iglon5 (iglon5,zgc:110372,LOC107707642,LOC107671460,LOC107733024,LOC106582734)


Basic Information

Item Value
gene id iglon5
gene name iglon5,zgc:110372,LOC107707642,LOC107671460,LOC107733024,LOC106582734
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 4070056 ~ 4206519 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026924409.2
CGGGCTCCGCTCTAGACTCTGCCTCGCGCTAACTATGCGCGTAGTGTCGCGCTGATCCGCTCGCTCGCGCCGCATTCCGAGAGAGAATCCGGAGGGGGAGATACACCAGTGAGAGCGCGCGCTCTGTGATAAGCCCTTCTTTTTCACTTCATCACTTCGTCTGGTCCTCTCAGGCGCGTGCGGGGATGCTCTTTGCGTGAGGGATATTTGCGTGCCTGTCGGTCGCTTCTTTCTTGAGGGGTCACTTTGGAGCAAGGAGGAGAGGGAAAAGGCacgaggaggagaaaaaaaaacccctcgCATCTAAGACATTTTTGGAGCATCTGTAGTAAACAAGAGCAGAGGAGGAGCGCGTGCGGTGCGCTCTATgcgttgtctctctctctttcaaagaaaaaaaacaaacaaacataaggACAACCTGCTGAATTGCATCACGGTGCTCGAGGAGAGATACAGCGATTGAAACTCGTAAACATGAGCCGCGCGATCTCAATCTTCACCGCTTTGCTGCTGGCGCTGCTGCCTGAAGGACCCAGCAGTGTCCAAGCGGTGGAGTTCAGTTTTTTCCCTGACAATATTACAGTGCTGGAAGGGCAGAGCGTCATTCTGAGGTGTAAGATTGACGAGGAGGTGACCCACAAGGCCTGGCTGAACCGCTCCAACATCCTGTTCACAGGGAACGAGAAGTGGTCTCTGGACCCACGGGTGTCAATGGCCAACAACAACGACAGCGACTTCTCCATCCAGATCGAGCGGGTGGCCGTGGCCGACGAGGGTCCGTACACGTGCAGCTTTCAGGCGCGAACCAAGCCACGCACTTCCCACGTCTACCTCATCGTCCAAGTGCCAGCGAGGATAGTCAACATCTCTCAGGATAAATCGGTCAACGAGGGCGATGACGTGAACCTCTTTTGCCTGGCGATTGGCCGGCCCGAGCCCACCATCACCTGGAAGGACATAAAATCTGGACGCACATACGAGGGAGAATTTCTGGACATCACAGAGATCAAACGGCATCAAGCCGAAGAGTTTGTGTGCATCACGAACAATGGTGTGGCGCCGCCGGATACACACCGCGTCAAGGTCACAGTGAATTATCCACCCATGATCACAGATGTAAAGAATATGCCAGCTCAAGTGGGGAAGACGGCCATCTTGCGCTGTGAGGCCATGGCTGTCCCCACTGCATCTTTCGAGTGGTACAGGGACGACCGGAGACTGGTGGAGAGCGACAACACGCTGCGGATTAAAAATGAGAAGACACGTTCCCTGCTGCTCTTCACCAACGTCACCGAGAAACACTTTGGCAACTACACCTGCTTCGCCTCCAACCGCCTAGGGGCCTCCAATGCCAGCATGCTTCTCTTCAGGCCGGGGGCAGTCTATGGCGGAAGCGTGTCGCTAAGCGCCTGCCTATCGGGACTCGTCTTCTGGCTCAGCCTCTCCATCTCCGTCCTGCTGAAGGTCTAACACGTTGCCGCCTCGGAAAAGGAGTCTTTAAATGACGAACCCAtcactgtgaataaaaaaagaattatgcATTAACCCAGGAGCCATCTCTTGCATCTTATAATCACCACCCTCCCCTCTCCCCACTCATGTCATTCCCACCCGTCATTGGCAACCACTGGCCACTGCCTTTCCCGCTTCTCCAGTGAAGGTCACCTTTTCAATGTTCATAGCTGTTGTGGTgatgattataaaaaaaaatatgaatgctAAAAATGTGAAGGTGCCGAGCGGAGCGTGTTTTTGTCTCAGTGTGCACGTGCTGGATCATGGTTGTATATTTGTGAATGGTGTCACATTAATGGTGTTTATGAGGAATGtgatatgatatatatgatgatgatgatgatgatggtcaggtgacccTGTAAACAAGCTGTGGCTGTTCACCAGCAGGCCACGCCTCAGTGGCCTTCGCTCTCTCGGATCTGAGCAGCAGAATTTTTCTGTGAATGATGTCAAATCTCATCTGCGCTAAGGGTCAACATTAGCATGGGGGGAGGGGAAAACTTATTTGTCCCCCCTCTTTTTGCATTTGCTGGAGGTCTTGACCCAGGGCAAAGCATGTGACCCCAGTCCGGCCTTCCAGTCTTTCCTCGGTCTCATCGCATTACCACATTACTACCTTCACCCtcagtgtaaatatatatgcagTAGAGGCCACCCCATAATTCCATATTCACCATCCGATTTACGGAatacatttcccatcagcctcTCTGTTTCAGGCTTTTTTGGCTTGGAGGTTATGTTTCTGGTGTCTCCCCTGCCCAACCCCCCCTGAAGCCGTTGATCACTCTTCCTTGTCGCTTGTTGATAGCATGTACTGGTTAGAGCTGTTCCTGTTGTGCCGTCCATCCAAGCCCGAGCCCTCTCTATAGCCCCTGCACTGTGTACATTTAATCTGCAAGGTTAACTgctaattgcttttttttttttttggtgttaataatgatgatgatgaagatgatgatgatgataatgatgttaATAAGTATTTGAAATCGATATGATAATTACATgtgagaaaaaataataataatcccagAGCCATGTGTGCGAAAATATTTTGTACTttgctctgaaaaaaaataataataataagttttttttttcaaagtgttGTGCTCTATTTTGCCATGAgaagctttttaaaaacaaggtGATGAGCTGGAGTGCAGCAAAACACTGCTTTGAATTAGCCCCCCTTTGTGATGCTAGCATGCCACAATGCTAGACTAATTTAACAAGATAAGAGTTATTACAAAATGTAGGGTTTTGCTGTGCATCCACGCACTCACAAAGGGAGCGTTcaatgaaatgtaatataatttgtaccGTGTATGTATTCAAACGTTTCTTTTTAAGGCTCTGTACTGTATCGAATGTATGCTAACCTTTATGATGTCCCACCGTTTTTGTCAGCCATCTTGACGTCACAACCAAAAACTCTCGGCATACTCGAAATCCTGTGTGTTCGCCCCCTTCGTtcgttccttccttcctccagCCGCTTTCGAGAGGGAGCCAAATTAGTGGGAAATAGAGACGTAATTAGCGAGCGGATCGCTAAGCGAGGGCGCCGTCGCTCTTctcctcatccctccatctgcTGAGGAGCAGAGCTCATAAATCAAGCTCAATCCAGGAGCTGACAGGGACCCTCTTCAAGGACGACAGTGTCTCGGTGGTGACTAATTAACCACCACTTAAAGGCGCGTAGCGAAGACACTGCGACCATGTGCTCGGCGGCACATGGCTTAACACTGAGCGCTAGTTTCCACACGCGTATGCTGTATGCAATCTCTTACATTCATGGACAAAAAGCAAGGTTAGGAGCCGATCATTCAGTCACGTAAGTGCTGTATATAGCATGTTTTGACATTGTTGTGTCCCCATAGCTAATTTTGTCAAAACCAGCAATAACCAAACTAAAACGTAAATGTAAAGAAGTATCTAATTGGCGTAATCTGTTAAGTGTTGACCAGAGTGCCATGCTAATCTAATCCTGAAAGTGTTGTGTGATAAATTAATGTCATGTTTGTGATGGAAGGAGCTCTGACAGCGGTGTTTCAAGGTTGACCCGGCCTATATGCATCTCCATTTCTGttccatatctctctctctctctttctatctatctatctatatggatctatctatctatggtGTACAAATCCGTACTGTATAGCCACAATTGCAACACACACTTGCATGTTTTGAGATCCCATCCAAAAATTTCTCATTTGGGTTCAATTTGAAGCACAAAACCAGTCCCAGTGCTATTttttctctgtatctgtctgtctttgtcccTCTTTTCCTGTTCACGACTGCGCCGCCCATGTAAAGCTCAATGATCCATGGCGAACCTATCTGTGCTCATGTTTTCTCCTGAAcaataagtaaacaaaaaaaagataacaagtatgtcatgtttctcaatgtgggttataaaaaaaaaagcatgtcaaTGTTATGGGTggattttccttttaaaaaagtgtgaatatgaaaagtgtgtgtgtgggaaaggTTGGCTTTAAAATACGGAAGATTGAAGTGTGATTTGATATGAGCTCTCCTGTAGAGATGAGTGATTGTGGGTTACCTGGAGGTCTGGTTTAAGGGGGTGAAGAGAGGCATGTGAGGCAGGAAGGGTGAGATGGGCCTGCGCTGACCAGACACTGAACTCCCTCTGTATGCATCCGATTAACTGGAAGACACCAGCTACAAATCAGCTTGCAGATCCATTTTTTATAAAGGCAGATTGCATGTATTGATTTTTCCTGCTGCTTCGCTCTGCTGCTTGTGTccacacatttaaaatgtgcTTCAATGCTAATGTCCTACTACTGTCCACTGAGACTGATGGATATTACATGCGTTAGTAAGAGGCCTCTAATTGATCCACAaatgctgcagttttttttctttagccaCATGGATGCTCACAACATATCCAATCAGGGAGCTTACATGTGTCCAATCAGGAGGCACCTGAATTTACACGTGTCCAAACAGGAGGCACCTGAGATTACACATGTCCAATCAAGCACCACTTTAGCTTATATGTGTCTAATCAGGAGGCACCTGAGTGTACATATGTCCAATGAAGAGGCACATGAGTTTGCATCTGAGCATACAAGTGTCCAATCAAGCACCACTTTAGCTTATGTGTGTCCTGGTACCTGAGCTTACACCCGTCCAATCAGGAGGTATCTGAGCTTGCACCCGTCCAATCAGAAGGCACATGAACATTCCCTGCAGGACTTTGAAGAAACAATATGagtcttattttcttttaatagcTCTAATGTCACTGTTTTACTTTTCCATTTATTGAGTTAACAGCcgttttttccccaaagtggCATTTTCACAGACATGGAATGAAACCAAAAGCAGAAACGAAGGGCAATTTACTaggaacaaaaacagaaacagaatcaTCTTTAGCTATTCTAGTATGGAAACATTCATTTGAACTGATTCCCagttaataacaaaattaaaatatattatttaaaataatttagccATATACAACAAGTTTTTGTTAAtcttctattttattatattagacCTACATACAGCCTCTAAAATGAAAGGAATGAACCATTTTGTTCTAATGTTAGGGAGGTTGTGTTGGAGTTggaagacaacaacaacaaaaatgttcaaatatgtTAAAAAGTTCTTCTCAGAGCAAGCTGAATTGATTTCTGAGGCTTAGAAGTGAGATAGAATTTAATTAAAGTATAGatctgagcagctgagggttaagagTATTGCTTAAGGGCTTAATGGTTGCTTGCTGACAGTAAtgggatttgaacccacaaccttctgatcacaGATACAGCACTTTAACCCTTACTGAAATGActggaattattttatttagatgcTTTGTACCAAACTTCCAAATTTGATTTTAACCAAATATAAGGCAAAATGCACATTTAATtcctgatagatagatagatagatagatagatagatagatagatagatagaattaTTATGAATGAGGTGTTAAGTTTTTAAAATGACCCAATAATATATAGTTTCACTTTAAGATGTTTGTATGAAATGCTTTGTTATAATTTTATCGTAATCTGTGGTCACTTTGTTGCAGttttaatgtttgtaatgtaatattCAGAGGCCACTATAGAGAATGATGTAGTTTAATGGTTTAAGTTCAACAATTGAATAAGaaaacaattattaatttaagaCATAAATAGTAATACTTTGAGAAATGTCAGTGCATATGGATACTGTGTATCTTGAAGTAAAGGTGAGATCTCTGTGAGTTAgaaatggaaacaaaaaaaataaggtCTGTTTGGTTTTTTAGAAATAGCATAATTCAGTTTCTTTTCAGAGATAAGAGTATTTGTTGTCACGGGCAGATGATGCAAATAGAATAAAGAGAAAGGATTCTTCTGAAAGATAAAGAAAGATATAAACAAGGAAAGAATGCTTTGAGAAGTAGAATAAGggaatgaatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatcataTTAAAGCAATAGATTggtcaaaaatgaaatttacacaatttaccCATTAACACAGATGgattcaatcagccaagacatctTCAGTGTCCGATGTTTAATTCTtgggctaatgtagctaacaagtaatgaagCTGGAGCCTgttcttcagtgatgtcacacagacATATCAGTGTGGGTTAGGACACAGAAGACTACTATAATCTATACCAGGCTTCGTCAACTGGCAGACCAAGGTCTGGATGCAGTTCCAGAAAAGTATTTCTGTGGATCAATCTGAGAACtcaaatactgtagcagagccaaTCAGTGtacggggaaaaaaaactgtttgtagTTCAGCGAAAAACAATGGCTGATGTTGTGGCTTGttgcagccaatcacatgcatttatgtaaatgatgtaGTCGAAGGCTGTTCATCAgggaaagaaaatgttttgacaGACTTTCATAAATTTGTCATTTCACTTACcctgtctggtctgattagtgaattGTCAGCATGgattgttaaaaacaaaacaaaacaatgtttaaagatcagaagtatatatttattctcCACTCCAAGTTCAAAACAGACATCTCCGCTGTTAGTCAGATGTGGCGATAGTCAAATCTGATAACGTGAACTgccacaacaaaacaaaacataactatttatgttttattgtatttcgATTATAACCATGAACTAATCCTGAAtgattaagcattaaaaggtaacttgTCGCTATTCAGTCATGTTACTTGCTTGCaagcaaagaaagaataaacaaaacttCACTGTTTACCCAAACACTATAACATTATGAGGGCTTGGATGTAACAACATTAATGCATGGAAAGACTAATCAAGGACTAACACAAAATAGGTGATCACACATGGATAACAAACCAATGAGGAGCAGGGGTGGAGTCAGAAATGGAAtagaaatcaaaacaaacatgagCACATGGCATTTATGACATGAAGGGTAAACTGTTACAGTTGCTTCCTGGGTCCTGCCTCCCAAAGGTGGAATTGTACCAGAAAGCTGAGGTGATTATTATGCAGAAGGTTAATTAGTTAGGGTTAGAATTTTAACATCTAAACACAAGCTAAAGTATTTCTGCTACTTTACAATCTTGttataaaaaaacagaagcaagtatATGAAAATCTTGGCATCGGTTTTTGAAAAAGATTTTGGACAAGAGAATTCCATCACTTGTAAATGACATCATCCTTATAATATTTGGAGCTGACAGTAAAAAAGCAGAATGCTGGACACCAAACACGTCTTGGATGAATTGGGGTGTGGGTAcaaatgtgtaaatttcattttatgctAAACCATCCCTCTCCATTTGATGTTTAATTATCCTGCTAATTATCAAGGCTTTGTGTGCATAAGGTTTTTACGCAACAGGTGCAGCCTGTCAGTCATGTACAGCTGTATCGATAACACTCCGCTAATTATCTGAGCATAATTCAGTAGGTGTATTAAATGAGACATAGTTGAGGCTGTGTGTTTTCCTCAAAGCAGGAGGTTTAAGAAGCAACACTGCTGTGCACAAACAAGCCCATCACTCTGAATGTCAGTGGAGTGTGTCGCTCGCCCACTGGAAGCTGAAATTTCCGTCAGTCAAATGGGTGAACACAGGCTGTGGCATAGCACTTTGGCAGTGTTTGGATTGAAAGCACTTGATGTAATGTCAGGTGTTCACAGGTTAACAGGGACAGGTCGGTCAGTGAGTCAAgcccatctccctctctctgtgccCTTAGCCTCTTGCTCTTCCTccactcctcttcctcctcctctcctctggAAATGAGATGAAATGCCGCAAGCACCTCCAGCTCTTCATTCTGGTCTTTCTGTCGTATTAATGTGTGCGTTTaggcatgtctgtgtgtgggcACACATGCATGTTAGGGCATGCATTCTCTGACCTTGATTGATCATGACCTACTTTACATTCCAGTTCTCCATGCAattcagtgttttctctgcaGCATCAACAGAAAAGATGGAAAATCCAGAGCATTGTCTTCCACCTTCAACGAATCCTGTGCCGTGTTCCAAGTCATGTTTCagattttgtctgtttttgtcatttttattgtgtctgggttttgttttgttttgttttaatttttgtttttaaaagtccATAAAGGAGAGAACAAAGTGAAGGAATTAATCAGAAAGggagaaaataaaactgaattttgtttttaacataa

