scap (scap,LOC107600505,LOC107717374,LOC107668298,LOC107713836)


Basic Information

Item Value
gene id scap
gene name scap,LOC107600505,LOC107717374,LOC107668298,LOC107713836
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 1294865 ~ 1342071 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU384797
taaaggaaGACTGGACCTTAAgagctttttttatattttttgctagaaaaagactcaaaaaaaaaaatcaaatcgcAATGTATTTTTTACACGCGGGGTGAACGGGACGCTGAGCATCGCTGCCTGAAGaaagagagctgtgtgtgtgtgtgtttaagagcgAGATGTAGACGTTTACATGGAGAATAACtgctgatgagtgtgtgtgtgtgtgtgtgtgtGTGTGTTGAGCGAGTGTTGAGGGAGACGTgtcactttttaatatttaaaaaaatccattatttaTTAGTGATAAATTCTAACCGTTTGTACGAAAATGCTAAACTCTCATTTATTATTGTCAGATCTTTAATGTATAAAAGGCGCTGActaatttaaactttaattatataatagtatTCATTTGGACAGTGAGGGTCTGCTTTCTTTAATTGTGAAAtgagtttttctttctccagTTGGTTGGACGGGAGAGAAATGACAGCACTACTACTGAACTGATGATCATACATTaggggtgtaaacctcaggcttcaaCACGAGATATGATATTATTCCGATTCTTAATACAATGATCCGATATTTTTGACGAttccactgaatctgctacgatatgatacaatacGATTCGATTTAGTAGCCTCCGGTCGACGTGTGATGAAATTTACAGCTAATTGGCAAATGATGACaaagagaaggactattttattattttatacacaccAGTTGTTTGTCCCTTTTCTgataataatcagattaaaattGTTGCATTGATTCATTTCGGTCGTTGTCTTTAAAATCGTCCGATCGTTACGCACCTACTATGACCTGAAAGCCCGGATTCGTAACCCGATTTATCCGCCCCACgttttgttttctaaaaaagAATTGACTTTAACTCAGTAGAGAAAGAGTAGTCTCCTGTCAACAGTACGTCGTTTAACTCATTATCAGTTCACACCTTCGGTTCTTAGCGCATCAGCTTCATTCAGCTGGCAGAGTTTGtcataataattcattataacaCCATCGTGAACATAGTGTTGAAAATGATTTCTCTgtcttcatttttaaacatttttaaaatgtttttatttgtttgttgtagaAATGCAACTCCACGAGCAGCTCGCACCGCAGTCAGAGCTTAGGgatgtgctgataatcagttacATCGTACATCACGATACGATATTACCAATGTGAGCTCTACAGGAGGATCGAACCCGACCTTCTCGCCACAGCCCAGGTTTGATTACGCTAAAGATGAAGTGTAGTCCTGTCATAAACCATGAGAACAGCTTAGACTCGTAATAATGCTGAGAAGTATTTTATATGCTTGACATGCTTGAcctacatttttcctttttttctgtacatatcATAGAACGagtggaattttttatttttttttttaagtattttcttAACAGTTttgtccttttatttatttacttttttacacCTGAATGTCTACCCTGGAGTTAAAGCAGATAATCACAGACGGTTCCTTTAAAAAACACTACGCATAGAGAAGAAAGTCAGCGTCACCAGGAAATGCTTCGTGTaatcaatgtgtttttttttctcaacgaataattttttaaagccTCCTTTCAAATTTCGACGTTCGACCAAATTGTAATTTTGATGTCATTTTACTTAAACCTGACTCTGCAACATGCACTGCATTCACACCCTTAAAGCTGAGTAGAAACGCACAAAACAGCACAGATATGTTAAATTATTAGcaatatgaatgtaaatattaagGTGTGTTGCTGCGTGGAGAGATTtagtttgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtg
>XM_034298080.1
CTCAttaaaaagagtcgactctgaGTTAAATGACAAGATTCACTGAAAAGAGCAAATCGTCGCTAAAGAAAAATTTGATTCTTTTCAGTGAATCAGATCTCTTGGCTCAGCACATGAATCCGAGTCGACTCTGAGTCAAATGATTTGAGTCACTGAAAAGAGGCAAATGACTCAGATCACTTGGCTCAGctcatcaaaaaaaaagagtcgactctgaGTCGAATGATCTGATTCACTGACAAAAAGCGATCTGTTTCTTTAGTGACCACAAGATGgcggagtttgtgtgtgttttatagaaaGCAGGTTGAAGTTGTGGGttcatgttacacacacacacacacacacacacagctaactTGAATCTGTCAAAATAGTGTATATATTCGACTGTGTGCTTTAATAtcctgttttattaaaaaacaaaaaaaacacaaagctgcAGCACAGATCGTCCAGATTGTGAAATAAATCGCTTCTATAGGAAGAAGAGAAGCTTTTCAGGTGCCCGGATGAACTCCGGTGCCGCCCAGTTGGAACACACGAGCCCGATGGCTGCgagctgacctttgaccttcgACCGCCAGGATGATGTCGGTCAGAGAGCGGCTCCGCCAGAACATCTCGGCCGCCTTCTACCGGCACGGCCTGCTCTGCGCCTCCTACCCAGTTCCCATCATCCTCTTCACCTCCGCCAGCATCCTGGCCTGCTGttacCCGCTGTTGAAGCTGCCCCTGCCGGGAACAGGTCCTGTAGAGTTCACCACCGGGGTGAAGGATTACTCCGTCCCTTACCACGAGCCTCAGAGTGACCCGGGCGAGCGTCCTGATTGGTATCACGGCGCTCCAGTCGCGTACATCCAGCAGGTGTTAGTGAAGGCGGCCGTGTCTCCGTGGGACAGCAGCTTGGTGCCCGTGGACGTTTTCCGCTCGCCGCTCGGACGAGTCTTCAGCCTCCTGGAGGAGATTCGTGACCATGTTTATGCTGACAGAGGATTGGAGAGTTTGTGTCTCCAGGTGACGGATCTGTTGCCGGGGTTACGGCGCATGCAGTCTGTGCTTCCTGAACACGGCTGCCTGCTGGTTTCCCCCGGCAACTACTGGCAGAACCGACGAGACGTGTTCGACTCGGATCCAGACATCCTGAAGACCGTCCAGCAGCACGAACCCAAAGGCCTGCACACGTCCGCCACGCTGAAAGaccTGCTGTTCGGGGTTCCAGGGAAAAGCACAGGCGTCAGTCTGTACAGTAAAAAGCGAGTCGTCACCTACACCATCACCATCGCCTTCAGCAGTTATGACTCCAGgtttgtAGGCAGCCTGCGTGCCCGTCTGAAGCAGCTCCACCCGTCGGTGAACTGCAGCCTGCGTGAGGATCACATGGTGCACATCCACTTTAAAGAGGAGATCGGCATCGCTGAACTGATCCCCCTCGTCACCACCTACATCATCCTCTTCGCCTACATCTACTTCTCCACCCggaaGATCGACATGGTGAAGTCTAAGTGGGGTTTGGCCTTGGCTGCCGTGGTAACAGTGCTCAGCTCTCTGCTCATGTCTGTAGGACTCTGCACTCTGTTTGGCCTCACGCCCACGCTCAACGGAggGGAGATCTTTCCTTACCTCGTGGTCGTGATTGGGATCGAGAACGTTCTGGTCCTCACCAAGTCTGTGGTGTCGACCCCGGTGGACCTGGAGGTCAAACTTCGAATTGCACAAGgtctcAGCAGTGAGAGCtggtccatcatgaagaacatGGCCACTGAGCTGGTCATCATCCTGATTGGATACTTCACCTTGGTTCCTGCTattcagGAGTTCTGTCTGTTCGCTGTGGTGGGTCTCGTCTCCGATTTCTTCCTGCAGATGTTCTTCTTCACCACTGTGCTCTCCATCGACATCCGCCGCATGGAGctggctgATCTGAATAGGCGTCTTCCAGCCGAGGCGGGGATGCCCCCTCCCAAACCCGGCCCCTTACGGCAAAgagaagccccgccccctcctcGTCCCTCCCCCCACACCATCACGCTTCAGGCCCCGGCGTTTAGGAACCTGCGCTTACCCAAGAGGCTCCGCGTGATCTACTTCCTGGCGCGCACCCGTCTGGCACAACGCATCATCATGGTCGGCACTGTGATCTGGATCGGGATCCTGGTGTACACCGACCCCGCCGGTCTGAGGACGTACCTGGCCGCTCAGGTGTCAGAACAGAGCCCTTTGGGAGAGGCGGGGCTTCCTCCGCACCTGGGCGTGGCTCCTGTGTTCCCAGGCGGAGACCCAACTAGCACCCTCaatgtacttcctgctccagaCCCCACCCCTCTGCCCGAGAACCAATCGCAGGGAGCGGATGCCCCAGGTCCCGCCCCGTTGGTCAGCCCTCAGATCACGTGGGGTTCGGAGGACGAGGAGGTGTGGAGGCGACTGTCGTTCCGATACTGGCCCTCGCTCTTCGGCTACTATAACATCACGCTGGctaagagGTATATCAGCATCCTGCCCGTCATCCCCGTCACGCTGCACCTGAGCCCTCAGGAAGCCATCGAGATGCGACACCCTCAGGATACCCAGCATGCACCACGGGTCAGCGCCAGAACCGCGCAGCTCCAGACCGACCTCACGCTGTACAAggtTGCTGCACTGGGCCTCTTCGCCGGGGTTCTCCTGGTTCTCCTGCTCTTCTGTCTCTATCGTGTTCTCTGTCCTCGTAACTACGGACAGAATGGAGTCCAACATGGCCGCCGTCGCCGTGGAGACCTGCCCTGTGACGAGTACGGCTACTCGCCGCCGGTCAGCGAGATCTCACCACTGCTGCTCAGAGGGCATAgcatggATATCGAGTGTTTAGCGAGTGATGGTATGCTGCTGGCCAGCTGCTGTTTAGCAGGACAGATTCGTGTTTGGGACGCGCAGACCGGGGACTGTCTCACTGTCATACCTAATAatggTTTGAGAAGGAGCAGCAGTAGTGGATGTTGGGATCAGCGTGACGGCTGGGATCACTACGACCCCGACTCCTCCCCCAGGGCGGAGTCTTGCACCACGTCCACGCCGGTTAGCGAGTATGCGGTGCGCCGGAGGCCGACCCGCCCCGCCATGTTTGTGGACCAGCCGGACCTCACGGCGCTGATAGACACCAACTTCAGCGAGCTGCCTCCATCACACGCGCCCTCAGACTGCGGCTTCGACTTCGGCGGCCTGGTGGAGAGGGCGTATAAAGAGCACGAGGCGACGTCGCCTCCGGCAACAATGCCCACGCCGCTTCCCCCGACTCCGCCCACTCCACCGGCCCCGCCCACTGAGAGGCTGAGCATGCCGTCAGGAGACTGGGAGAGTTCAGTGTGGTCCATGGAGCTCAGGGGAAACCTGATCGCTGCAGGGAGGAGCAACGGCAAACTGGAGTTGTGGGATGCAGTGGAGGGACTGCTGCGGTGTTGCAATGAAGACGGATCCTCGGGAATCACCGCCCTGGCTTTCCTTAACAATAGgatCGTTGCAGCTCGTCTGGATGGTTCTCTTGATTTTTTCACCGTGGACATCAACAAGCCGCTGGGTTTACTGCAGCACcgagggcCCCCGGGTTGTAGTAGTCTGCCGCCGTCGCCGTGTTACAGCAGCGAGGATGCGATCAGCTGCCAGCTAACACGCTCGGTTCAGTGCGCTCACCAGAAACCCATCACTGTGCTCAAAGCTGCAGCGGGTCGAGTCGTCACAGGCAGCCAGGACCACACCGTCAGAGTGTATCGTCTGGAGGATTCCTGCTGCCTCTTCACCCTGCAGGGTCACTCAGGTGGCATCACCGCCATTTATATAGACCAGacgATGGTCCTGGCCAGCGGGGGGCAGGATGGTGCCATCTGCTTATGGGACGTCCTCACAGGAAGTCGTGTGAGCCATGTTTATGGTCACCGCGGCGATGTGACGTCGCTGGTCTGCACTACTTCCTGTGTGATCAGCAGCGGGTTGGACGATCTCATCTGCATCTGGGACCGGAGCACCGGCATCAAGCTCTACTCCATACAGCAGGAAGTGGGCTGTGGCGCCAGTCTGGCAGTGATTTCCGAGAGTTTATTAGTGACCGGAGGTAACGGCTGCGTGTCGTTCTGGGACCTGAACTACGGGGACCTGCTGCAGACGGTGTATCTGGGTCAGAACAGCGAGGGGCAGCACGTGCGGCAGCTCCTCGTGCTGGAAAACGCCGCCATCGTGTGTGACTTTGGCAGCGAGCTCAGCCTCGTCTATGTGCCCTCTGTACTGGAGAAGCtggactaaacacacacacacacacagaagtttagaagtgtgtgtgtgtgatgtgatggacTGTCGTCTCTGCTTGGgcttttacttcctgtttctttcaGGAAAAGCAGGAAGTGCAGGTTTGGACAGAAATtgtgtacaaataaaaatacacaatgatTTGAAagatgagagaatgagagagagagagagagagagagagtgagagagtttTAAAGCcctggggattttttttttaataacatgccagtagtGGGACAGAAATAGGGCatgacatttgtgtgtgtatgtgtgagttcttgctttttttttctaaaggaaGACTGGACCTTAAgagctttttttatattttttgctagaaaaagactcaaaaaaaaaaatcaaatcgcAATGTATTTTTTACACGCGGGGTGAACGGGACGCTGAGCATCGCTGCCTGAAGaaagagagctgtgtgtgtgtgtgtttaagagcgAGATGTAGACGTTTACATGGAGAATAACtgctgatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagagaaagaattGTTCCTAAGGCTTACTGTAATTAGATGAACCTGTAAAGGAGGTGTGTTGAGCGAGTGTTGAGGGAGACGTgtcactttttaatatttaaaaaaatccattatttaTTAGTGATAAATTCTAACCGTTTGTACGAAAATGCTAAACTCTCATTTATTATTGTCAGATCTTTAATGTATAAAAGGCGCTGActaatttaaactttaattatataatagtatTCATTTGGACAGTGAGGGTCTGCTTTCTTTAATTGTGAAAtgagtttttctttctccagTTGGTTGGACGGGAGAGAAATGACAGCACTACTACTGAACTGATGATCATACATTaggggtgtaaacctcaggcttcaaCACGAGATATGATATTATTCCGATTCTTAATACAATGATCCGATATTTTTGACGAttccactgaatctgctacgatatgatacaatacGATTCGATTTAGTAGCCTCCGGTCGACGTGTGATGAAATTTACAGCTAATTGGCAAATGATGACaaagagaaggactattttattattttatacacaccAGTTGTTTGTCCCTTTTCTgataataatcagattaaaattGTTGCATTGATTCATTTCGGTCGTTGTCTTTAAAATCGTCCGATCGTTACGCACCTACTATGACCTGAAAGCCCGGATTCGTAACCCGATTTATCCGCCCCACgttttgttttctaaaaaagAATTGACTTTAACTCAGTAGAGAAAGAGTAGTCTCCTGTCAACAGTACGTCGTTTAACTCATTATCAGTTCACACCTTCGGTTCTTAGCGCATCAGCTTCATTCAGCTGGCAGAGTTTGtcataataattcattataacaCCATCGTGAACATAGTGTTGAAAATGATTTCTCTgtcttcatttttaaacatttttaaaatgtttttatttgtttgttgtagaAATGCAACTCCACGAGCAGCTCGCACCGCAGTCAGAGCTTAGGgatgtgctgataatcagttacATCGTACATCACGATACGATATTACCAATGTGAGCTCTACAGGAGGATCGAACCCGACCTTCTCGCCACAGCCCAGGTTTGATTACGCTAAAGATGAAGTGTAGTCCTGTCATAAACCATGAGAACAGCTTAGACTCGTAATAATGCTGAGAAGTATTTTATATGCTTGACATGCTTGAcctacatttttcctttttttctgtacatatcATAGAACGagtggaattttttatttttttttttaagtattttcttAACAGTTttgtccttttatttatttacttttttacacCTGAATGTCTACCCTGGAGTTAAAGCAGATAATCACAGACGGTTCCTTTAAAAAACACTACGCATAGAGAAGAAAGTCAGCGTCACCAGGAAATGCTTCGTGTaatcaatgtgtttttttttctcaacgaataattttttaaagccTCCTTTCAAATTTCGACGTTCGACCAAATTGTAATTTTGATGTCATTTTACTTAAACCTGACTCTGCAACATGCACTGCATTCACACCCTTAAAGCTGAGTAGAAACGCACAAAACAGCACAGATATGTTAAATTATTAGcaatatgaatgtaaatattaagGTGTGTTGCTGCGTGGAGAGATTtagtttgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgcagtTAGTTTCCAAAGCTGTGTAGTTTGTTTGGTAGAAATGTGAATGATGTTTTTatccatatttctttcttttgtgtgtttttagatgAGTTGAGAATGACAGTAGCACAGATACTGGGGTTattagagatgatgatgatgatgatgatggtgatgatgatgatgagctcTAAAGAAATGCGAGACGGTGTGTTTCGAAGTGTGTGTTCCATTAAGTAGGgttaggctgctttcacacttgatGTCAATGAACTTTTCTGAAATGTTAAATCTTTTTCAATTTTACAAGCTTTGctatggccaaaaaaaaaaaaaattctaaaatcataattaaattattaacaaattattcTATCTGCATCCATGAATTCCGCATGCCTTTTTGTTTTGGTAAAATGTGCGCTGGTTGTTGAGAAAAAACTCCAAGTGTGAAAGCATCCTTCATGTATGTTTAGCATTTAAGCTTTAGAAAGTTCATTTGTGAAATGCACCTTCCATTCCAAGTTTGAGTTTTTCAGTCAAAAATTAGGGCTATAAtatcatggatttttttttttttttttttactacctGTTCAAAAACAGGAACCAAACTTGTGGTTCTGGTTCATTCTCCATTAACTTAAGGAATGACAGTGACTGTTAAAGTGACTGCATCATCATTACAACCACGATAACGCACTTGTTAAGTTCAGCATGGTGATTAAATGTTGGTTCTTTGGTTCAGAAGTTCAGATCAGCTGTAGCTAAATATCTGATGTATCGTTTCACAGATGAAGGAGTTTTAAATTTCCACGACTTGTCTTTCATCGGAAACAGCAGCACCAACAACAAACCAGACTGTTCTGGTCTTTTTTGTGTGATACAAGACCAATTAGCTGTAAACAGAAGGCCATCTTGATGCCAAGCCTGAGCTTTTTTGATGTACCAAAAATACTCATTGTACTGGCTCCTTTGGTACCGGACTAGTGGAGGaaaaatttgattgaaaaaGCACTGGTCCACTTTTCTGGTGCTAAAGGCTCTACTTTGTGCAGTGGATAAACGCATGCGGATTAAATAAGGCTGTTAATTAAGGATGGGCAATGTGACCATATGCAAGATACAATCTTCCGACCGACTGCACGTTTCACATACATGGTTATGTGCAGGGCCTGAAAGTCTGGTGAAGTTCAGAATTTGATTTCCAAATCTGGAAAAATTGGGAAGTTAGCGaatgttttggggaaaaaaaacagatgtttgTTCAAGTTAGATCTAAGATACCAGTAAGGTTCTACATCACTTGTCCATAGACATTCCCTTATTTTCAGCTTCTAAAGAATGTGAAACCTCAATGTGAATAGTCTGAATTGGAAAAGATCAGGAtgtttttcactgaaatttCAGGAACTTCACTAGAGACAAATTAAATCCCATTAAACCCAGTGGTGTCAGACCATCTAActaaatttgcatatttctgaGCAAACAACAGTAGTATACTTGTGTAAAACCAATTGCGCACTGTgtcatgaaaataatttttgccATTCCTGGTACTGACTGGGTTTCCTAAAATAGATGCTTGGAAATTTCATACACCCTTAATCAGATTACCATGcccactatttaaaaaaaatcagtcacaCATGTTTTAGGCCAGTGTCGGTATGCAAATGCTGGAAAGTTGCACTGTATACTTCAGGAAGGAGGGTACAGCAAATACTCTGTTCCATTTTTATTAACAGGGCAAAGGTTTTTGTACTAATATGCAAATAAAGGTTTACACACCTTGGTTA
