G331476


Basic Information

Item Value
gene id G331476
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 13257894 ~ 13258416 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU392569
AATTGAAGTGACCTTAATATCGTTGTTTTTTGATGTAGAGGAAGTGATTAAAAATGGAGTGGTGGTGTTGTACCTTGATGCACGGCGACATTACAGCCGTGACCGTCGCAGTAAACCAGCGGGTTTTCGGCCCAGCCTCTCTCATCAGAGCAAACACAGCAACCTCCGATCATCTCCTTCATATTAGCGGCCAAGTAGTGGCTAAATACCAtctacaaacagaaacaaagtccCCAAACGTTTATATCGAGTCCTCGTCACGAATATCCAAGATCCATTTGGATGAAAAGTCCATATTTAATGTCGTCTCCTTCACATTAGCGTCCGAAGGAGTCGCAGGATCCCGTCAAgaaaaaggtggaaaaaaagacGCCCAAAACGACCTAAAAGCGCgatgtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU392569 True 400 TUCP 0.45 2 13257894 13258416

Neighbor

gene id symbol gene type direction distance location
cul1b cul1,LOC107686696,LOC107595130,LOC107727219,LOC107741709,LOC107695409 coding upstream 215378 13021167 ~ 13042516 (+)
LOC113541231 cntnap2,cntnap2a,LOC108256453,LOC108256478,LOC108256479 coding upstream 242785 12766560 ~ 13015109 (+)
ccl34b.4 LOC100304628 coding upstream 545243 12710626 ~ 12712651 (+)
LOC113541349 LOC108256200 coding upstream 549891 12706939 ~ 12708003 (+)
hs6st1b hs6st1b,LOC108256600,LOC108434959,LOC107558548,LOC107697682,LOC107677314,LOC107729660,LOC107590258,LOC106579591 coding upstream 758848 12428457 ~ 12499046 (+)
skida1 skida1 coding downstream 16244 13274660 ~ 13278025 (+)
armc3 armc3 coding downstream 63921 13322337 ~ 13334525 (+)
msrb2 msrb2,LOC107735060 coding downstream 77922 13336338 ~ 13341661 (+)
c8g NA coding downstream 85330 13343746 ~ 13350216 (+)
klhl15 klhl15,LOC107727232,LOC107695400,LOC107686713 coding downstream 115148 13373564 ~ 13379652 (+)
G331441 NA non-coding upstream 67939 13187836 ~ 13189955 (+)
G331349 NA non-coding upstream 192447 13064703 ~ 13065447 (+)
G331348 NA non-coding upstream 196235 13061335 ~ 13061659 (+)
G331345 NA non-coding upstream 200653 13056518 ~ 13057241 (+)
G331344 NA non-coding upstream 203375 13054285 ~ 13054519 (+)
LOC117595778 NA non-coding downstream 40 13258456 ~ 13260558 (+)
G331480 NA non-coding downstream 5933 13264349 ~ 13264586 (+)
G331482 NA non-coding downstream 11011 13269427 ~ 13269642 (+)
G331486 NA non-coding downstream 15327 13273743 ~ 13274041 (+)
G331487 NA non-coding downstream 15711 13274127 ~ 13274411 (+)
G331263 LOC108256200,LOC100304628 other upstream 545216 12706939 ~ 12712678 (+)
prkag2a prkag2,prkag2a,LOC108256599,LOC108434244,LOC106590432,LOC106579597,LOC107729655,LOC107590261,LOC107757712 other upstream 1101107 12062332 ~ 12156787 (+)
ankha ankh,ankha,LOC108256444,LOC108434238,LOC107724566 other upstream 1509335 11717415 ~ 11748559 (+)
acad11 acad11,LOC107715568,LOC104947469 other upstream 2273685 10874209 ~ 10984209 (+)
G330257 NA other upstream 2282979 10973264 ~ 10974915 (+)
stau2 stau2,LOC107691439 other downstream 1875937 15134353 ~ 15314968 (+)
si:ch73-173p19.2 LOC108256301 other downstream 1993219 15251635 ~ 15265895 (+)
G332636 NA other downstream 2307759 15566175 ~ 15566663 (+)
hhatlb hhatl,hhatlb,LOC108256744,LOC107585011,LOC107701661 other downstream 3841748 17100164 ~ 17110027 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other downstream 4026666 17285082 ~ 17302004 (+)

Expression


Co-expression Network