mrpl32 (mrpl32)



Basic Information


Item Value
gene id mrpl32
gene name mrpl32
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 5546551 ~ 5547833 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>XM_026924674.2
gcatgcgcagttgCTCTTCTTAGCCAAGTGACCGTGAGAATGTTGTAGTGTGTACGCGGGCTGAGGAGACATTATGTCGCTGACAGGATTTTTACGATTTCTAAGACATTCTTTGCAACAATTGGAGTCCAGTTTAATACAGACTGCAGGGTTTGACAGGAATTTAGGTCCAGCTCTAGCAGTGCATGGACCCAGCCTTCTTCCTCAACCTCAGCACATTAGAGATGATGACAGCTCTGAGCCCAGTTTCCTGGACAGCATTTTCTGGATGGCAGCACCCAAAAAGAGACGCACCATCGAGGTGAATCGCTGCAGAAGACGGAACCCAAATAAACTCATTAAAGTCAAGACGAACATTGAGCCATGTCCAGAGTGTGGGAACCTAAAACAGAAGCATGTTCTCTGTGGGTTCTGCTATGAGAAGGTCCAAAAGGAGACATCCAGGATTCGGAAGCAGATTGAAATCATGGAAGGCCGTCCTCACAACGCACCCACTGTGGACACTGTGGTTCTGTATGACAACGAAGCTCCTCGTGATGTAGACAAGGAGAAGAGAATAGTGGAGCGAAGCAGAAAACGCCCCTCCTGGTTTAGCCTGTAACTTCTCctaagttttgtttttgttttttttgtataatatcTTCAATAATAAAGTATTGAATCTGTTGGACTGCC

Function


symbol description
mrpl32 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL32 (mitochondrial ribosomal protein L32).

NR:

description
39S ribosomal protein L32, mitochondrial-like

GO:

id name namespace
GO:0006412 translation biological_process
GO:0015934 large ribosomal subunit cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02911 RP-L32, MRPL32, rpmF; large subunit ribosomal protein L32

RNA


RNA id representative length rna type GC content exon number start site end site
XM_026924674.2 True 675 mRNA 0.46 3 5546551 5547833
Loading

Neighbor


gene id symbol gene type direction distance location
adam22 adam22,LOC107719137,LOC107714333 coding upstream 53812 5415932 ~ 5492739 (+)
dbf4 dbf4 coding upstream 135501 5400933 ~ 5411050 (+)
rundc3b rundc3b,LOC107666772 coding upstream 159925 5356182 ~ 5386626 (+)
crot crot,LOC107738865,LOC107689876,LOC107549228,LOC107597963,LOC107681585,LOC107717792 coding upstream 215337 5317198 ~ 5331214 (+)
nmt2 nmt2,LOC107738873,LOC107681575 coding upstream 239412 5298302 ~ 5307139 (+)
ccdc127a ccdc127 coding downstream 2392 5550225 ~ 5553304 (+)
rnf144b LOC108256380,LOC108440759 coding downstream 17813 5565646 ~ 5583027 (+)
LOC113532582 LOC108256333,LOC108440761,LOC106605545,LOC103365049,LOC105896372 coding downstream 36583 5584416 ~ 5591733 (+)
sqlea sqle coding downstream 46016 5593849 ~ 5603013 (+)
si:dkey-122a22.2 LOC108256697 coding downstream 248329 5796162 ~ 5905417 (+)
G327071 NA non-coding upstream 4662 5541358 ~ 5541889 (+)
G326462 LOC108256729,LOC108426375 non-coding upstream 516761 5019782 ~ 5029790 (+)
G326458 NA non-coding upstream 562871 4983473 ~ 4983680 (+)
G326440 NA non-coding upstream 621915 4924178 ~ 4924636 (+)
G326429 NA non-coding upstream 742492 4803837 ~ 4804059 (+)
G327178 NA non-coding downstream 58037 5605870 ~ 5607099 (+)
G327385 zfpm2 non-coding downstream 285160 5832993 ~ 5833262 (+)
G327391 NA non-coding downstream 294386 5842219 ~ 5842438 (+)
G328024 NA non-coding downstream 1100447 6648280 ~ 6708779 (+)
G328161 NA non-coding downstream 1401726 6949559 ~ 6961376 (+)
G326997 NA other upstream 208300 5332268 ~ 5338251 (+)
acbd7 acbd7,LOC108256514 other upstream 231937 5311209 ~ 5314614 (+)
klf10 LOC108256604 other upstream 557235 4984415 ~ 4989316 (+)
srsf10a LOC108256391,LOC108426370,LOC101486875 other upstream 616396 4924781 ~ 4930155 (+)
fabp10a LOC108256542,LOC107677662,LOC103026354,LOC106582922 other upstream 622870 4920980 ~ 4923681 (+)
erp44 erp44,LOC107593692,LOC107723539,LOC107706132,LOC107596038 other downstream 1676189 7224022 ~ 7247279 (+)
LOC113532663 NA other downstream 2353682 7901515 ~ 7902608 (+)
osr2 osr2,LOC106591507 other downstream 2824852 8372685 ~ 8378896 (+)
LOC113532774 vps13b other downstream 2840354 8388187 ~ 8550238 (+)
G329111 LOC108426559,LOC103029568,LOC107664665,LOC108256430,LOC107550021,LOC107755710,LOC107742253,LOC107655802 other downstream 3067240 8615073 ~ 8665836 (+)

Expression


mrpl32(mrpl32) Expression in all Baseline Samples

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 300.
End of interactive chart.

mrpl32(mrpl32) Expression in each Bioproject

Bar chart with 3 bars.
mrpl32(mrpl32) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
End of interactive chart.

Co-expression Network