G329447


Basic Information

Item Value
gene id G329447
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 8942137 ~ 8942358 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU390299
gAAATTCTTATCTgccgtctcatattcatcttttgatctcaaacacaaatgtcttcagtgtatagtaaaaacaaaagaattagcctTGTCATTCCAATTCTTTTAGAAAGGACTGAAACTAGAAAACCAATGTGAGTGAGCAAAGTGATGGCAAAAACCAAAGCAGCTAACACTATTTAAATATCATAATGTATTGACTGCATGACCTTAGCGAAGTAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390299 True 222 lncRNA 0.34 1 8942137 8942358

Neighbor

gene id symbol gene type direction distance location
si:dkey-197c15.6 NA coding downstream 105306 8830847 ~ 8836831 (-)
cavin1b LOC108426559,LOC103029568,LOC108256430,LOC107664665,LOC107742253,LOC107550021,LOC107655802,LOC107755710 coding downstream 276282 8652432 ~ 8665855 (-)
rpgrip1 NA coding downstream 295628 8589264 ~ 8646509 (-)
LOC113532599 nipal2,LOC107731686,LOC107594621,LOC107705020 coding downstream 619977 8308408 ~ 8322160 (-)
fzd6 fzd6 coding downstream 657417 8273940 ~ 8284720 (-)
txndc5 txndc5 coding upstream 2027 8944385 ~ 8955194 (-)
bloc1s5 bloc1s5 coding upstream 20414 8962772 ~ 8967175 (-)
mak mak coding upstream 509016 9451374 ~ 9472412 (-)
gcm2 gcm2,LOC107664656,LOC107707735,LOC107654664,LOC107552658 coding upstream 561779 9504137 ~ 9510189 (-)
elovl2 elovl2,LOC101268971 coding upstream 610237 9552595 ~ 9572205 (-)
G329438 NA non-coding downstream 21124 8920280 ~ 8921013 (-)
G329404 NA non-coding downstream 90825 8847485 ~ 8851312 (-)
LOC117595776 NA non-coding downstream 103143 8823190 ~ 8838994 (-)
G329290 NA non-coding downstream 191093 8750842 ~ 8751044 (-)
G329211 NA non-coding downstream 315688 8619227 ~ 8626449 (-)
G329461 NA non-coding upstream 68103 9010461 ~ 9010665 (-)
LOC117595798 NA non-coding upstream 106882 9049240 ~ 9050902 (-)
LOC117595799 NA non-coding upstream 114857 9057215 ~ 9081783 (-)
G329531 NA non-coding upstream 407108 9349466 ~ 9349837 (-)
G329686 NA non-coding upstream 633026 9575384 ~ 9575695 (-)
sec61b sec61b,LOC102796100 other downstream 1555790 7378731 ~ 7386347 (-)
G328342 LOC108256401 other downstream 1879709 7056794 ~ 7062428 (-)
arhgap33 LOC108256528,LOC108438098,LOC106605587 other downstream 2558549 6256403 ~ 6383588 (-)
zfpm2a zfpm2,zfpm2a,LOC107714317,LOC107592441 other downstream 2963758 5829474 ~ 5978379 (-)
ubr5 ubr5 other downstream 3964610 4932155 ~ 4977527 (-)
LOC113541109 NA other upstream 1209139 10151497 ~ 10156800 (-)
G330185 NA other upstream 1580374 10522732 ~ 10523263 (-)
ackr4b ackr4 other upstream 1980768 10923126 ~ 10930775 (-)
G330379 NA other upstream 2139910 11082268 ~ 11083151 (-)
cdv3 cdv3 other upstream 3001696 11944054 ~ 11996700 (-)

Expression


Co-expression Network