Gene
RNA
| Item | Value |
|---|---|
| gene id | G329997 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 10208739 ~ 10211577 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU390917 | True | 549 | lncRNA | 0.35 | 2 | 10208739 | 10211577 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113532851 | NA | coding | downstream | 389206 | 9796334 ~ 9819533 (-) |
| mppe1 | mppe1 | coding | downstream | 491173 | 9687555 ~ 9717566 (-) |
| elovl2 | elovl2,LOC101268971 | coding | downstream | 636534 | 9552595 ~ 9572205 (-) |
| gcm2 | gcm2,LOC107664656,LOC107707735,LOC107654664,LOC107552658 | coding | downstream | 698550 | 9504137 ~ 9510189 (-) |
| mak | mak | coding | downstream | 736327 | 9451374 ~ 9472412 (-) |
| LOC113541360 | NA | coding | upstream | 73257 | 10284834 ~ 10284937 (-) |
| si:dkey-12l12.1 | NA | coding | upstream | 764197 | 10975774 ~ 10980139 (-) |
| LOC113541107 | NA | coding | upstream | 894837 | 11106414 ~ 11109555 (-) |
| prlh2 | prlh | coding | upstream | 1097177 | 11308754 ~ 11310736 (-) |
| zfand1 | zfand1,LOC107739158,LOC107681457,LOC107554718 | coding | upstream | 1143595 | 11355172 ~ 11368763 (-) |
| LOC113541201 | NA | non-coding | downstream | 25908 | 10179208 ~ 10182831 (-) |
| G329952 | NA | non-coding | downstream | 42135 | 10166075 ~ 10166604 (-) |
| G329943 | NA | non-coding | downstream | 48756 | 10159767 ~ 10159983 (-) |
| G329941 | NA | non-coding | downstream | 52454 | 10155930 ~ 10156285 (-) |
| G329934 | NA | non-coding | downstream | 69782 | 10138703 ~ 10138957 (-) |
| G330030 | NA | non-coding | upstream | 106016 | 10317593 ~ 10319393 (-) |
| G330182 | NA | non-coding | upstream | 307288 | 10518865 ~ 10519397 (-) |
| G330132 | NA | non-coding | upstream | 419583 | 10631160 ~ 10639145 (-) |
| G330219 | NA | non-coding | upstream | 531854 | 10743431 ~ 10743993 (-) |
| G330229 | NA | non-coding | upstream | 548420 | 10759997 ~ 10760802 (-) |
| LOC113541109 | NA | other | downstream | 51939 | 10151497 ~ 10156800 (-) |
| sec61b | sec61b,LOC102796100 | other | downstream | 2822392 | 7378731 ~ 7386347 (-) |
| G328342 | LOC108256401 | other | downstream | 3146311 | 7056794 ~ 7062428 (-) |
| arhgap33 | LOC108256528,LOC108438098,LOC106605587 | other | downstream | 3825151 | 6256403 ~ 6383588 (-) |
| zfpm2a | zfpm2,zfpm2a,LOC107714317,LOC107592441 | other | downstream | 4230360 | 5829474 ~ 5978379 (-) |
| G330185 | NA | other | upstream | 311155 | 10522732 ~ 10523263 (-) |
| ackr4b | ackr4 | other | upstream | 711549 | 10923126 ~ 10930775 (-) |
| G330379 | NA | other | upstream | 870691 | 11082268 ~ 11083151 (-) |
| cdv3 | cdv3 | other | upstream | 1732477 | 11944054 ~ 11996700 (-) |
| LOC113541288 | NA | other | upstream | 2464968 | 12676545 ~ 12677938 (-) |
