ethe1 (ethe1,LOC106582613,LOC106605166)



Basic Information


Item Value
gene id ethe1
gene name ethe1,LOC106582613,LOC106605166
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 108218 ~ 115146 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>XM_026912119.2
acgcccacacacacacacacgcatacatacatacacacacacacgcatacacacacacacacatacacacacacacacacacgcagtgttGCTCAGAGCAGCAGGCTGGTCCGGTGGTGTAACGCAGTGTAACGTGTTGAGCgggtgtgttgggtgtgttggGGTGATGGCTTTAtcagtgaggagtgtgaggtCTCTGCTCGCAGTCCGGAGTGTGATCTCCCGGAAGTGTTCACTCGGAGTGCACACAGGAGTGAGAGTGATGGACAGCAATAAGGGTCTCCTGTTCCGCCAGcTGTTTGAGTCCTCCAGCAGTACCTACACATACCTGCTGGCAGACGTGAGTTCTCGGGAGGCCGTGCTGATTGACCCGGTTCTGGAGACGGTAGATCGGGACGTGAAGCTGATTGAGGAGCTCGGGCTTAAACTGACTGTGGCAGCGAACACACACTGCCATGCGGATCATGTGACAGGAACTGGACTGCTGAAGAAGCGCATATTCGGGGTGAAGAGCGCGATATCAAAACACAGTGGAGCGCGTGCCGACATCCTGCTGTCAGAAGGAGACAGCATTACTTTCGGAAAATACtgtgtgacggTGAGAGAGACTCCAGGACACACAGATGGGTGTGTGACGTTTGTGACAGGAGACGATTCGATGGCCTTCACTGGAGATGCACTGCTGATCAGAGGCTGCGGGAGAACCGACTTCCAACAAgGCTGTGCCAAGAAACTGTACCAGTCTATCCATGAGAAGATCTTCACTTTACCGGGACACTGTCTGGTTTATCCTGCACACGActacaaaggacAGACTGTGTCcacagtggaggaggagagaaagttTAACCCGAGATTAACTCGCTCGCAGGAGGAGTTTGTGGAAATCATGAACAATCTGAATCTCCCGAAACCGGCCAAGATTGATGTGGCCGTTCCTGCTAACCTGGTGTGCGGTCTTCATGATGTTTGAGGAGGAAATATATTTGAATTACTTTAACGTTTGGAAAACAgacaaatgtcattttattagaTACAGATATTAGattaatgtacacacactcactctctctctcacacactggcTCATACAGTGTCTtctattaaagaaaatgtttcttCTA

Function


symbol description
ethe1 Predicted to enable sulfur dioxygenase activity. Predicted to be involved in glutathione metabolic process and hydrogen sulfide metabolic process. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in ethylmalonic encephalopathy. Orthologous to human ETHE1 (ETHE1 persulfide dioxygenase).

NR:

description
PREDICTED: persulfide dioxygenase ETHE1, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K17725 ETHE1; sulfur dioxygenase

RNA


RNA id representative length rna type GC content exon number start site end site
XM_026912119.2 True 1124 mRNA 0.50 7 108218 115146

Neighbor


gene id symbol gene type direction distance location
LOC113525556 LOC108278024 coding upstream 420 96799 ~ 107798 (+)
xrcc1 xrcc1,LOC107565304,LOC107737754 coding upstream 12490 77198 ~ 95728 (+)
LOC113525566 LOC108278025 coding upstream 40219 63577 ~ 67999 (+)
ggctb NA coding upstream 93646 5556 ~ 14572 (+)
zgc:114181 LOC108261199 coding downstream 107371 222517 ~ 231494 (+)
dpy19l1l dpy19l1 coding downstream 218538 333684 ~ 350549 (+)
LOC117595771 NA coding downstream 340370 455516 ~ 456979 (+)
LOC113524801 NA coding downstream 345067 460213 ~ 466623 (+)
ppox ppox coding downstream 354810 469956 ~ 483298 (+)
G324041 NA non-coding upstream 15370 91952 ~ 92848 (+)
G324026 NA non-coding upstream 49666 57345 ~ 58552 (+)
G324042 NA non-coding downstream 1268 116414 ~ 120887 (+)
G324039 LOC108256235 non-coding downstream 1821 116967 ~ 150990 (+)
G324045 NA non-coding downstream 21955 137101 ~ 138861 (+)
G324060 NA non-coding downstream 103686 218832 ~ 219099 (+)
LOC113523709 NA non-coding downstream 118468 233614 ~ 234831 (+)
nod1 nod1 other upstream 72446 25296 ~ 35772 (+)
G324020 NA other upstream 85008 22297 ~ 23210 (+)
cmc1 cmc1 other downstream 67321 182467 ~ 193845 (+)
tbx20 tbx20,LOC107600539,LOC107719124,LOC107592953,LOC107666841 other downstream 125224 240370 ~ 327939 (+)
G324068 NA other downstream 126051 241197 ~ 292588 (+)
G324067 NA other downstream 239635 354781 ~ 412109 (+)
G324085 NA other downstream 323245 438391 ~ 442287 (+)

Expression



Co-expression Network