>XM_034298081.1
TCCGTCCCTTACCACGAGCCTCAGAGTGACCCGGGCGAGCGTCCTGATTGGGTAACGCAGGCCAGTTagattctgaccaatcagaattTATCACGGCGCTCCAGTCGCGTACATCCAGCAGGTGTTAGTGAAGGCGGCCGTGTCTCCGTGGGACAGCAGCTTGGTGCCCGTGGACGTTTTCCGCTCGCCGCTCGGACGAGTCTTCAGCCTCCTGGAGGAGATTCGTGACCATGTTTATGCTGACAGAGGATTGGAGAGTTTGTGTCTCCAGGTGACGGATCTGTTGCCGGGGTTACGGCGCATGCAGTCTGTGCTTCCTGAACACGGCTGCCTGCTGGTTTCCCCCGGCAACTACTGGCAGAACCGACGAGACGTGTTCGACTCGGATCCAGACATCCTGAAGACCGTCCAGCAGCACGAACCCAAAGGCCTGCACACGTCCGCCACGCTGAAAGaccTGCTGTTCGGGGTTCCAGGGAAAAGCACAGGCGTCAGTCTGTACAGTAAAAAGCGAGTCGTCACCTACACCATCACCATCGCCTTCAGCAGTTATGACTCCAGgtttgtAGGCAGCCTGCGTGCCCGTCTGAAGCAGCTCCACCCGTCGGTGAACTGCAGCCTGCGTGAGGATCACATGGTGCACATCCACTTTAAAGAGGAGATCGGCATCGCTGAACTGATCCCCCTCGTCACCACCTACATCATCCTCTTCGCCTACATCTACTTCTCCACCCggaaGATCGACATGGTGAAGTCTAAGTGGGGTTTGGCCTTGGCTGCCGTGGTAACAGTGCTCAGCTCTCTGCTCATGTCTGTAGGACTCTGCACTCTGTTTGGCCTCACGCCCACGCTCAACGGAggGGAGATCTTTCCTTACCTCGTGGTCGTGATTGGGATCGAGAACGTTCTGGTCCTCACCAAGTCTGTGGTGTCGACCCCGGTGGACCTGGAGGTCAAACTTCGAATTGCACAAGgtctcAGCAGTGAGAGCtggtccatcatgaagaacatGGCCACTGAGCTGGTCATCATCCTGATTGGATACTTCACCTTGGTTCCTGCTattcagGAGTTCTGTCTGTTCGCTGTGGTGGGTCTCGTCTCCGATTTCTTCCTGCAGATGTTCTTCTTCACCACTGTGCTCTCCATCGACATCCGCCGCATGGAGctggctgATCTGAATAGGCGTCTTCCAGCCGAGGCGGGGATGCCCCCTCCCAAACCCGGCCCCTTACGGCAAAgagaagccccgccccctcctcGTCCCTCCCCCCACACCATCACGCTTCAGGCCCCGGCGTTTAGGAACCTGCGCTTACCCAAGAGGCTCCGCGTGATCTACTTCCTGGCGCGCACCCGTCTGGCACAACGCATCATCATGGTCGGCACTGTGATCTGGATCGGGATCCTGGTGTACACCGACCCCGCCGGTCTGAGGACGTACCTGGCCGCTCAGGTGTCAGAACAGAGCCCTTTGGGAGAGGCGGGGCTTCCTCCGCACCTGGGCGTGGCTCCTGTGTTCCCAGGCGGAGACCCAACTAGCACCCTCaatgtacttcctgctccagaCCCCACCCCTCTGCCCGAGAACCAATCGCAGGGAGCGGATGCCCCAGGTCCCGCCCCGTTGGTCAGCCCTCAGATCACGTGGGGTTCGGAGGACGAGGAGGTGTGGAGGCGACTGTCGTTCCGATACTGGCCCTCGCTCTTCGGCTACTATAACATCACGCTGGctaagagGTATATCAGCATCCTGCCCGTCATCCCCGTCACGCTGCACCTGAGCCCTCAGGAAGCCATCGAGATGCGACACCCTCAGGATACCCAGCATGCACCACGGGTCAGCGCCAGAACCGCGCAGCTCCAGACCGACCTCACGCTGTACAAggtTGCTGCACTGGGCCTCTTCGCCGGGGTTCTCCTGGTTCTCCTGCTCTTCTGTCTCTATCGTGTTCTCTGTCCTCGTAACTACGGACAGAATGGAGTCCAACATGGCCGCCGTCGCCGTGGAGACCTGCCCTGTGACGAGTACGGCTACTCGCCGCCGGTCAGCGAGATCTCACCACTGCTGCTCAGAGGGCATAgcatggATATCGAGTGTTTAGCGAGTGATGGTATGCTGCTGGCCAGCTGCTGTTTAGCAGGACAGATTCGTGTTTGGGACGCGCAGACCGGGGACTGTCTCACTGTCATACCTAATAatggTTTGAGAAGGAGCAGCAGTAGTGGATGTTGGGATCAGCGTGACGGCTGGGATCACTACGACCCCGACTCCTCCCCCAGGGCGGAGTCTTGCACCACGTCCACGCCGGTTAGCGAGTATGCGGTGCGCCGGAGGCCGACCCGCCCCGCCATGTTTGTGGACCAGCCGGACCTCACGGCGCTGATAGACACCAACTTCAGCGAGCTGCCTCCATCACACGCGCCCTCAGACTGCGGCTTCGACTTCGGCGGCCTGGTGGAGAGGGCGTATAAAGAGCACGAGGCGACGTCGCCTCCGGCAACAATGCCCACGCCGCTTCCCCCGACTCCGCCCACTCCACCGGCCCCGCCCACTGAGAGGCTGAGCATGCCGTCAGGAGACTGGGAGAGTTCAGTGTGGTCCATGGAGCTCAGGGGAAACCTGATCGCTGCAGGGAGGAGCAACGGCAAACTGGAGTTGTGGGATGCAGTGGAGGGACTGCTGCGGTGTTGCAATGAAGACGGATCCTCGGGAATCACCGCCCTGGCTTTCCTTAACAATAGgatCGTTGCAGCTCGTCTGGATGGTTCTCTTGATTTTTTCACCGTGGACATCAACAAGCCGCTGGGTTTACTGCAGCACcgagggcCCCCGGGTTGTAGTAGTCTGCCGCCGTCGCCGTGTTACAGCAGCGAGGATGCGATCAGCTGCCAGCTAACACGCTCGGTTCAGTGCGCTCACCAGAAACCCATCACTGTGCTCAAAGCTGCAGCGGGTCGAGTCGTCACAGGCAGCCAGGACCACACCGTCAGAGTGTATCGTCTGGAGGATTCCTGCTGCCTCTTCACCCTGCAGGGTCACTCAGGTGGCATCACCGCCATTTATATAGACCAGacgATGGTCCTGGCCAGCGGGGGGCAGGATGGTGCCATCTGCTTATGGGACGTCCTCACAGGAAGTCGTGTGAGCCATGTTTATGGTCACCGCGGCGATGTGACGTCGCTGGTCTGCACTACTTCCTGTGTGATCAGCAGCGGGTTGGACGATCTCATCTGCATCTGGGACCGGAGCACCGGCATCAAGCTCTACTCCATACAGCAGGAAGTGGGCTGTGGCGCCAGTCTGGCAGTGATTTCCGAGAGTTTATTAGTGACCGGAGGTAACGGCTGCGTGTCGTTCTGGGACCTGAACTACGGGGACCTGCTGCAGACGGTGTATCTGGGTCAGAACAGCGAGGGGCAGCACGTGCGGCAGCTCCTCGTGCTGGAAAACGCCGCCATCGTGTGTGACTTTGGCAGCGAGCTCAGCCTCGTCTATGTGCCCTCTGTACTGGAGAAGCtggactaaacacacacacacacacagaagtttagaagtgtgtgtgtgtgatgtgatggacTGTCGTCTCTGCTTGGgcttttacttcctgtttctttcaGGAAAAGCAGGAAGTGCAGGTTTGGACAGAAATtgtgtacaaataaaaatacacaatgatTTGAAagatgagagaatgagagagagagagagagagagagagtgagagagtttTAAAGCcctggggattttttttttaataacatgccagtagtGGGACAGAAATAGGGCatgacatttgtgtgtgtatgtgtgagttcttgctttttttttctaaaggaaGACTGGACCTTAAgagctttttttatattttttgctagaaaaagactcaaaaaaaaaaatcaaatcgcAATGTATTTTTTACACGCGGGGTGAACGGGACGCTGAGCATCGCTGCCTGAAGaaagagagctgtgtgtgtgtgtgtttaagagcgAGATGTAGACGTTTACATGGAGAATAACtgctgatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagagaaagaattGTTCCTAAGGCTTACTGTAATTAGATGAACCTGTAAAGGAGGTGTGTTGAGCGAGTGTTGAGGGAGACGTgtcactttttaatatttaaaaaaatccattatttaTTAGTGATAAATTCTAACCGTTTGTACGAAAATGCTAAACTCTCATTTATTATTGTCAGATCTTTAATGTATAAAAGGCGCTGActaatttaaactttaattatataatagtatTCATTTGGACAGTGAGGGTCTGCTTTCTTTAATTGTGAAAtgagtttttctttctccagTTGGTTGGACGGGAGAGAAATGACAGCACTACTACTGAACTGATGATCATACATTaggggtgtaaacctcaggcttcaaCACGAGATATGATATTATTCCGATTCTTAATACAATGATCCGATATTTTTGACGAttccactgaatctgctacgatatgatacaatacGATTCGATTTAGTAGCCTCCGGTCGACGTGTGATGAAATTTACAGCTAATTGGCAAATGATGACaaagagaaggactattttattattttatacacaccAGTTGTTTGTCCCTTTTCTgataataatcagattaaaattGTTGCATTGATTCATTTCGGTCGTTGTCTTTAAAATCGTCCGATCGTTACGCACCTACTATGACCTGAAAGCCCGGATTCGTAACCCGATTTATCCGCCCCACgttttgttttctaaaaaagAATTGACTTTAACTCAGTAGAGAAAGAGTAGTCTCCTGTCAACAGTACGTCGTTTAACTCATTATCAGTTCACACCTTCGGTTCTTAGCGCATCAGCTTCATTCAGCTGGCAGAGTTTGtcataataattcattataacaCCATCGTGAACATAGTGTTGAAAATGATTTCTCTgtcttcatttttaaacatttttaaaatgtttttatttgtttgttgtagaAATGCAACTCCACGAGCAGCTCGCACCGCAGTCAGAGCTTAGGgatgtgctgataatcagttacATCGTACATCACGATACGATATTACCAATGTGAGCTCTACAGGAGGATCGAACCCGACCTTCTCGCCACAGCCCAGGTTTGATTACGCTAAAGATGAAGTGTAGTCCTGTCATAAACCATGAGAACAGCTTAGACTCGTAATAATGCTGAGAAGTATTTTATATGCTTGACATGCTTGAcctacatttttcctttttttctgtacatatcATAGAACGagtggaattttttatttttttttttaagtattttcttAACAGTTttgtccttttatttatttacttttttacacCTGAATGTCTACCCTGGAGTTAAAGCAGATAATCACAGACGGTTCCTTTAAAAAACACTACGCATAGAGAAGAAAGTCAGCGTCACCAGGAAATGCTTCGTGTaatcaatgtgtttttttttctcaacgaataattttttaaagccTCCTTTCAAATTTCGACGTTCGACCAAATTGTAATTTTGATGTCATTTTACTTAAACCTGACTCTGCAACATGCACTGCATTCACACCCTTAAAGCTGAGTAGAAACGCACAAAACAGCACAGATATGTTAAATTATTAGcaatatgaatgtaaatattaagGTGTGTTGCTGCGTGGAGAGATTtagtttgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgcagtTAGTTTCCAAAGCTGTGTAGTTTGTTTGGTAGAAATGTGAATGATGTTTTTatccatatttctttcttttgtgtgtttttagatgAGTTGAGAATGACAGTAGCACAGATACTGGGGTTattagagatgatgatgatgatgatgatggtgatgatgatgatgagctcTAAAGAAATGCGAGACGGTGTGTTTCGAAGTGTGTGTTCCATTAAGTAGGgttaggctgctttcacacttgatGTCAATGAACTTTTCTGAAATGTTAAATCTTTTTCAATTTTACAAGCTTTGctatggccaaaaaaaaaaaaaattctaaaatcataattaaattattaacaaattattcTATCTGCATCCATGAATTCCGCATGCCTTTTTGTTTTGGTAAAATGTGCGCTGGTTGTTGAGAAAAAACTCCAAGTGTGAAAGCATCCTTCATGTATGTTTAGCATTTAAGCTTTAGAAAGTTCATTTGTGAAATGCACCTTCCATTCCAAGTTTGAGTTTTTCAGTCAAAAATTAGGGCTATAAtatcatggatttttttttttttttttttactacctGTTCAAAAACAGGAACCAAACTTGTGGTTCTGGTTCATTCTCCATTAACTTAAGGAATGACAGTGACTGTTAAAGTGACTGCATCATCATTACAACCACGATAACGCACTTGTTAAGTTCAGCATGGTGATTAAATGTTGGTTCTTTGGTTCAGAAGTTCAGATCAGCTGTAGCTAAATATCTGATGTATCGTTTCACAGATGAAGGAGTTTTAAATTTCCACGACTTGTCTTTCATCGGAAACAGCAGCACCAACAACAAACCAGACTGTTCTGGTCTTTTTTGTGTGATACAAGACCAATTAGCTGTAAACAGAAGGCCATCTTGATGCCAAGCCTGAGCTTTTTTGATGTACCAAAAATACTCATTGTACTGGCTCCTTTGGTACCGGACTAGTGGAGGaaaaatttgattgaaaaaGCACTGGTCCACTTTTCTGGTGCTAAAGGCTCTACTTTGTGCAGTGGATAAACGCATGCGGATTAAATAAGGCTGTTAATTAAGGATGGGCAATGTGACCATATGCAAGATACAATCTTCCGACCGACTGCACGTTTCACATACATGGTTATGTGCAGGGCCTGAAAGTCTGGTGAAGTTCAGAATTTGATTTCCAAATCTGGAAAAATTGGGAAGTTAGCGaatgttttggggaaaaaaaacagatgtttgTTCAAGTTAGATCTAAGATACCAGTAAGGTTCTACATCACTTGTCCATAGACATTCCCTTATTTTCAGCTTCTAAAGAATGTGAAACCTCAATGTGAATAGTCTGAATTGGAAAAGATCAGGAtgtttttcactgaaatttCAGGAACTTCACTAGAGACAAATTAAATCCCATTAAACCCAGTGGTGTCAGACCATCTAActaaatttgcatatttctgaGCAAACAACAGTAGTATACTTGTGTAAAACCAATTGCGCACTGTgtcatgaaaataatttttgccATTCCTGGTACTGACTGGGTTTCCTAAAATAGATGCTTGGAAATTTCATACACCCTTAATCAGATTACCATGcccactatttaaaaaaaatcagtcacaCATGTTTTAGGCCAGTGTCGGTATGCAAATGCTGGAAAGTTGCACTGTATACTTCAGGAAGGAGGGTACAGCAAATACTCTGTTCCATTTTTATTAACAGGGCAAAGGTTTTTGTACTAATATGCAAATAAAGGTTTACACACCTTGGTTA

Function

symbol description
scap Predicted to enable sterol binding activity. Acts upstream of or within lipid metabolic process and lipid storage. Predicted to be located in ER to Golgi transport vesicle membrane; Golgi membrane; and endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human SCAP (SREBF chaperone).

