G329722 (gnal,LOC107742053,LOC107702493)


Basic Information

Item Value
gene id G329722
gene name gnal,LOC107742053,LOC107702493
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 9621711 ~ 9622672 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU390617
AGCTATTAGTAATCAGTTGGACACAGCGTGCTTGTCGCCATGCTGGCCGACTCTCGAgcactgtattaaaaaataaagcgcAAGCTGAGGCGTCGCTTATCATTAAAAATTATAGCAAACGATTACCGGTGTATCGTATCAAAACAGCAGGCCAAATCTGGGACCACACCAGGATTAAAAATGGATAACAAATACTTACTCTGCGTTAAAGCCGTTGACGTGCAAGATCCTCATCTGCTTGACAATCGTACTCTTTCCGGATTCTCCAGCCCCTTTGACAGCTAATAAAAGCAGCCGGTGTGTGGCTTTGTAAGCCTGCCTTTCCTTCTGTAATTGTTTCTCGATCTTTTTATTCGCCTCTCGTTGAGCCTTCTCGTCAATGCGCTGGTCTTCGGTCTTGCTGTTCCCCAAACAGCCCATCTTCCGCTAAGCTCTCCGCGCAAACGCAACGTTACAGAATGAACGCTAATGTAAAGTATTACACTAAAGATCAcgcgaaaaaaaaaacaaggcgggaaaaaaaataatccgTCGCTTATCCGTCGCCGTCGGTAAAAATATGGTTTCGCTTTAACTCAAACAGAATCCGAGCAGTTAAATCAGTTAAATCGTATAAAAATGTTCATCCTCTTAGAATGAAGAACGACGCGCGAATAAGTGGGAGTAAGAGGAAGCAGATCAGGGCTGAAAGTGGGATACGTCCGACGGCTCCGCTTTCGCTCCTCTTCCCCCGTCG

Function

symbol description
gnal Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in brain; gill; head; and peripheral olfactory organ. Human ortholog(s) of this gene implicated in dystonia 25. Orthologous to human GNAL (G protein subunit alpha L).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390617 True 736 lncRNA 0.45 2 9621711 9622672

Neighbor

gene id symbol gene type direction distance location
elovl2 elovl2,LOC101268971 coding downstream 49506 9552595 ~ 9572205 (-)
gcm2 gcm2,LOC107664656,LOC107707735,LOC107654664,LOC107552658 coding downstream 111522 9504137 ~ 9510189 (-)
mak mak coding downstream 149299 9451374 ~ 9472412 (-)
bloc1s5 bloc1s5 coding downstream 654536 8962772 ~ 8967175 (-)
txndc5 txndc5 coding downstream 666517 8944385 ~ 8955194 (-)
mppe1 mppe1 coding upstream 64883 9687555 ~ 9717566 (-)
LOC113532851 NA coding upstream 173662 9796334 ~ 9819533 (-)
LOC113541360 NA coding upstream 662162 10284834 ~ 10284937 (-)
si:dkey-12l12.1 NA coding upstream 1353102 10975774 ~ 10980139 (-)
LOC113541107 NA coding upstream 1483742 11106414 ~ 11109555 (-)
G329686 NA non-coding downstream 46016 9575384 ~ 9575695 (-)
G329531 NA non-coding downstream 271874 9349466 ~ 9349837 (-)
LOC117595799 NA non-coding downstream 539928 9057215 ~ 9081783 (-)
LOC117595798 NA non-coding downstream 570809 9049240 ~ 9050902 (-)
G329461 NA non-coding downstream 611046 9010461 ~ 9010665 (-)
G329756 NA non-coding upstream 95490 9718162 ~ 9719292 (-)
G329755 NA non-coding upstream 96993 9719665 ~ 9723670 (-)
G329761 NA non-coding upstream 106196 9728868 ~ 9731870 (-)
G329762 NA non-coding upstream 110225 9732897 ~ 9733512 (-)
G329764 NA non-coding upstream 111521 9734193 ~ 9734740 (-)
sec61b sec61b,LOC102796100 other downstream 2235364 7378731 ~ 7386347 (-)
G328342 LOC108256401 other downstream 2559283 7056794 ~ 7062428 (-)
arhgap33 LOC108256528,LOC108438098,LOC106605587 other downstream 3238123 6256403 ~ 6383588 (-)
zfpm2a zfpm2,zfpm2a,LOC107714317,LOC107592441 other downstream 3643332 5829474 ~ 5978379 (-)
ubr5 ubr5 other downstream 4644184 4932155 ~ 4977527 (-)
LOC113541109 NA other upstream 528825 10151497 ~ 10156800 (-)
G330185 NA other upstream 900060 10522732 ~ 10523263 (-)
ackr4b ackr4 other upstream 1300454 10923126 ~ 10930775 (-)
G330379 NA other upstream 1459596 11082268 ~ 11083151 (-)
cdv3 cdv3 other upstream 2321382 11944054 ~ 11996700 (-)

Expression


Co-expression Network