Gene
RNA
| Item | Value |
|---|---|
| gene id | G324579 |
| gene name | NA |
| gene type | unknown |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 726627 ~ 727634 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU384611 | True | 956 | TUCP | 0.48 | 2 | 726627 | 727634 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-225p5.8 | LOC108256244 | coding | downstream | 55792 | 664062 ~ 670835 (-) |
| fli1rs | LOC108256249,LOC108437389 | coding | downstream | 85120 | 613922 ~ 641507 (-) |
| fbl | fbl,LOC107737817,LOC107686016,LOC107666874,LOC107719117 | coding | downstream | 114507 | 606087 ~ 612120 (-) |
| alkbh8 | alkbh8 | coding | downstream | 121612 | 598396 ~ 605015 (-) |
| LOC113524795 | NA | coding | downstream | 182594 | 538195 ~ 544033 (-) |
| scn1ba | LOC108256230,LOC108437383 | coding | upstream | 25008 | 752642 ~ 770973 (-) |
| mtdhb | LOC108256290 | coding | upstream | 92988 | 820622 ~ 831921 (-) |
| ubxn11 | ubxn11 | coding | upstream | 120201 | 847835 ~ 856733 (-) |
| LOC113525074 | NA | coding | upstream | 169692 | 897326 ~ 902262 (-) |
| si:dkey-11p23.7 | siglec15 | coding | upstream | 188285 | 915919 ~ 919909 (-) |
| G324571 | NA | non-coding | downstream | 12842 | 713329 ~ 713785 (-) |
| LOC113524788 | NA | non-coding | downstream | 14264 | 709872 ~ 712363 (-) |
| G324563 | NA | non-coding | downstream | 25369 | 695222 ~ 701258 (-) |
| LOC117595774 | NA | non-coding | downstream | 25382 | 698555 ~ 701245 (-) |
| LOC113524793 | NA | non-coding | downstream | 28186 | 695319 ~ 698441 (-) |
| G324581 | NA | non-coding | upstream | 177 | 727811 ~ 748501 (-) |
| G324589 | NA | non-coding | upstream | 15913 | 743547 ~ 783093 (-) |
| G324580 | NA | non-coding | upstream | 19385 | 747019 ~ 747564 (-) |
| G324584 | NA | non-coding | upstream | 53451 | 781085 ~ 782326 (-) |
| G324602 | NA | non-coding | upstream | 64312 | 791946 ~ 792487 (-) |
| dyrk1b | dyrk1b,LOC108256247,LOC107685988,LOC107719113,LOC107592201 | other | downstream | 151356 | 549060 ~ 575271 (-) |
| smarcc1a | smarcc1,LOC107600486,LOC107666814,LOC107686050 | other | downstream | 271804 | 374199 ~ 454823 (-) |
| slc4a7 | slc4a7,LOC108256322,LOC107686077,LOC107666816 | other | downstream | 330054 | 350738 ~ 396573 (-) |
| herpud2 | LOC108256328,LOC108431059,LOC107666842 | other | downstream | 394866 | 234506 ~ 331761 (-) |
| LOC113523705 | LOC108261200 | other | downstream | 515158 | 199459 ~ 211469 (-) |
| nek11 | LOC108256279 | other | upstream | 315679 | 1043313 ~ 1102117 (-) |
| scap | scap,LOC107600505,LOC107717374,LOC107668298,LOC107713836 | other | upstream | 567231 | 1294865 ~ 1342071 (-) |
| G324748 | NA | other | upstream | 642842 | 1370476 ~ 1371029 (-) |
| kif13a | kif13a | other | upstream | 675630 | 1403264 ~ 1451000 (-) |
| LOC113533106 | LOC108256308,LOC108256309,LOC108261853 | other | upstream | 829382 | 1557016 ~ 1568506 (-) |
