tmem147 (tmem147,LOC106605633,LOC107666831)


Basic Information

Item Value
gene id tmem147
gene name tmem147,LOC106605633,LOC107666831
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 5144970 ~ 5150227 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026924041.2
TAGGCAAATCCGGAACTCTtgtttgtgctgtgttgttGAAGTCCGGAATCTTTTCAATGAGAAACCCGTCTCTACTAGAAGACATTTCATTAAGAAACCTCAGCGGTCATTCGGTCCAGGAGGTGtatctttcttttattatttcttcttgAGAAATGACGCTTTTTCATTTCGGGAACTGTTTTGCCCTGGCTTATTTTCCATACTTCATAACATACAAATGCAGTGGATTATCAGAATACAATGCATTCTGGAGATGTGTCCAAGCAGGGGCCACTTACCTCTTTGTACAACTATGCAAAATGCTGTTCCTTGCTACATTTTTTCCTACCTGGGAAGGTGGTGCTGGTGTATATGACTTTGTCGGGGAATTTATGAAGGCCACAGTGGACATGGCAGATCTGCTAGGGCTTCACCTTGTCATGTCCAGAAACGCTGGGAAGGGAGAATACAAAATAATGGTAGCTGCCATGGGCTGGGCCACAGCTGAACTGGTTATGTCAAGGTGTATTCCTTTATGGGTCGGGGCTCGAGGGATTGAGTTTGATTGGAAATACATCCAAATGAGCTTCGATTCCAACATCAGTTTGGTTCACTACATCGCCATGGCTGCAGTAGTGTGGATGTTCACGCGGTACGACCTGCCGAAAAGTTTCCGCTTGCCAGTGACTGTGCTGTTGGGGCTCTGTGTGTACAAGGCATTTTTAATGGAGTTGTTTGTTCATGTGTTTCTCCTGGGCAGCTGGACGGCTCTGTTGGTGAAAGCGGTGTTAACAGGTGCCATCTCCCTCTGCTCGCTCTTCCTTTTCATCACACTGGTTCACAGCAACTGAGGCTTTTCTTATGTTGCCACACATTCAAGTGTTTTGTAAGAAAACTCCATATTAAGTGTTTTGTCTGTCAATGGGGCCAGTgagatgatgtcagtgatgtccgttgtattttttatttgtctttataatgaattaaaatatacaaaaataacccAA

Function

symbol description
tmem147 Predicted to be located in endoplasmic reticulum membrane and plasma membrane. Orthologous to human TMEM147 (transmembrane protein 147).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026924041.2 True 989 mRNA 0.44 8 5144970 5150227

Neighbor

gene id symbol gene type direction distance location
nkd2b nkd2 coding upstream 4163 5111073 ~ 5140807 (+)
trip13 trip13,LOC107754445,LOC107677654,LOC107659068,LOC107729803,LOC107736543 coding upstream 39548 5097141 ~ 5105422 (+)
cep72 cep72 coding upstream 88303 5046966 ~ 5056667 (+)
atp6v1c1a atp6v1c1,atp6v1c1a,LOC104937165,LOC102207943,LOC102305030,LOC100703061 coding upstream 125873 5008544 ~ 5019097 (+)
myom3 myom3 coding upstream 226501 4864569 ~ 4918469 (+)
ncam3 NA coding downstream 39791 5190018 ~ 5203404 (+)
LOC113532508 LOC108256086 coding downstream 78350 5228577 ~ 5234049 (+)
LOC113532857 NA coding downstream 85992 5236219 ~ 5240172 (+)
LOC113532629 LOC108256652,LOC108256651 coding downstream 90908 5241135 ~ 5248144 (+)
LOC113532776 LOC108256651 coding downstream 98683 5248910 ~ 5254552 (+)
G326462 LOC108256729,LOC108426375 non-coding upstream 115180 5019782 ~ 5029790 (+)
G326458 NA non-coding upstream 161290 4983473 ~ 4983680 (+)
G326440 NA non-coding upstream 220334 4924178 ~ 4924636 (+)
G326429 NA non-coding upstream 340911 4803837 ~ 4804059 (+)
LOC113532560 NA non-coding upstream 341459 4800572 ~ 4803511 (+)
G327071 NA non-coding downstream 391131 5541358 ~ 5541889 (+)
G327178 NA non-coding downstream 455643 5605870 ~ 5607099 (+)
G327385 zfpm2 non-coding downstream 682766 5832993 ~ 5833262 (+)
G327391 NA non-coding downstream 691992 5842219 ~ 5842438 (+)
G328024 NA non-coding downstream 1498053 6648280 ~ 6708779 (+)
klf10 LOC108256604 other upstream 155654 4984415 ~ 4989316 (+)
srsf10a LOC108256391,LOC108426370,LOC101486875 other upstream 214815 4924781 ~ 4930155 (+)
fabp10a LOC108256542,LOC107677662,LOC103026354,LOC106582922 other upstream 221289 4920980 ~ 4923681 (+)
LOC113532991 LOC108256125 other upstream 710719 4398659 ~ 4434251 (+)
hmgn2 NA other upstream 750186 4391520 ~ 4394784 (+)
acbd7 acbd7,LOC108256514 other downstream 160982 5311209 ~ 5314614 (+)
G326997 NA other downstream 182041 5332268 ~ 5338251 (+)
erp44 erp44,LOC107593692,LOC107723539,LOC107706132,LOC107596038 other downstream 2073795 7224022 ~ 7247279 (+)
LOC113532663 NA other downstream 2751288 7901515 ~ 7902608 (+)
osr2 osr2,LOC106591507 other downstream 3222458 8372685 ~ 8378896 (+)

Expression


Co-expression Network