Gene
RNA
| Item | Value |
|---|---|
| gene id | vipr2 |
| gene name | vipr2,LOC107656837 |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 20744749 ~ 20764373 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| symbol | description |
|---|---|
| vipr2 | Predicted to enable G protein-coupled peptide receptor activity; peptide hormone binding activity; and vasoactive intestinal polypeptide receptor activity. Acts upstream of or within adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including eye; gut; heart; integument; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in schizophrenia 16. Orthologous to human VIPR2 (vasoactive intestinal peptide receptor 2). |
| description |
|---|
| PREDICTED: vasoactive intestinal polypeptide receptor 2-like |
| id | name | namespace |
|---|---|---|
| GO:0007188 | adenylate cyclase-modulating G protein-coupled receptor signaling pathway | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004999 | vasoactive intestinal polypeptide receptor activity | molecular_function |
| id | description |
|---|---|
| K04590 | VIPR2; vasoactive intestinal peptide receptor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026912067.2 | False | 1820 | mRNA | 0.47 | 14 | 20744749 | 20764373 |
| XR_003402672.2 | True | 2240 | misc_RNA | 0.46 | 15 | 20744749 | 20764373 |
| XR_003402673.2 | False | 1950 | misc_RNA | 0.47 | 15 | 20744749 | 20764373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dip2ca | dip2c,LOC108261172 | coding | upstream | 18644 | 20617744 ~ 20726105 (+) |
| larp4b | larp4b | coding | upstream | 132427 | 20592686 ~ 20612322 (+) |
| LOC117595765 | NA | coding | upstream | 163204 | 20580580 ~ 20581545 (+) |
| LOC117595803 | ghsr,LOC107685461,LOC107586810,LOC107725860,LOC107721864 | coding | upstream | 248403 | 20493332 ~ 20496346 (+) |
| cldn11b | cldn11 | coding | upstream | 404965 | 20334612 ~ 20339784 (+) |
| LOC113525236 | ufl1 | coding | downstream | 246499 | 21010872 ~ 21024050 (+) |
| G335706 | NA | non-coding | upstream | 121598 | 20619515 ~ 20623151 (+) |
| G335705 | NA | non-coding | upstream | 130125 | 20614394 ~ 20614624 (+) |
| G335689 | stag1,stag1b,LOC108434968,LOC107721913,LOC107590250 | non-coding | upstream | 179005 | 20564650 ~ 20565744 (+) |
| G335681 | NA | non-coding | upstream | 214541 | 20529746 ~ 20530208 (+) |
| G335619 | NA | non-coding | upstream | 319446 | 20424212 ~ 20425303 (+) |
| G335845 | NA | non-coding | downstream | 15811 | 20780184 ~ 20780551 (+) |
| G335846 | NA | non-coding | downstream | 30098 | 20794471 ~ 20893384 (+) |
| G335847 | NA | non-coding | downstream | 121497 | 20885870 ~ 20886149 (+) |
| G335856 | NA | non-coding | downstream | 143860 | 20908233 ~ 20908467 (+) |
| lrrc34 | lrrc34 | other | upstream | 463497 | 20274120 ~ 20281252 (+) |
| mynn | mynn | other | upstream | 474184 | 20261868 ~ 20270565 (+) |
| ccl20b | NA | other | upstream | 581643 | 20160267 ~ 20163106 (+) |
| camk2n2 | camk2n2,LOC108256106,LOC107590228,LOC108443638,LOC103024774,LOC107586800 | other | upstream | 756713 | 19985332 ~ 19988036 (+) |
| smpx | smpx,LOC107590224,LOC107663668,LOC107721880,LOC107705278,LOC107671350 | other | upstream | 861913 | 19870381 ~ 19882836 (+) |
