G324143



Basic Information


Item Value
gene id G324143
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 557415 ~ 558139 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU384046
ctgtccatctgtctgtctgtctctctgtccatctgtctgtctgtctctctgtccatctgtctgtctgtctctctgtccatctgtctgtctgtctctctgtccatctgtctgtctgtctctctgtccatctgtctgtctgactctctgtccatctgtctctctgtccatctgtctctctgtccatctgtctgtctgcgtctCTGTTTGTATGCATCTGTCtctttatttgtctgtctgtctaacagTCGAGCCCTTGAACATAAATACGCACTACCATGACTCATGTCTCAGTTGGTTTTGTCTGCGTTTGGGACGGAGCCCATGTGTCTTTACCCCTGTGATCTATCCCAGCATGCACCTGGGGAGCCTCACCTGTCCGAAGGAGCCCTTGCCGATGAGCGAGTCGATTTCGTAGCGGTCGAGCCACTTCTCCCCGTTCTTCACGATGTAGTCGTAGTTGTCGTCGTCGTAGCCGTCGTTGTAAACTTTCCGCTCTTTCTTGGTGCTCGAGTCCTCGGGCGGAACCTGCTGCGCACGTCGCTTCTTCTTAGTGTAGTACACCTGCAGGGGGCGGGGAATCGCAGAGGGGGCGGGGAATCGCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU384046 True 603 TUCP 0.53 2 557415 558139

Neighbor


gene id symbol gene type direction distance location
zgc:162160 LOC108256255,LOC108437392,LOC107719116,LOC107666762,LOC107737835,LOC107592933 coding upstream 33258 505314 ~ 524157 (+)
ppox ppox coding upstream 74117 469956 ~ 483298 (+)
LOC113524801 NA coding upstream 90792 460213 ~ 466623 (+)
LOC117595771 NA coding upstream 100436 455516 ~ 456979 (+)
dpy19l1l dpy19l1 coding upstream 206866 333684 ~ 350549 (+)
etsrp LOC108256243 coding downstream 92779 650918 ~ 657392 (+)
pycard NA coding downstream 100342 658481 ~ 663976 (+)
LOC113524791 LOC108256242 coding downstream 116729 674868 ~ 680370 (+)
gramd1a gramd1a,LOC108256231 coding downstream 161250 719389 ~ 745520 (+)
si:dkey-199f5.8 LOC108256292,LOC106605235,LOC108437381,LOC106582539,LOC102233588 coding downstream 248502 806641 ~ 816145 (+)
G324140 LOC106578455,LOC103388722 non-coding upstream 297 552723 ~ 557118 (+)
G324142 dyrk1b,LOC102785375 non-coding upstream 896 555797 ~ 556519 (+)
G324139 NA non-coding upstream 9132 543868 ~ 548283 (+)
G324116 smarcc1 non-coding upstream 111290 444777 ~ 446125 (+)
G324083 NA non-coding upstream 119605 365488 ~ 437810 (+)
G324151 NA non-coding downstream 14867 573006 ~ 575138 (+)
G324125 NA non-coding downstream 27040 585179 ~ 588909 (+)
G324156 alkbh8 non-coding downstream 40271 598410 ~ 599170 (+)
G324160 NA non-coding downstream 48906 607045 ~ 607543 (+)
G324197 NA non-coding downstream 155256 713395 ~ 713801 (+)
G324120 NA other upstream 90790 454910 ~ 466625 (+)
G324085 NA other upstream 115128 438391 ~ 442287 (+)
G324067 NA other upstream 145306 354781 ~ 412109 (+)
tbx20 tbx20,LOC107600539,LOC107719124,LOC107592953,LOC107666841 other upstream 229476 240370 ~ 327939 (+)
G324068 NA other upstream 264827 241197 ~ 292588 (+)
G324123 NA other downstream 9063 567202 ~ 635045 (+)
G324161 fbl,LOC107719117,LOC107666874,LOC107737817,LOC107686016,LOC107600489 other downstream 49473 607612 ~ 610009 (+)
G324206 NA other downstream 187534 745673 ~ 748475 (+)
psmc4 psmc4,LOC107719110 other downstream 216150 774289 ~ 806528 (+)
cpne4a cpne4a,LOC108256561,LOC108412597,LOC107600547,LOC107713817,LOC107668284,LOC107666882 other downstream 398445 956584 ~ 1010223 (+)

Expression



Co-expression Network