LOC113533663


Basic Information

Item Value
gene id LOC113533663
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 16619633 ~ 16619734 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003403441.1
GTGAACGGCAGCACATATACTAAAATTAGAATGATATAGAGAAGACTAGCATGGCCCCTGCGCAAGGATGACACACAAAATCGTGAACATTACCAAGATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003403441.1 True 102 ncRNA 0.42 1 16619633 16619734

Neighbor

gene id symbol gene type direction distance location
LOC113533630 pnp5a,LOC108280898,LOC108427136,LOC107692836,LOC107747996,LOC107569603,LOC107728028,LOC108440276,LOC107703870 coding downstream 8655 16605398 ~ 16610978 (-)
LOC113533174 LOC108280837 coding downstream 18039 16594144 ~ 16601594 (-)
LOC113533290 midn,LOC108271022 coding downstream 93050 16509561 ~ 16526583 (-)
cirbpa cirbpa,LOC108280649,LOC107655466,LOC107574409,LOC107729620,LOC107665639,LOC107712399 coding downstream 145945 16470099 ~ 16473688 (-)
cib3 cib3,LOC107687907 coding downstream 227353 16385427 ~ 16392280 (-)
foxl2b foxl2,LOC108280919,LOC101448029 coding upstream 16386 16636120 ~ 16638282 (-)
LOC113533139 nop9 coding upstream 45895 16665629 ~ 16678051 (-)
abhd4 abhd4,LOC108280801,LOC107655861 coding upstream 87482 16707216 ~ 16714338 (-)
lrrc24 lrrc24 coding upstream 267372 16887106 ~ 16912991 (-)
eef1da eef1da,LOC108280684,LOC107663523,LOC108410862,LOC107757829,LOC107655868,LOC107600209 coding upstream 337786 16957520 ~ 16971858 (-)
G321536 NA non-coding downstream 10076 16608816 ~ 16609557 (-)
LOC113533305 NA non-coding downstream 72132 16546239 ~ 16547501 (-)
G321505 NA non-coding downstream 99263 16518388 ~ 16520370 (-)
G321468 NA non-coding downstream 163510 16394208 ~ 16456123 (-)
G321652 NA non-coding upstream 123172 16742906 ~ 16744015 (-)
G321998 NA non-coding upstream 740054 17359788 ~ 17389919 (-)
G322072 fuz non-coding upstream 860708 17480442 ~ 17481385 (-)
G322251 yme1l1b,yme1l1,LOC108430171,LOC107681681 non-coding upstream 1229418 17849152 ~ 17850372 (-)
G322250 NA non-coding upstream 1232899 17852633 ~ 17853837 (-)
stk11 stk11 other downstream 31817 16564708 ~ 16587816 (-)
G321462 NA other downstream 252629 16357574 ~ 16367004 (-)
LOC113533563 NA other downstream 895277 15687082 ~ 15724356 (-)
LOC113533479 LOC108280451 other downstream 1388053 15222778 ~ 15231580 (-)
theg NA other downstream 1874146 14731734 ~ 14745487 (-)
trnal-uaa_3 NA other upstream 353793 16973527 ~ 16973770 (-)
G322080 NA other upstream 880331 17500065 ~ 17500832 (-)
LOC113546399 LOC108280496,LOC108430154 other upstream 1234113 17853847 ~ 17872108 (-)
G322538 NA other upstream 1774515 18394249 ~ 18394823 (-)
G322826 NA other upstream 2134038 18753772 ~ 18755593 (-)

Expression


Co-expression Network