G324579


Basic Information

Item Value
gene id G324579
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 726627 ~ 727634 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU384611
ctctcacacacacacacacactctctctctctcacacacacacacacacacactctctctctcacacacacacacactctctctctctcacacacacacacacacacacactctcacacacacacacacacacacacacacacacacacacacgcaccttaaaTCGGCTTTAACGCCTTAATGCCCTGCTTTGTCTCATCCTCCTGAGTGTGGAGACAGAAGAtggaacgcacacacacactcacacacacacacacacacacacacacacacacacacttattcataaCGCTACTTGATCCTATTAAGAACTGAAGCATTCAGAGAGGCTTCACAGAGGCTTCACAGAGGCGTTATAGATGCTGAACAGTGAATGCAGAGGATCTGATACTCACTCGAACATCTCATTCAGTTCCCTCCGCGGTGCGCGTCATAACGCGTGTATAACGGCTCAATGCGGCGCGCTGCTGCGCTCATAATACcggcgacacacacacacacacacacactcacacacacacacacacacacacacacacccggcgcTAATGTCACTCCAATAAACTACAATGAAGTAAAACCGGGGATCCGTTCcgggagagaaaaacagatgatCCGCGCGTTTATGTCCTCTATTtccactgagagagacagagagagagagagagagagagagagagagagagacagaaagagagagagaaagagagagagagagagaatagagggaggagaaaaggagagcagcagcagcagcaggaggaggaagaggaggaagaggaggctcTCCAACGCCCTTTTACAGGAAGATTAACTTGCCCTGATGAACAgaagagatggatagagagaggatgaatgaaaaaaaagatgaatgaagaaaaaaaaaggatgtataGAAGTTAAAACCGGACGCGCACGCGGGCTACAGTGGGGTTTACAATACGTTTACGATTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384611 True 956 TUCP 0.48 2 726627 727634

Neighbor

gene id symbol gene type direction distance location
si:ch211-225p5.8 LOC108256244 coding downstream 55792 664062 ~ 670835 (-)
fli1rs LOC108256249,LOC108437389 coding downstream 85120 613922 ~ 641507 (-)
fbl fbl,LOC107737817,LOC107686016,LOC107666874,LOC107719117 coding downstream 114507 606087 ~ 612120 (-)
alkbh8 alkbh8 coding downstream 121612 598396 ~ 605015 (-)
LOC113524795 NA coding downstream 182594 538195 ~ 544033 (-)
scn1ba LOC108256230,LOC108437383 coding upstream 25008 752642 ~ 770973 (-)
mtdhb LOC108256290 coding upstream 92988 820622 ~ 831921 (-)
ubxn11 ubxn11 coding upstream 120201 847835 ~ 856733 (-)
LOC113525074 NA coding upstream 169692 897326 ~ 902262 (-)
si:dkey-11p23.7 siglec15 coding upstream 188285 915919 ~ 919909 (-)
G324571 NA non-coding downstream 12842 713329 ~ 713785 (-)
LOC113524788 NA non-coding downstream 14264 709872 ~ 712363 (-)
G324563 NA non-coding downstream 25369 695222 ~ 701258 (-)
LOC117595774 NA non-coding downstream 25382 698555 ~ 701245 (-)
LOC113524793 NA non-coding downstream 28186 695319 ~ 698441 (-)
G324581 NA non-coding upstream 177 727811 ~ 748501 (-)
G324589 NA non-coding upstream 15913 743547 ~ 783093 (-)
G324580 NA non-coding upstream 19385 747019 ~ 747564 (-)
G324584 NA non-coding upstream 53451 781085 ~ 782326 (-)
G324602 NA non-coding upstream 64312 791946 ~ 792487 (-)
dyrk1b dyrk1b,LOC108256247,LOC107685988,LOC107719113,LOC107592201 other downstream 151356 549060 ~ 575271 (-)
smarcc1a smarcc1,LOC107600486,LOC107666814,LOC107686050 other downstream 271804 374199 ~ 454823 (-)
slc4a7 slc4a7,LOC108256322,LOC107686077,LOC107666816 other downstream 330054 350738 ~ 396573 (-)
herpud2 LOC108256328,LOC108431059,LOC107666842 other downstream 394866 234506 ~ 331761 (-)
LOC113523705 LOC108261200 other downstream 515158 199459 ~ 211469 (-)
nek11 LOC108256279 other upstream 315679 1043313 ~ 1102117 (-)
scap scap,LOC107600505,LOC107717374,LOC107668298,LOC107713836 other upstream 567231 1294865 ~ 1342071 (-)
G324748 NA other upstream 642842 1370476 ~ 1371029 (-)
kif13a kif13a other upstream 675630 1403264 ~ 1451000 (-)
LOC113533106 LOC108256308,LOC108256309,LOC108261853 other upstream 829382 1557016 ~ 1568506 (-)

Expression


Co-expression Network