Function

symbol description
iglon5 Is expressed in central nervous system; head; optic vesicle; and retinal ganglion cell layer. Orthologous to human IGLON5 (IgLON family member 5).

NR:

description
PREDICTED: igLON family member 5 isoform X1

GO:

id name namespace
GO:0005515 protein binding molecular_function

KEGG:

id description
K06773 OPCML, OBCAM; opioid binding protein/cell adhesion molecule-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026924409.2 True 8353 mRNA 0.42 8 4070056 4206519

Neighbor

gene id symbol gene type direction distance location
LOC113532613 usf2 coding upstream 67620 3980428 ~ 4002436 (+)
LOC113532597 LOC108256466 coding upstream 124826 3940385 ~ 3945230 (+)
LOC113532598 LOC108256467 coding upstream 130029 3935562 ~ 3940027 (+)
LOC113532591 NA coding upstream 134880 3917415 ~ 3935176 (+)
nr1d2a nr1d2,LOC108256654,LOC105891902,LOC107743928,LOC107565234,LOC107700655 coding upstream 178153 3881971 ~ 3891903 (+)
LOC113532664 NA coding downstream 76769 4283288 ~ 4288230 (+)
si:dkeyp-97a10.2 LOC108256364 coding downstream 87850 4294369 ~ 4303530 (+)
dhdds dhdds,LOC106582847,LOC106605152 coding downstream 171504 4378023 ~ 4389461 (+)
slc9a1a slc9a1,LOC108256597,LOC107688187,LOC107671463,LOC107564092,LOC107552533 coding downstream 294968 4501487 ~ 4545347 (+)
LOC113532696 man1c1,LOC108426368,LOC105006133,LOC106582899,LOC106605146,LOC107601975,LOC107713850 coding downstream 349606 4556125 ~ 4770616 (+)
G326193 NA non-coding upstream 97054 3967532 ~ 3973002 (+)
G326178 NA non-coding upstream 123923 3945382 ~ 3946133 (+)
G326131 NA non-coding upstream 189115 3880677 ~ 3880941 (+)
G326023 NA non-coding upstream 367903 3701334 ~ 3702153 (+)
G325815 NA non-coding upstream 747726 3319917 ~ 3322330 (+)
G326288 NA non-coding downstream 112696 4319215 ~ 4359118 (+)
G326281 NA non-coding downstream 142262 4348781 ~ 4351847 (+)
LOC117595758 NA non-coding downstream 259989 4466508 ~ 4468850 (+)
G326359 NA non-coding downstream 335908 4542427 ~ 4542695 (+)
G326369 NA non-coding downstream 373031 4579550 ~ 4587322 (+)
hamp NA other upstream 56518 4011380 ~ 4013538 (+)
G325435 NA other upstream 1500317 2565700 ~ 2569739 (+)
LOC113533074 LOC108256184 other upstream 1854646 2204846 ~ 2215410 (+)
bola1 bola1,LOC107592543 other upstream 1925531 2142192 ~ 2144525 (+)
smg5 smg5,LOC107726659,LOC107671430,LOC107728478 other upstream 2150346 1899626 ~ 1919710 (+)
hmgn2 NA other downstream 185001 4391520 ~ 4394784 (+)
LOC113532991 LOC108256125 other downstream 192140 4398659 ~ 4434251 (+)
fabp10a LOC108256542,LOC107677662,LOC103026354,LOC106582922 other downstream 714461 4920980 ~ 4923681 (+)
srsf10a LOC108256391,LOC108426370,LOC101486875 other downstream 718262 4924781 ~ 4930155 (+)
klf10 LOC108256604 other downstream 777896 4984415 ~ 4989316 (+)

Expression


Co-expression Network