600488 other downstream 1631484 9958993 ~ 9977916 (+)
capn10 capn10 other downstream 2208922 10536431 ~ 10562994 (+)
eif4e2 eif4e2,LOC107600102,LOC107579667,LOC107749152,LOC107730458 other downstream 2236312 10563821 ~ 10568907 (+)

Expression


Co-expression Network