G335868


Basic Information

Item Value
gene id G335868
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 21016946 ~ 21018572 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU397730
GAGcagcagtgtgacagtgtgagggagcagcagtgtgacagtgtgaggGAGCAGCAGTGTGACATtgtgagggagcagcagtgtgacagtgtgaggGAGCggcagtgtgacagtgtgagggagcgacagtgtgacagtgtgaaaaAGCAACAGCATGGTGGAGCCACAGCGTGTCACTGAGCGATAGTGTGACAGCGTGACAGGGCAATGAGGCAACAGTTTGACAGAGTGATGGGACAACTGAGCGACAGGGACAAAGTGTGATGGGACAAAAGCGTGACAAGGCAACAAGGTGAAAGTGTGACAGGGAGAAAGCATGACTTGGTGAAAGTTTACACTCACTCTTCCATTCAGGCTGCTGTTCAGTTTCATCAGAGGAGCTTTAATCTCATCAGGGAGCTTTGCCAGaatcttcatcctcatctaGAAATCAGGGAAATACAGACGGCAGATGTAGCAGTACAGAATCACACAGTAACAGCAAATAGCCGCAGATGAAGTAGATAAATTacattttggatattttttggattattaaaactttttaaaatgttgcacTCTCCACAGACAGAAAAGCTAAAAGAAGGAGCAGTAACTGGTTTTAATCACATGTCAATCATATTAATGTTGAGAACAGAAGACAATTACACATGACCCCAACAGTACTGTTCTCACAGCAATGGCAGCTCCATCTCCTAAATTCCAATTTAACCTCATTCACCCTGTAACCATGGAAATAGCATTGCTGACCTCAGCAGTGATGGGGTTGGTATTGTCCATGGTGATCTTGTGATCATCTGACAAGAAGCTGATCATCGCATTGGTTAGATCAGAACAGACTGATTTCAGGATGTGTTTCACCATGTGGAGTTGAACatcatctgcacacacacatacacacacctgagtaaTGTTTGGGTCCCTGTTCTGGTACATGAACATTTTTGTACctcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397730 True 955 lncRNA 0.45 2 21016946 21018572

Neighbor

gene id symbol gene type direction distance location
LOC117595766 NA coding downstream 3512 21011498 ~ 21013434 (-)
zmynd11 zmynd11 coding downstream 276067 20726533 ~ 20740879 (-)
pld1b pld1b,LOC108256388,LOC108413108,LOC107663701,LOC107685440,LOC107586751,LOC107721916 coding downstream 528802 20445239 ~ 20488144 (-)
tnikb tnik,tnikb,LOC103024681,LOC107685441,LOC106578374,LOC108440401,LOC107721871,LOC107725857,LOC103377179 coding downstream 579115 20376679 ~ 20437831 (-)
eif5a eif5a2,eif5a,LOC107590245,LOC107685442,LOC107586748 coding downstream 641897 20369151 ~ 20375049 (-)
G335859 NA non-coding downstream 14835 20922907 ~ 21002111 (-)
G335831 NA non-coding downstream 271930 20744559 ~ 20745016 (-)
G335800 NA non-coding downstream 355117 20660628 ~ 20661829 (-)
G335498 NA non-coding downstream 822565 20121516 ~ 20194381 (-)
LOC113541188 NA non-coding downstream 844022 20167317 ~ 20172924 (-)
G335865 NA non-coding upstream 4385 21022957 ~ 21024079 (-)
G335867 NA non-coding upstream 5769 21024341 ~ 21024574 (-)
G335788 larp4b other downstream 404637 20610232 ~ 20612309 (-)
stag1b stag1,stag1b,LOC108434968,LOC107590250 other downstream 425330 20560090 ~ 20591616 (-)
fndc3bb fndc3b,fndc3bb,LOC108434945 other downstream 458987 20497088 ~ 20557959 (-)
otos otos,LOC108440409 other downstream 768485 20246451 ~ 20248461 (-)
cops9 NA other downstream 770635 20242488 ~ 20246311 (-)

Expression


Co-expression Network