Gene
RNA
| Item | Value |
|---|---|
| gene id | G329756 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 9718162 ~ 9719292 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU390658 | True | 1131 | lncRNA | 0.40 | 1 | 9718162 | 9719292 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mppe1 | mppe1 | coding | downstream | 596 | 9687555 ~ 9717566 (-) |
| elovl2 | elovl2,LOC101268971 | coding | downstream | 145957 | 9552595 ~ 9572205 (-) |
| gcm2 | gcm2,LOC107664656,LOC107707735,LOC107654664,LOC107552658 | coding | downstream | 207973 | 9504137 ~ 9510189 (-) |
| mak | mak | coding | downstream | 245750 | 9451374 ~ 9472412 (-) |
| bloc1s5 | bloc1s5 | coding | downstream | 750987 | 8962772 ~ 8967175 (-) |
| LOC113532851 | NA | coding | upstream | 77042 | 9796334 ~ 9819533 (-) |
| LOC113541360 | NA | coding | upstream | 565542 | 10284834 ~ 10284937 (-) |
| si:dkey-12l12.1 | NA | coding | upstream | 1256482 | 10975774 ~ 10980139 (-) |
| LOC113541107 | NA | coding | upstream | 1387122 | 11106414 ~ 11109555 (-) |
| prlh2 | prlh | coding | upstream | 1589462 | 11308754 ~ 11310736 (-) |
| G329722 | gnal,LOC107742053,LOC107702493 | non-coding | downstream | 95490 | 9621711 ~ 9622672 (-) |
| G329686 | NA | non-coding | downstream | 142467 | 9575384 ~ 9575695 (-) |
| G329531 | NA | non-coding | downstream | 368325 | 9349466 ~ 9349837 (-) |
| LOC117595799 | NA | non-coding | downstream | 636379 | 9057215 ~ 9081783 (-) |
| LOC117595798 | NA | non-coding | downstream | 667260 | 9049240 ~ 9050902 (-) |
| G329755 | NA | non-coding | upstream | 373 | 9719665 ~ 9723670 (-) |
| G329761 | NA | non-coding | upstream | 9576 | 9728868 ~ 9731870 (-) |
| G329762 | NA | non-coding | upstream | 13605 | 9732897 ~ 9733512 (-) |
| G329764 | NA | non-coding | upstream | 14901 | 9734193 ~ 9734740 (-) |
| G329765 | NA | non-coding | upstream | 16505 | 9735797 ~ 9736156 (-) |
| sec61b | sec61b,LOC102796100 | other | downstream | 2331815 | 7378731 ~ 7386347 (-) |
| G328342 | LOC108256401 | other | downstream | 2655734 | 7056794 ~ 7062428 (-) |
| arhgap33 | LOC108256528,LOC108438098,LOC106605587 | other | downstream | 3334574 | 6256403 ~ 6383588 (-) |
| zfpm2a | zfpm2,zfpm2a,LOC107714317,LOC107592441 | other | downstream | 3739783 | 5829474 ~ 5978379 (-) |
| ubr5 | ubr5 | other | downstream | 4740635 | 4932155 ~ 4977527 (-) |
| LOC113541109 | NA | other | upstream | 432205 | 10151497 ~ 10156800 (-) |
| G330185 | NA | other | upstream | 803440 | 10522732 ~ 10523263 (-) |
| ackr4b | ackr4 | other | upstream | 1203834 | 10923126 ~ 10930775 (-) |
| G330379 | NA | other | upstream | 1362976 | 11082268 ~ 11083151 (-) |
| cdv3 | cdv3 | other | upstream | 2224762 | 11944054 ~ 11996700 (-) |