NR:

description
PREDICTED: sterol regulatory element-binding protein cleavage-activating protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384797 False 1835 lncRNA 0.37 3 1294865 1314580
XM_034298080.1 True 8285 mRNA 0.47 23 1310875 1342071
XM_034298081.1 False 7539 mRNA 0.47 21 1310875 1330952

Neighbor

gene id symbol gene type direction distance location
LOC113532917 NA coding downstream 8986 1281446 ~ 1285879 (-)
LOC113533061 LOC108256273 coding downstream 19026 1273393 ~ 1275839 (-)
LOC117595783 LOC108256266,LOC108256277,LOC108256270,LOC108256272,LOC108256276,LOC108261760,LOC108261539 coding downstream 60583 1125904 ~ 1234282 (-)
si:dkey-11p23.7 siglec15 coding downstream 374956 915919 ~ 919909 (-)
LOC113525074 NA coding downstream 392603 897326 ~ 902262 (-)
elp6 elp6 coding upstream 908 1342979 ~ 1346644 (-)
sacm1lb sacm1lb,sacm1l,LOC108256262,LOC108412214,LOC107673333,LOC107709536 coding upstream 5958 1348029 ~ 1359488 (-)
gpatch3 gpatch3 coding upstream 18986 1361057 ~ 1368677 (-)
smpd5 LOC108256263 coding upstream 27683 1369754 ~ 1387049 (-)
LOC113532867 NA coding upstream 45686 1387757 ~ 1391259 (-)
G324726 NA non-coding downstream 108788 1119771 ~ 1186077 (-)
G324731 NA non-coding downstream 125534 1144586 ~ 1169331 (-)
G324729 LOC108256269,LOC108256268,LOC108256164,LOC108256276 non-coding downstream 167248 1126844 ~ 1127617 (-)
G324649 NA non-coding downstream 339473 880609 ~ 955392 (-)
G324650 NA non-coding downstream 412579 881639 ~ 882286 (-)
LOC117595768 NA non-coding upstream 327031 1669102 ~ 1674907 (-)
G324970 NA non-coding upstream 381939 1724010 ~ 1724764 (-)
G324980 NA non-coding upstream 405586 1747657 ~ 1748008 (-)
G325003 NA non-coding upstream 555640 1897711 ~ 1898181 (-)
G325056 NA non-coding upstream 564872 1906943 ~ 1948211 (-)
nek11 LOC108256279 other downstream 192748 1043313 ~ 1102117 (-)
G324579 NA other downstream 567231 726627 ~ 727634 (-)
dyrk1b dyrk1b,LOC108256247,LOC107685988,LOC107719113,LOC107592201 other downstream 719594 549060 ~ 575271 (-)
smarcc1a smarcc1,LOC107600486,LOC107666814,LOC107686050 other downstream 840042 374199 ~ 454823 (-)
slc4a7 slc4a7,LOC108256322,LOC107686077,LOC107666816 other downstream 898292 350738 ~ 396573 (-)
G324748 NA other upstream 28405 1370476 ~ 1371029 (-)
kif13a kif13a other upstream 61193 1403264 ~ 1451000 (-)
LOC113533106 LOC108256308,LOC108256309,LOC108261853 other upstream 214945 1557016 ~ 1568506 (-)
G325145 mtmr11 other upstream 746188 2088259 ~ 2097435 (-)
LOC113532533 LOC108256344 other upstream 1887950 3230021 ~ 3251447 (-)

Expression


Co-expression Network