tmem145 (tmem145,LOC107706472,LOC107593664,LOC107723540,LOC107657707)


Basic Information

Item Value
gene id tmem145
gene name tmem145,LOC107706472,LOC107593664,LOC107723540,LOC107657707
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 7587193 ~ 7614945 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923940.2
GCGCGTCCTTGTTTCCGGGAGCGCGGACGCGTGCATGAGCAGAGGGGTGTCGGGAGCGCGCATTGTGGCTCTGTGAACTGCAGCTCTTCGTCTCGTGCATAAGCTTTCCTGCGCACTCCTGTACTAGGAACTGAGCAAGGATAGAAAAAAATGGATAGAGTTCTGGGACTTGCCATTGTGTGGAGTATCTTGTGCGATGGATCTGTGTGGGGGAAATACGTCAAGGGTGTCGTGAACACCAAAGAGGACTGGGTGTTTCTGACGAGGTTTTGTTTCCTCACTGATTTTGGCAGACTGGACTTCAAGTTCCGTTACCCAAAGTCACGCTGCTGTCAGAACATATTGCTGTACTTTGATGAAAGCTCGCAGTGGCCAGCTGTATACAAGAGGCCAGACAAGGACTGTTATCAGAAAGAGGCAGTCCTGAGGCCAGAAAACAACCAAGTCATTAACCTTACCACCCGATACACCTGGTCTGGATGTGTGGTTGAagaagaggatgatgaagaaGTCCTCAGCTGTGTCGGAGGGCGTAGCTTTCGTTCAGTCAGAGAGAGATGGTGGTATATTGTGCTCAGCAAGTGTGGGggcgGAGGGTTACAGCTGGAGTATGAGATGAAGCTAACTAATGGCCAGTCTTTCTGGAAACAACATTTTTCTGCAGACGAGTTTGGAATTCTGGAAACAGACATCACCTTCTTGGTTATATTTGCCAGtgtattttctctctcctgctaTTTTGCATATAACCTGAAAGGAAGGCAGCTACTCCATACCACATATAAGATGTTTATGACTGCAGCTGGAGTCGAGGTTCTCAGTTTGCTCTTCTTTTGTATCTATTGGGGCCTGTATGCCAGAGATGGAGTTGGAAATGGGTGTCTAAAGATACTCGGAAAATTACTCTTCTCTGTTAGTTTCCTGATCTTCCTCCTGATGCTGATTCTCTTGGGGAAAGGCTTCACTGTCACAAGAGCAAGAATAAGTCACAGTGGCTCTATCAAGCTATCTATCTACATGACCATCTATACAATTACCTACATCATCCTCTTCATATATGAAGCTGAGTTTTTTGACCCAGGTGAAGTACTATATGCTTATGACAGTCCCGCTGGATATGGGCTGATGGGCCTCCAGCTGCTGGCATATGTGTGGTTCTGCTATGCTGTGCTGGTGTCTCTTAAGCATTACCCAGAGAAACAGCCATTCTACATCCCTTTCTTTGCTGCATACACTCTCTgGTTTTTCGCTGTACCAGTCATGGCTCTTATTGCGAACTTTGGCATATCTCGATGGGCCCGGGAGAAGATTGTCAATGGTATTCAGCTCGGCATCCACCTCTATGCCCACACTGTCTTTTTAATCATCACACGTCCATCAGCAGCTAATAAGAATTTCCCTTATCATGTGCGAACATCACAAATTGGTATACTACTGTCGAGCCCTAAAGAGATGGGGGCAGAAAGTTTCCCTCATCATGCGTACGGGAACAGCACCTTCTTGGGAGACTCTCAGCCTAACTTCACTGAACTCTTCTCCATCCAGTCAGTCTCtgtgaaaaatataaatgaggCCATGGGATGGAAGGGACAAGATATGGCTTTGAACACTGAGCAAAAGATCATCACCACATCATCCCCGGTCGACTTTTCAACAACATTTACTTCTGCTATGCCAACGACCAGCTctgctctctcacctcctccaAGGCTATCCTCTCATTTTACTGAATATTTCAGCATGCAGGGCAGAACAGTCTCTCAAGCGTAGTGAAGTAGACTTAGGTCTTTGGGATCATCCCAAAGTCAGCTTTGCAGTGATTTGGGGAAAAACAGAATATTACATTTGACTTTCTGCAAAGAGGATGCGCACCATGATTTGCAGAAGAGCTATTAGGAGGAGATATGAAGTgctaaataaaaagcaataaatatttCAGCCAGATTAAGGTGACTCCTGAGAGGACATTTTGGTTGTACATAGCACAGTATAATACGAATGTAAGATATTCAGTATGCAGAGTTTTAAGATACAGAtattttatgtgtaaatgtatagAAGTGTAAGATTTTTTAAgtgtaaaaagttttttttttgtttacatacatattttccAAGTGGTGCtgttaatatttgcattttcatgCCATTTTGTTTGAACTGAAATGGAGTATTCAGTACTCCAAAGGCAACAATTCATTGAATAATCtcatgtttcagtgtgtttgttgtaCATTATAGACACTAAATGGATCTTTTATGAAAAATTGCCTACATGGGATTAACATAGGTAATAAGAACTTCTTAGAAAGGGGAAGAAATACATTCTCTAGTTCAATACCTGCAATAATTGCCTTTAGTATTTTTAATGCATGTTGCTTATAAACTACAGTAAATCCtaaattcattttagttttgCTTTGGTGCACCAGGAGCAAGTTGCTCTGCCTTGTCTACTATTAGTTCAAATCCTTAGGCAAGAAATGGCAAActaggaataataaaaacaatctaGGCACATCATTATGAAGGCAGTttaaaagtattaattaattcagtaTTTTAATAGGGTACAGTAAATTTGTGGatgtccattttttttgccttctgtAATAGAAGTTATATTTACTGCATGTCAGACAATTCAAAACACGGTTATTGGTGAAGTTATTTGGCATAGTCAAGTAACTCTCCTTTAACTGAGACTATGGCACATTTTATGTTTCACagcagattttaataaaaaaaattatttatgta

