G324019


Basic Information

Item Value
gene id G324019
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 18544 ~ 18748 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU383849
GctaaagcagagaaatgtgaGTTTCACCAGACTTCCACCACGTTCCTGGGATATGTGGTCAGTCCTGAGGGAGTGGCGATGGATGATCGCAAAGTGCAGGCCGTCCTGAACTGGCCCCAACCTACGACTGTCAAGGAGATGCAGAGATTCCTTGGATTCGCCAACTTCTACAGACGATTTATCAGAGACTTCAGCTCCATCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU383849 True 205 lncRNA 0.52 1 18544 18748

Neighbor

gene id symbol gene type direction distance location
cdk14 cdk14 coding upstream 19237 37985 ~ 57762 (-)
LOC113525569 pttg coding upstream 39674 58422 ~ 61552 (-)
kdf1a LOC108256236 coding upstream 118941 137689 ~ 147138 (-)
eomesb LOC108256235 coding upstream 129857 148605 ~ 158579 (-)
azi2 azi2,LOC107570847,LOC108261202 coding upstream 175900 194648 ~ 203737 (-)
G324017 NA non-coding downstream 2764 15478 ~ 15780 (-)
G324449 NA non-coding upstream 36747 55495 ~ 55786 (-)
G324450 NA non-coding upstream 37625 56373 ~ 56830 (-)
G324465 NA non-coding upstream 72154 90902 ~ 91291 (-)
G324481 NA non-coding upstream 200030 218778 ~ 219050 (-)
G324482 NA non-coding upstream 205370 224118 ~ 224913 (-)
LOC113523705 LOC108261200 other upstream 180711 199459 ~ 211469 (-)
herpud2 LOC108256328,LOC108431059,LOC107666842 other upstream 215758 234506 ~ 331761 (-)
slc4a7 slc4a7,LOC108256322,LOC107686077,LOC107666816 other upstream 331990 350738 ~ 396573 (-)
smarcc1a smarcc1,LOC107600486,LOC107666814,LOC107686050 other upstream 355451 374199 ~ 454823 (-)
dyrk1b dyrk1b,LOC108256247,LOC107685988,LOC107719113,LOC107592201 other upstream 530312 549060 ~ 575271 (-)

Expression


Co-expression Network