Gene
RNA
| Item | Value |
|---|---|
| gene id | G324498 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 297235 ~ 321868 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU384490 | True | 929 | lncRNA | 0.37 | 2 | 297235 | 321868 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| azi2 | azi2,LOC107570847,LOC108261202 | coding | downstream | 93498 | 194648 ~ 203737 (-) |
| eomesb | LOC108256235 | coding | downstream | 138656 | 148605 ~ 158579 (-) |
| kdf1a | LOC108256236 | coding | downstream | 150097 | 137689 ~ 147138 (-) |
| LOC113525569 | pttg | coding | downstream | 235683 | 58422 ~ 61552 (-) |
| cdk14 | cdk14 | coding | downstream | 239473 | 37985 ~ 57762 (-) |
| pkdc | LOC108256330 | coding | upstream | 75164 | 397032 ~ 400945 (-) |
| cspg5a | LOC108256325 | coding | upstream | 82236 | 404104 ~ 428410 (-) |
| zp3d.2 | NA | coding | upstream | 208447 | 530315 ~ 535250 (-) |
| LOC113524795 | NA | coding | upstream | 216327 | 538195 ~ 544033 (-) |
| alkbh8 | alkbh8 | coding | upstream | 276528 | 598396 ~ 605015 (-) |
| G324488 | NA | non-coding | downstream | 47520 | 247960 ~ 249715 (-) |
| G324482 | NA | non-coding | downstream | 72322 | 224118 ~ 224913 (-) |
| G324481 | NA | non-coding | downstream | 78185 | 218778 ~ 219050 (-) |
| G324465 | NA | non-coding | downstream | 205944 | 90902 ~ 91291 (-) |
| G324450 | NA | non-coding | downstream | 240405 | 56373 ~ 56830 (-) |
| G324516 | NA | non-coding | upstream | 32121 | 353989 ~ 354632 (-) |
| G324544 | NA | non-coding | upstream | 247721 | 569589 ~ 570151 (-) |
| G324545 | NA | non-coding | upstream | 261024 | 582892 ~ 583557 (-) |
| G324549 | NA | non-coding | upstream | 313836 | 635704 ~ 636105 (-) |
| LOC117595770 | NA | non-coding | upstream | 335454 | 657322 ~ 658118 (-) |
| LOC113523705 | LOC108261200 | other | downstream | 85766 | 199459 ~ 211469 (-) |
| slc4a7 | slc4a7,LOC108256322,LOC107686077,LOC107666816 | other | upstream | 28870 | 350738 ~ 396573 (-) |
| smarcc1a | smarcc1,LOC107600486,LOC107666814,LOC107686050 | other | upstream | 52331 | 374199 ~ 454823 (-) |
| dyrk1b | dyrk1b,LOC108256247,LOC107685988,LOC107719113,LOC107592201 | other | upstream | 227192 | 549060 ~ 575271 (-) |
| G324579 | NA | other | upstream | 404759 | 726627 ~ 727634 (-) |
| nek11 | LOC108256279 | other | upstream | 721445 | 1043313 ~ 1102117 (-) |
