G324549


Basic Information

Item Value
gene id G324549
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 635704 ~ 636105 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU384579
gttttgtgtagcaggttgtgtgtttgatgtagcaggttgtgtgtttgatgtagcaggttgtgtgtttgatgtagcaggttgtgtgttttctgtagcagattgtgtatatggtgtagcaggttgtgtgctttgtgtagcaggttgtgtgtttgatgtagcaggttgtgtgtttggtgtagcaggttgtgtgttttgtgttttgtgtagcaggttgtgtgtttggtgtagcaggttgtgtgtttggtgtagcaggttgtgtatatggtgtagcaggttgtgtgtttggtgtagcaggttgtgtatatggtgtagcaggttgtgtgtttgatgtagcaggttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384579 True 340 lncRNA 0.44 2 635704 636105

Neighbor

gene id symbol gene type direction distance location
fbl fbl,LOC107737817,LOC107686016,LOC107666874,LOC107719117 coding downstream 23584 606087 ~ 612120 (-)
alkbh8 alkbh8 coding downstream 30689 598396 ~ 605015 (-)
LOC113524795 NA coding downstream 91671 538195 ~ 544033 (-)
zp3d.2 NA coding downstream 100454 530315 ~ 535250 (-)
cspg5a LOC108256325 coding downstream 207294 404104 ~ 428410 (-)
si:ch211-225p5.8 LOC108256244 coding upstream 27957 664062 ~ 670835 (-)
scn1ba LOC108256230,LOC108437383 coding upstream 116537 752642 ~ 770973 (-)
mtdhb LOC108256290 coding upstream 184517 820622 ~ 831921 (-)
ubxn11 ubxn11 coding upstream 211730 847835 ~ 856733 (-)
LOC113525074 NA coding upstream 261221 897326 ~ 902262 (-)
G324545 NA non-coding downstream 52147 582892 ~ 583557 (-)
G324544 NA non-coding downstream 65553 569589 ~ 570151 (-)
G324516 NA non-coding downstream 281072 353989 ~ 354632 (-)
G324498 NA non-coding downstream 313836 297235 ~ 321868 (-)
G324504 NA non-coding downstream 316701 315399 ~ 319003 (-)
LOC117595770 NA non-coding upstream 21217 657322 ~ 658118 (-)
G324562 NA non-coding upstream 44743 680848 ~ 681481 (-)
G324563 NA non-coding upstream 59117 695222 ~ 701258 (-)
LOC113524793 NA non-coding upstream 59214 695319 ~ 698441 (-)
LOC117595774 NA non-coding upstream 62450 698555 ~ 701245 (-)
dyrk1b dyrk1b,LOC108256247,LOC107685988,LOC107719113,LOC107592201 other downstream 60433 549060 ~ 575271 (-)
smarcc1a smarcc1,LOC107600486,LOC107666814,LOC107686050 other downstream 180881 374199 ~ 454823 (-)
slc4a7 slc4a7,LOC108256322,LOC107686077,LOC107666816 other downstream 239131 350738 ~ 396573 (-)
herpud2 LOC108256328,LOC108431059,LOC107666842 other downstream 303943 234506 ~ 331761 (-)
LOC113523705 LOC108261200 other downstream 424235 199459 ~ 211469 (-)
G324579 NA other upstream 90522 726627 ~ 727634 (-)
nek11 LOC108256279 other upstream 407208 1043313 ~ 1102117 (-)
scap scap,LOC107600505,LOC107717374,LOC107668298,LOC107713836 other upstream 658760 1294865 ~ 1342071 (-)
G324748 NA other upstream 734371 1370476 ~ 1371029 (-)
kif13a kif13a other upstream 767159 1403264 ~ 1451000 (-)

Expression


Co-expression Network