G334211 (mybl1)


Basic Information

Item Value
gene id G334211
gene name mybl1
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 18440255 ~ 18440656 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU395831
GGTGAGAACGGAAGTCCTTTAACTGGCGTGCTTTTCATTGAGCTCCTAGTGTTGTCTGTAAAAGAGCCGCAGTTTGCATCGTCACTAAGCGACTggtctgctctctctctcgtcttcTTCCTCGGCAGGGACAGCGGAGGGGAGTTGAATTTGCCCACAGTGGGAGTGTTATGAGGCACGGGTTTCCCCTGGCTCATTCCAATGCGGGGTCTGCACAAAGCAGGGGCAGGAGTGTGGTACCCAACATCCTCTGTGCCGTCATCTTGAGCTGGGTACGCGCCATCAAGGACGGGGGGTTTAGGAGGACTGACAGACTCAGATAGGTCAAAACTTCCCACCTCACTCCAGACCATAGGATCCTGCAGAGCAAGACACACTTTCTGTTCACATTTTAAGGTTCAC

Function

symbol description
mybl1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in mitotic cell cycle and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in blood. Orthologous to human MYBL1 (MYB proto-oncogene like 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395831 True 402 lncRNA 0.53 1 18440255 18440656

Neighbor

gene id symbol gene type direction distance location
si:dkey-97a13.12 NA coding upstream 8105 18396227 ~ 18432150 (+)
rrs1 rrs1,LOC107590198,LOC107721889 coding upstream 16695 18420986 ~ 18423560 (+)
trim55b trim55,LOC107590338,LOC107663638 coding upstream 49390 18380291 ~ 18390865 (+)
trnaa-agc_16 NA coding upstream 60241 18379942 ~ 18380014 (+)
trnaa-agc_15 NA coding upstream 60881 18379302 ~ 18379374 (+)
sgk3 sgk3,LOC107721888,LOC107663688,LOC107666631,LOC107705243,LOC107590197 coding downstream 12451 18453107 ~ 18467245 (+)
pign pign,LOC107663715,LOC107721925,LOC107666639,LOC107705240 coding downstream 63162 18503818 ~ 18523294 (+)
LOC113541230 NA coding downstream 82498 18523154 ~ 18527695 (+)
hnf4g hnf4g,LOC107586790,LOC107666612 coding downstream 89819 18530475 ~ 18542760 (+)
zfhx4 zfhx4,LOC107666618,LOC107721891,LOC107705239,LOC107590192 coding downstream 292304 18732960 ~ 18788585 (+)
G334210 NA non-coding upstream 809 18439149 ~ 18439446 (+)
G334209 NA non-coding upstream 2849 18435721 ~ 18437406 (+)
G334120 NA non-coding upstream 115370 18296643 ~ 18324885 (+)
G334077 NA non-coding upstream 236575 18203063 ~ 18203680 (+)
G334078 NA non-coding upstream 237350 18200395 ~ 18202905 (+)
G334219 NA non-coding downstream 60127 18500783 ~ 18530907 (+)
LOC113541128 NA non-coding downstream 102706 18543362 ~ 18681823 (+)
G334345 NA non-coding downstream 238219 18678875 ~ 18738178 (+)
G334371 NA non-coding downstream 248103 18688759 ~ 18726730 (+)
LOC117595807 NA non-coding downstream 264636 18705292 ~ 18706093 (+)
mtfr1 mtfr1 other upstream 116960 18315354 ~ 18323295 (+)
G333943 LOC108256468 other upstream 447241 17986762 ~ 17993014 (+)
pan3 pan3,LOC107705213 other upstream 643734 17761531 ~ 17796521 (+)
rnf6 rnf6,LOC106590444 other upstream 897868 17535944 ~ 17542387 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other upstream 1138251 17285082 ~ 17302004 (+)
mcmdc2 mcmdc2 other downstream 27222 18467878 ~ 18486009 (+)
G334373 NA other downstream 252493 18693149 ~ 18717953 (+)
LOC117595806 zfhx4,LOC107590192 other downstream 271392 18712048 ~ 18747477 (+)
dap dap,LOC107705232,LOC107701690,LOC107654217 other downstream 877201 19317857 ~ 19427936 (+)
G334838 NA other downstream 1135455 19576111 ~ 19577073 (+)

Expression


Co-expression Network