Function

symbol description
tmem145 Predicted to act upstream of or within G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM145 (transmembrane protein 145).

NR:

description
PREDICTED: transmembrane protein 145

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0019236 response to pheromone biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923940.2 True 2760 mRNA 0.41 15 7587193 7614945

Neighbor

gene id symbol gene type direction distance location
galnt1 galnt1,LOC107657719,LOC107723435 coding downstream 18587 7453874 ~ 7568606 (-)
nr4a3 nr4a3 coding downstream 277181 7279561 ~ 7310012 (-)
stx17 stx17 coding downstream 318386 7248388 ~ 7268807 (-)
invs invs,LOC107596027,LOC107706121 coding downstream 363345 7185077 ~ 7223848 (-)
LOC113532705 LOC108256546,LOC100304805 coding downstream 432619 7141490 ~ 7154574 (-)
lipeb lipe coding upstream 5756 7620701 ~ 7646843 (-)
cd79a NA coding upstream 34646 7649591 ~ 7656996 (-)
arhgef1b arhgef1 coding upstream 44233 7659178 ~ 7702791 (-)
erfl1 LOC108256284,LOC108431014,LOC103032681,LOC107596612,LOC107706551,LOC107699460 coding upstream 96571 7711516 ~ 7762163 (-)
LOC113532988 LOC108256699 coding upstream 211062 7826007 ~ 7832633 (-)
G328586 NA non-coding downstream 22001 7561326 ~ 7565192 (-)
G328589 NA non-coding downstream 28230 7558684 ~ 7558963 (-)
G328588 NA non-coding downstream 28544 7558395 ~ 7558649 (-)
G328580 NA non-coding downstream 78086 7508869 ~ 7509107 (-)
G328562 NA non-coding downstream 135076 7450397 ~ 7452117 (-)
LOC113533080 NA non-coding upstream 165095 7780040 ~ 7799385 (-)
G328798 NA non-coding upstream 288697 7903642 ~ 7903887 (-)
G328864 NA non-coding upstream 430038 8044983 ~ 8045597 (-)
G328908 NA non-coding upstream 518738 8133683 ~ 8133887 (-)
G328942 NA non-coding upstream 597811 8212756 ~ 8215254 (-)
sec61b sec61b,LOC102796100 other downstream 200846 7378731 ~ 7386347 (-)
G328342 LOC108256401 other downstream 524765 7056794 ~ 7062428 (-)
arhgap33 LOC108256528,LOC108438098,LOC106605587 other downstream 1203605 6256403 ~ 6383588 (-)
zfpm2a zfpm2,zfpm2a,LOC107714317,LOC107592441 other downstream 1608814 5829474 ~ 5978379 (-)
ubr5 ubr5 other downstream 2609666 4932155 ~ 4977527 (-)
LOC113541109 NA other upstream 2536552 10151497 ~ 10156800 (-)
G330185 NA other upstream 2907787 10522732 ~ 10523263 (-)
ackr4b ackr4 other upstream 3308181 10923126 ~ 10930775 (-)
G330379 NA other upstream 3467323 11082268 ~ 11083151 (-)
cdv3 cdv3 other upstream 4329109 11944054 ~ 11996700 (-)

Expression


Co-expression Network