G332636


Basic Information

Item Value
gene id G332636
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 15566175 ~ 15566663 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU393912
gaaagccagagaaatggattctacaatccaccggctgagggtctgcttagaagcaggaaaacccctcttagggggaccaaagcaaacaagcaactggtccgcctttctccacagggcagttctgtggacgtacgcgtccagtgctcgcactggacacgtacaattgagcttccgatggtcgggctccctaaagggaggaggacagaaagcctgcagcatgaccggccgtggtgccgaggaggggactttcggtacgtaccccgctcgggggtacaagaatgctttggccaaaccaggcgcaaagtctaaataggaaggggccaccgagagggcctgaagatcccccactctcctaagagaggaaattgccaagagaaaggcagttttcaacgtcagaagacggtccgaaatctcctctatgggctcgaaggggggtttgcagagagcctctaaaaccacggccaggtcccacgaggggacccgagatcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393912 True 489 TUCP 0.57 1 15566175 15566663

Neighbor

gene id symbol gene type direction distance location
si:ch73-173p19.1 LOC108256550 coding upstream 168648 15382986 ~ 15397527 (+)
flj11011l ube2w,LOC103354920,LOC107725703,LOC106591739,LOC107754202 coding upstream 436572 15121226 ~ 15129603 (+)
trpa1b trpa1 coding upstream 455861 15084521 ~ 15110314 (+)
eya1 eya1,LOC107657823 coding upstream 718091 14796644 ~ 14848084 (+)
xkr9 xkr9 coding upstream 844598 14714795 ~ 14721577 (+)
tpk1 tpk1 coding downstream 20639 15587302 ~ 15614891 (+)
panx1a panx1 coding downstream 53485 15620148 ~ 15629965 (+)
hephl1a LOC108256642 coding downstream 510228 16076891 ~ 16096771 (+)
LOC113541322 NA coding downstream 633833 16200496 ~ 16219013 (+)
prex2 prex2,LOC107741010,LOC107686687,LOC107758281,LOC107695383 coding downstream 760322 16326985 ~ 16443144 (+)
LOC113541145 NA non-coding upstream 147252 15413872 ~ 15418923 (+)
G332527 NA non-coding upstream 233743 15328614 ~ 15332432 (+)
G332348 NA non-coding upstream 363870 15201817 ~ 15202305 (+)
G332334 NA non-coding upstream 452661 15065975 ~ 15113514 (+)
G332248 NA non-coding upstream 610108 14955860 ~ 14956067 (+)
LOC113541248 NA non-coding downstream 4200 15570863 ~ 15579798 (+)
G332650 NA non-coding downstream 25425 15592088 ~ 15617234 (+)
G332788 NA non-coding downstream 474721 16041384 ~ 16041587 (+)
G332790 LOC108272979,LOC108266882 non-coding downstream 535087 16101750 ~ 16102212 (+)
G332791 NA non-coding downstream 535608 16102271 ~ 16102597 (+)
stau2 stau2,LOC107691439 other upstream 251207 15134353 ~ 15314968 (+)
si:ch73-173p19.2 LOC108256301 other upstream 300280 15251635 ~ 15265895 (+)
G331476 NA other upstream 2307759 13257894 ~ 13258416 (+)
G331263 LOC108256200,LOC100304628 other upstream 2853497 12706939 ~ 12712678 (+)
prkag2a prkag2,prkag2a,LOC108256599,LOC108434244,LOC106590432,LOC106579597,LOC107729655,LOC107590261,LOC107757712 other upstream 3409388 12062332 ~ 12156787 (+)
hhatlb hhatl,hhatlb,LOC108256744,LOC107585011,LOC107701661 other downstream 1533501 17100164 ~ 17110027 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other downstream 1718419 17285082 ~ 17302004 (+)
rnf6 rnf6,LOC106590444 other downstream 1969281 17535944 ~ 17542387 (+)
pan3 pan3,LOC107705213 other downstream 2194868 17761531 ~ 17796521 (+)
G333943 LOC108256468 other downstream 2420099 17986762 ~ 17993014 (+)

Expression


Co-expression Network