dbf4 (dbf4)


Basic Information

Item Value
gene id dbf4
gene name dbf4
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 5400933 ~ 5411050 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026924766.2
TTTGGCAGTGTGGAATTTATCTGTTAATTATTtcatgttattcatttttattaagtgTGAggaagtggattttctgagcggGAAAATGGAATTGTTTTGTTTGGCGTTTGTGGTTTAGagaataacaaaacaaacatagtGGAGCACTTCAGTGTTATATtttgcaaataaatgaataaatgtaaataaatatcaacTCGAGGACAACTCGAGTCCAGGAAGTTCATGAATATTCACGTAGACTTGCTTGGGtaatttgttagctagctgttagCTTCATCCGGGTTTGAACTTCCGGTGTAACGTTTGTCCAGTTTAAAAAACGGGGCACATTTAAACAACTCGGCCTGCAGATGCAAATCCAAACTGACACCAGAGCTCCTCATCACTGAATCTGGCAGCTGTAACAGAGCTCAACGTAGAGAAAGTAAAgctccTGCATGGTAACGGTAGCTAAGGAACTCTTAGCAACTCCTACACTGTAATGAAACACCAGAGCTTTCCCAGATCTACCAAACCACAATTTCAAGaCCCAAAACTGGACGACGATGAACACCGAAAAGCTGCATCTATCAGGAAACATCATCCAGCGTGTGAGCCAGTTCAGAAGAAGCCCTTGGCTGGGCGAATCTTTTATTTGGATCTACCGTGTAACAAACGCAGCCAGGCTTTAGAAACTGATATCAAGAGCCTTGGAGGAACAGTGGAAAAGTTCTTCAGTAAAGAGATTCGATACTTGGTGTCCAGTAAACCTGAAGCTCGGCATGTACAGCGGCTCGTTCAGGACTCCCCGGTGCCGAGTCCAGACTCGGGCCTCAGCTCCCCCCATCCTGGCAGCAGGAGGGACAGTCACGGCCACCGAGGCAGCTCACAGGGACCTGCTGACACCGTGGTTGTAAGCCGAGGGAAATCCTTAGTGGAGAAAGTCGTTAAGGAACAAGAGCGTATTCAGATGAACAGAATCCTGGCCAATGCACTTGAATGGGGTGTAAAAATCCTCTACATTGATGATGTAATTTCTTATATTGACAAGAAAAAGAGCACAATTGCTAAAGTCAGAGCAGCGACTCACTCAGTGAAGAaagctGCCAAACCTGAGCCCACAGATGGGACTGCTTCTCAGAAAAGCAAACcaGGACGAATCAGTCGCCCCTTTGTTAAAGTGGAGGACTCTAGCAGacactACCGTCCCCTCTATCTCCCCATGGCCAACATGCCTGTGTGTAACCTCCGATCTGCTGCCCCCTGCAGTCCCTTCTTGGAAGAAAACGATAAAGACGACCCTGGGAAAAAGACAAAAGGGTGCGGGTCTGGAGGAGATCGACGGGAGAAGAGCAGGAAAGACAGGCACCGAGGCCGTGAGGGAAAGGGACGAAGGAAAGGGGGCTACTGCGAATGCTGCATTGTCAAATACGACAACCTGAAAGCTCACCTGCAAAGTGAGCAGCATCAGGCTTTCTCTAGAAGTGAGGAGTACCTGGTGGTGGACAGAGTTATCTCAGGACTCACCTGTGATTTTGTACACATCAGCCCCCAAATAAAACGGGTGAAGTGCAGTGTTACCTCCCCGCTCATCGTTCCTGGACCAGCTGTAAGGAAGGACGGAGAAATGGAGGTTGAAGAGGAGGATGTGACTGACGAAACCCCGCTCTGGGGCTCTCACAACACGGAGCGATCGGTCCGCAAGCGCTCCAGAGAACTCTCCCAAAGTCCTAAAGGAGACTCAGCAGGACAATTGGACACTTTTCAGAAATCCCAGTCCAAGCGTGGTTCATTTGAATGGGAATCCAGTTCTAATGCTGCTTTACAGAAGGCTTTGTGTAcatcagtgtgtaacaccagaCAAGACTGTCTTTCTGAGTGTCTGGAGAGGACCAGGACCTCATTACACACTCGTTTAGAACAAAGGACTTCACAAAGCACACAGCATGTTAGACTTTCAGATCCTGCGGCGTTCGGTACGACTTGCAGTTCATTGGGTGCAGGGACCTCTCGCGTGGTGTCAGAGCCGTCTGTAATGTCAGACTTTCAGACTGCACCAAAGTTAGTTTCAGATGTTACAGAATGTACAACCGAGAGACCTTTCTGTAATACAGGCAAAGCACCTGACGTTACACATCATGGACCCATCACAGAGGAAATGTCTTCTTCCAACACGGACATTCTATCTGGAGCCTTGCAAAGAAAAGTGCGGACATGGAGGCGGAGACGAACCGCACCATCCGAGCCCCTGTGTGGCCTTTCTGGTAAACCTGTAGAATCCCAGACCCTTCAGTGTCTCGGAAAAGTTTCTGAGTCTCGGGGACGCTCAGCATCTGCCCTGGACTTATGGCAGCTCTTCCAGTCCAGCGGTGACATGGAGGAGGATTTTAAGGGTTTCTACAATTTGTAGAAAAGGATATTGAATATGAAATGAGCATTGGcaaagcttgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtttgtgtgtgttg
>XM_026924767.2
ATTTGGCAGTGTGGAATTTATCTGTTAATTATTtcatgttattcatttttattaagtgTGAggaagtggattttctgagcggGAAAATGGAATTGTTTTGTTTGGCGTTTGTGGTTTAGagaataacaaaacaaacatagtGGAGCACTTCAGTGTTATATtttgcaaataaatgaataaatgtaaataaatatcaacTCGAGGACAACTCGAGTCCAGGAAGTTCATGAATATTCACGTAGACTTGCTTGGGtaatttgttagctagctgttagCTTCATCCGGGTTTGAACTTCCGGTGTAACGTTTGTCCAGTTTAAAAAACGGGGCACATTTAAACAACTCGGCCTGCAGATGCAAATCCAAACTGACACCAGAGCTCCTCATCACTGAATCTGGCAGCTGTAACAGAGCTCAACGTAGAGAAAGTAAAgctccTGCATGGTAACGGTAGCTAAGGAACTCTTAGCAACTCCTACACTGTAATGAAACACCAGAGCTTTCCCAGATCTACCAAACCACAATTTCAAGaCCCAAAACTGGACGACGATGAACACCGAAAAGCTGCATCTATCAGGAAACATCATCCAGCGTGTGAGCCAGTTCAGAAGAAGCCCTTGGCTGGGCGAATCTTTTATTTGGATCTACCGTGTAACAAACGCAGCCAGGCTTTAGAAACTGATATCAAGAGCCTTGGAGGAACAGTGGAAAAGTTCTTCAGTAAAGAGATTCGATACTTGGTGTCCAGTAAACCTGAAGCTCGGCATGTACAGCGGCTCGTTCAGGACTCCCCGGTGCCGAGTCCAGACTCGGGCCTCAGCTCCCCCCATCCTGGCAGCAGGAGGGACAGTCACGGCCACCGAGGCAGCTCACAGGGACCTGCTGACACCGTGGTTGTAAGCCGAGGGAAATCCTTAGTGGAGAAAGTCGTTAAGGAACAAGAGCGTATTCAGATGAACAGAATCCTGGCCAATGCACTTGAATGGGGTGTAAAAATCCTCTACATTGATGATGTAATTTCTTATATTGACAAGAAAAAGAGCACAATTGCTAAAGTCAGAGCAGCGACTCACTCAGTGAAGAaagctGCCAAACCTGAGCCCACAGATGGGACTGCTTCTCAGAAAAGCAAACGACGAATCAGTCGCCCCTTTGTTAAAGTGGAGGACTCTAGCAGacactACCGTCCCCTCTATCTCCCCATGGCCAACATGCCTGTGTGTAACCTCCGATCTGCTGCCCCCTGCAGTCCCTTCTTGGAAGAAAACGATAAAGACGACCCTGGGAAAAAGACAAAAGGGTGCGGGTCTGGAGGAGATCGACGGGAGAAGAGCAGGAAAGACAGGCACCGAGGCCGTGAGGGAAAGGGACGAAGGAAAGGGGGCTACTGCGAATGCTGCATTGTCAAATACGACAACCTGAAAGCTCACCTGCAAAGTGAGCAGCATCAGGCTTTCTCTAGAAGTGAGGAGTACCTGGTGGTGGACAGAGTTATCTCAGGACTCACCTGTGATTTTGTACACATCAGCCCCCAAATAAAACGGGTGAAGTGCAGTGTTACCTCCCCGCTCATCGTTCCTGGACCAGCTGTAAGGAAGGACGGAGAAATGGAGGTTGAAGAGGAGGATGTGACTGACGAAACCCCGCTCTGGGGCTCTCACAACACGGAGCGATCGGTCCGCAAGCGCTCCAGAGAACTCTCCCAAAGTCCTAAAGGAGACTCAGCAGGACAATTGGACACTTTTCAGAAATCCCAGTCCAAGCGTGGTTCATTTGAATGGGAATCCAGTTCTAATGCTGCTTTACAGAAGGCTTTGTGTAcatcagtgtgtaacaccagaCAAGACTGTCTTTCTGAGTGTCTGGAGAGGACCAGGACCTCATTACACACTCGTTTAGAACAAAGGACTTCACAAAGCACACAGCATGTTAGACTTTCAGATCCTGCGGCGTTCGGTACGACTTGCAGTTCATTGGGTGCAGGGACCTCTCGCGTGGTGTCAGAGCCGTCTGTAATGTCAGACTTTCAGACTGCACCAAAGTTAGTTTCAGATGTTACAGAATGTACAACCGAGAGACCTTTCTGTAATACAGGCAAAGCACCTGACGTTACACATCATGGACCCATCACAGAGGAAATGTCTTCTTCCAACACGGACATTCTATCTGGAGCCTTGCAAAGAAAAGTGCGGACATGGAGGCGGAGACGAACCGCACCATCCGAGCCCCTGTGTGGCCTTTCTGGTAAACCTGTAGAATCCCAGACCCTTCAGTGTCTCGGAAAAGTTTCTGAGTCTCGGGGACGCTCAGCATCTGCCCTGGACTTATGGCAGCTCTTCCAGTCCAGCGGTGACATGGAGGAGGATTTTAAGGGTTTCTACAATTTGTAGAAAAGGATATTGAATATGAAATGAGCATTGGcaaagcttgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtttgtgtgtgttg
>XM_026924768.2
GATTTGGCAGTGTGGAATTTATCTGTTAATTATTtcatgttattcatttttattaagtgTGAggaagtggattttctgagcggGAAAATGGAATTGTTTTGTTTGGCGTTTGTGGTTTAGagaataacaaaacaaacatagtGGAGCACTTCAGTGTTATATtttgcaaataaatgaataaatgtaaataaatatcaacTCGAGGACAACTCGAGTCCAGGAAGTTCATGAATATTCACGTAGACTTGCTTGGGtaatttgttagctagctgttagCTTCATCCGGGTTTGAACTTCCGGTGTAACGTTTGTCCAGTTTAAAAAACGGGGCACATTTAAACAACTCGGCCTGCAGATGCAAATCCAAACTGACACCAGAGCTCCTCATCACTGAATCTGGCAGCTGTAACAGAGCTCAACGTAGAGAAAGTAAAgctccTGCATGGTAACGGTAGCTAAGGAACTCTTAGCAACTCCTACACTGTAATGAAACACCAGAGCTTTCCCAGATCTACCAAACCACAATTTCAAGaCCCAAAACTGGACGACGATGAACACCGAAAAGCTGCATCTATCAGGAAACATCATCCAGCGTGTGAGCCAGTTCAGAAGAAGCCCTTGGCTGGGCGAATCTTTTATTTGGATCTACCGTGTAACAAACGCAGCCAGGCTTTAGAAACTGATATCAAGAGCCTTGGAGGAACAGTGGAAAAGTTCTTCAGTAAAGAGATTCGATACTTGGTGTCCAGTAAACCTGAAGCTCGGCATGTACAGCGGCTCGTTCAGGACTCCCCGGTGCCGAGTCCAGACTCGGGCCTCAGCTCCCCCCATCCTGGCAGCAGGAGGGACAGTCACGGCCACCGAGGCAGCTCACAGGGACCTGCTGACACCGTGGTTGTAAGCCGAGGGAAATCCTTAGTGGAGAAAGTCGTTAAGGAACAAGAGCGTATTCAGATGAACAGAATCCTGGCCAATGCACTTGAATGGGGTGTAAAAATCCTCTACATTGATGATGTAATTTCTTATATTGACAAGAAAAAGAGCACAATTGCTAAAGTCAGAGCAGCGACTCACTCAGTGAAGAaagctGCCAAACCTGAGCCCACAGATGGGACTGCTTCTCAGAAAAGCAAACcaGGACGAATCAGTCGCCCCTTTGTTAAAGTGGAGGACTCTAGCAGacactACCGTCCCCTCTATCTCCCCATGGCCAACATGCCTGTGTGTAACCTCCGATCTGCTGCCCCCTGCAGTCCCTTCTTGGAAGAAAACGATAAAGACGACCCTGGGAAAAAGACAAAAGGGTCTGGAGGAGATCGACGGGAGAAGAGCAGGAAAGACAGGCACCGAGGCCGTGAGGGAAAGGGACGAAGGAAAGGGGGCTACTGCGAATGCTGCATTGTCAAATACGACAACCTGAAAGCTCACCTGCAAAGTGAGCAGCATCAGGCTTTCTCTAGAAGTGAGGAGTACCTGGTGGTGGACAGAGTTATCTCAGGACTCACCTGTGATTTTGTACACATCAGCCCCCAAATAAAACGGGTGAAGTGCAGTGTTACCTCCCCGCTCATCGTTCCTGGACCAGCTGTAAGGAAGGACGGAGAAATGGAGGTTGAAGAGGAGGATGTGACTGACGAAACCCCGCTCTGGGGCTCTCACAACACGGAGCGATCGGTCCGCAAGCGCTCCAGAGAACTCTCCCAAAGTCCTAAAGGAGACTCAGCAGGACAATTGGACACTTTTCAGAAATCCCAGTCCAAGCGTGGTTCATTTGAATGGGAATCCAGTTCTAATGCTGCTTTACAGAAGGCTTTGTGTAcatcagtgtgtaacaccagaCAAGACTGTCTTTCTGAGTGTCTGGAGAGGACCAGGACCTCATTACACACTCGTTTAGAACAAAGGACTTCACAAAGCACACAGCATGTTAGACTTTCAGATCCTGCGGCGTTCGGTACGACTTGCAGTTCATTGGGTGCAGGGACCTCTCGCGTGGTGTCAGAGCCGTCTGTAATGTCAGACTTTCAGACTGCACCAAAGTTAGTTTCAGATGTTACAGAATGTACAACCGAGAGACCTTTCTGTAATACAGGCAAAGCACCTGACGTTACACATCATGGACCCATCACAGAGGAAATGTCTTCTTCCAACACGGACATTCTATCTGGAGCCTTGCAAAGAAAAGTGCGGACATGGAGGCGGAGACGAACCGCACCATCCGAGCCCCTGTGTGGCCTTTCTGGTAAACCTGTAGAATCCCAGACCCTTCAGTGTCTCGGAAAAGTTTCTGAGTCTCGGGGACGCTCAGCATCTGCCCTGGACTTATGGCAGCTCTTCCAGTCCAGCGGTGACATGGAGGAGGATTTTAAGGGTTTCTACAATTTGTAGAAAAGGATATTGAATATGAAATGAGCATTGGcaaagcttgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtttgtgtgtgttg

Function

symbol description
dbf4 Predicted to enable protein serine/threonine kinase activator activity. Predicted to be involved in positive regulation of nuclear cell cycle DNA replication and regulation of cell cycle phase transition. Predicted to be part of Dbf4-dependent protein kinase complex. Predicted to be active in nucleus. Orthologous to human DBF4 (DBF4 zinc finger).

NR:

description
PREDICTED: protein DBF4 homolog A-like

GO: NA

KEGG:

id description
K06629 ASK, DBF4; activator of S phase kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026924766.2 True 2509 mRNA 0.48 14 5400935 5411050
XM_026924767.2 False 2507 mRNA 0.48 14 5400934 5411050
XM_026924768.2 False 2505 mRNA 0.48 14 5400933 5411050

Neighbor

gene id symbol gene type direction distance location
rundc3b rundc3b,LOC107666772 coding upstream 14307 5356182 ~ 5386626 (+)
crot crot,LOC107738865,LOC107689876,LOC107549228,LOC107597963,LOC107681585,LOC107717792 coding upstream 69719 5317198 ~ 5331214 (+)
nmt2 nmt2,LOC107738873,LOC107681575 coding upstream 93794 5298302 ~ 5307139 (+)
fam171a1 fam171a1 coding upstream 106190 5260438 ~ 5294743 (+)
LOC113532775 LOC108256159 coding upstream 142374 5254686 ~ 5258559 (+)
adam22 adam22,LOC107719137,LOC107714333 coding downstream 4882 5415932 ~ 5492739 (+)
mrpl32 mrpl32 coding downstream 135501 5546551 ~ 5547833 (+)
ccdc127a ccdc127 coding downstream 139175 5550225 ~ 5553304 (+)
rnf144b LOC108256380,LOC108440759 coding downstream 154596 5565646 ~ 5583027 (+)
LOC113532582 LOC108256333,LOC108440761,LOC106605545,LOC103365049,LOC105896372 coding downstream 173366 5584416 ~ 5591733 (+)
G326462 LOC108256729,LOC108426375 non-coding upstream 371143 5019782 ~ 5029790 (+)
G326458 NA non-coding upstream 417253 4983473 ~ 4983680 (+)
G326440 NA non-coding upstream 476297 4924178 ~ 4924636 (+)
G326429 NA non-coding upstream 596874 4803837 ~ 4804059 (+)
LOC113532560 NA non-coding upstream 597422 4800572 ~ 4803511 (+)
G327071 NA non-coding downstream 130308 5541358 ~ 5541889 (+)
G327178 NA non-coding downstream 194820 5605870 ~ 5607099 (+)
G327385 zfpm2 non-coding downstream 421943 5832993 ~ 5833262 (+)
G327391 NA non-coding downstream 431169 5842219 ~ 5842438 (+)
G328024 NA non-coding downstream 1237230 6648280 ~ 6708779 (+)
G326997 NA other upstream 62682 5332268 ~ 5338251 (+)
acbd7 acbd7,LOC108256514 other upstream 86319 5311209 ~ 5314614 (+)
klf10 LOC108256604 other upstream 411617 4984415 ~ 4989316 (+)
srsf10a LOC108256391,LOC108426370,LOC101486875 other upstream 470778 4924781 ~ 4930155 (+)
fabp10a LOC108256542,LOC107677662,LOC103026354,LOC106582922 other upstream 477252 4920980 ~ 4923681 (+)
erp44 erp44,LOC107593692,LOC107723539,LOC107706132,LOC107596038 other downstream 1812972 7224022 ~ 7247279 (+)
LOC113532663 NA other downstream 2490465 7901515 ~ 7902608 (+)
osr2 osr2,LOC106591507 other downstream 2961635 8372685 ~ 8378896 (+)
LOC113532774 vps13b other downstream 2977137 8388187 ~ 8550238 (+)
G329111 LOC108426559,LOC103029568,LOC107664665,LOC108256430,LOC107550021,LOC107755710,LOC107742253,LOC107655802 other downstream 3204023 8615073 ~ 8665836 (+)

Expression


Co-expression Network