neto1l (neto1)


Basic Information

Item Value
gene id neto1l
gene name neto1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 13765859 ~ 13867147 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937887.2
tgtgtgtctgagctgTTGTGCTGGATGGATCCTGCAgtataacagattttttttttttttttaattttggcaCAGATTTGGATTACAAATGCATTTGAGGGGAAAGAGATGATATGATGCACGTGCGTTTTAACAGCCAGTGCAGCATAAAGCTGTGCTATGGAAGAAGTCAGAAAACTAAAGCACAGCATTAGGAATGAACTCGGCGGTGCTCAGTGCTCACCAAGGATGaagagaaattaaaatatacatcaatctttaaaaaaaagcaaaaaaaaaaaaactgcacgtGGATGAAGTTGCATGTTGCGAACAAGTGAAAGCAAGataaggaagaagaaaaagaagaagaagaagtgatgAACTGGAGGATTGGATACCCTGAGCTGCAGATGCACAGATGCATGGAGAGATCGATGGATGGATACGtgcgttgttgttgttgttgctgttgtttcttATGAGGATGGAGGCTTTTGTTGaaatgttgttttctttgcaaaaCCTCCCTCGACTTGCTTCAAAAGCGCTAAAGGTGGAGCAATGCAGGGAAGCCGAATGCGCGCATGCAGCATGAAACACTCCTCTCTAACAAagtggtgaatgtgtgtgtgtgtgtgtgttttaatacaCTGCTCATTGAAcagttcttttatttctctggcTGGATTTCTTGCTGTACTTCTGAAATAAGCGCGCGATCACCCAGGGGCTGGTGTGCGCGAGACTCCGCACCACtgattgctttgttttttttttttttggaaatatccTTCGTTTCTTTTCTAATTATTCCTATCTAAATGGAAGTATTGGAGATCGAAGGCAGTGGTGAAAGGAGCAGACATGGTTCATGGGCGCAGTTTCCTTCACGTTGTTGCAGGTCTCCTCATGGTTGGCTTGTCTGTTGCgacaaaaaaagaagcagTGAAAAACAACTCAGGGGTTCAACCAGCAGGACAGTGTGGAACGTGGGTGAAAAAACCAGAGGGAGGACTCTTCACATCCCCCAATTACCCCAACAAATACCCACCAGAGCGAGAGTGCATTTACGTCATTGAAGCTCCCCCGAGACAGTGCATTGATCTCTTCTTTGACGAGAAGTACTCAATAGAGCCTTCATGGGAATGTAAATTTGACCACATCGAAGTGCGTGACGGACCTTTTGGCTTTTCTCCAATAATCGGACGCTACTGTGGCCAGCAGAGCCCGCAGTACATCAGGTCAAGCGGCCGATACCTCTGGATAAAATTCGTAGCGGATGGTGAACTAGAAGCCATCGGATTTTCAGCAAACTACAACTTCACCACAGATCCTGACTTTAAAGACATGGGAGTCCCCAAGCCTCTTCCCGCATGTGAGTTTGAGATGAGTGGACCCGAAGGCATCATTGAATCACAACAGATAATCAGAGATGGTAAAGCTTTACAGACGGAGGCCGTGGACTGCAAGTGGTTCATCCGAGCTCCTCCTCGCTCTAAGATCTACCTGCGGTTCCTGGACTATGAGATGCAGAACTCAAATGAGTGCAAGCGAAACTTTGTGGCTGTGTATGACGGCAGCGGCTCTGTTGAAGATCTGAAGTGTAAATTTTGCAGCACGGTGGCTAGTGACGTGACATTGAGAACCGCACTGGGTGTTGTGCGTATGTGGGCCGATGAGCACAGCCGCCGCAGCCGCTTCCGGATCCTCTACACCACGTTTAAAGAGCCTCCCTGCGAGGCTGACATGTTCTTCTGCCACAGTAACATGTGCATCAACAACTCACTGGTGTGTAATGGGATCCAGAACTGTGTGTATCCATGGGACGAAAATCACTGCAAAGagaaaagaaaagcgaACATCCTGGACAACCTGAACAACACTAACAGCAGCATCATTGGTGTGACGTGCTGCATCGTCCTCGTCCTCCTCGTCGTCTCCGTCACGGTGCAGATCAAGCAGCCACGGAAGAAGTACGTGGTGCAGCGTGACGACTTTCAGGAAGTGTTCCAGGAAACGCCTCGGCGCTATGACCTCGGTGACATTGCCGAACTTACAGACGATGTTGAGACGACCTTTCAGAAGCGCTGCGTTCACGAGCACCACTGTGGCCGTGCCAAAACTGCGGCAGTGATGGATCcgcatcatcaccaccaccattatcatcatcatcatcacgatAACCGGCGCAGCATCGTGGTCATGAAGCACAGCTACTCGCAAGAAGAAGCAGAGATGGAGGATGAGCTTGATGAGGAGGTGCCAACCACCAGCCACCGACTGGCCAGACACGACAAAGCAGTGCAGCGGTTCTGCCTCATTGGGTCTCTAAGCAAACACGAGTCAGAGTACAACACGACTAGGGTGTAGGAGACGATCAGGAGGCAGATGCATCACATCCCTGCATCTTCCCAGGTGTGACAACTTGAAGGAGGAAACTTGTAAACCCTGCTACAACACTGTTGCGCTCAGTGACAAACTTAACAGCAGTTACACCTGCATTTTCTCTGGCGGATTAAACATTTGTTGGGTTGCTTGTGCAGTGGATTTTGTTCCTATGCCGACTGAACACTAAGGACAGAATTTCTACAACCATAAACGATAAACTGTAATGTGGGTGTGTTGCTGGGGTTTTGGTTAGGATTTGTCATTCTATTCTCAATTGTTTCCTATGTGTGGAATAATCTgacaagttgtttttttcctctctcagttGACCTTTAAGAAACTCTTGTAACGCTAAAACGACTTTTGAATATAAACTATGCTGAATGTTGATGCAAAATTTGACCTTTTTCCCCAAATTAAAGTGGACTACTTTCCTGTGATAGGTTTTCTAATCTTGTTACAGCTGCCCAGTAATTTaccatttaacattaaataccTCTTTATGAACAAAAACTGAAGGAAGAATGTGAAGCCCCTAAAATATTAACAATCTATAAAAATTAGATTAGCAAGTCTTGTCTATGCAtatgtcaaaagaaaaaaaaacgctatccgatgttttgtttttctaccAATAAAATGGAGGCAAAGACACATACATTGGATTGTTTTCTTCATTAATCATCACTGGGA

Function

symbol description
neto1 Predicted to act upstream of or within regulation of neuronal synaptic plasticity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human NETO1 (neuropilin and tolloid like 1).

NR:

description
neuropilin and tolloid-like protein 1 isoform X2

GO: NA

KEGG:

id description
K24360 NETO; neuropilin and tolloid-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937887.2 True 3063 mRNA 0.45 11 13765859 13867147

Neighbor

gene id symbol gene type direction distance location
timm21 timm21,LOC107662560,LOC106590615 coding downstream 11502 13749291 ~ 13754357 (-)
si:dkey-118j18.2 si:dkey-118j18.2,LOC108256605,LOC106578436 coding downstream 16226 13737766 ~ 13749633 (-)
sema5a sema5a,LOC108426609,LOC106578437 coding downstream 47744 13509875 ~ 13718115 (-)
cct5 cct5,LOC107686714,LOC107695377 coding downstream 359782 13397268 ~ 13406077 (-)
eif2s3 eif2s3,if2g,LOC106590489,LOC107741782 coding downstream 393816 13361369 ~ 13372043 (-)
fbxo15 fbxo15 coding upstream 87410 13954557 ~ 13968352 (-)
LOC113541290 socs6,LOC107689432,LOC107596044,LOC107727394 coding upstream 349991 14217138 ~ 14223311 (-)
dok6 dok6,LOC107657792,LOC107596042,LOC107741641,LOC107589921,LOC107689434,LOC107727392 coding upstream 445935 14313082 ~ 14373453 (-)
pi15a pi15a,LOC108256124,LOC107758808,LOC107589991,LOC107657806,LOC107689437,LOC107706855 coding upstream 552747 14419894 ~ 14429370 (-)
gdap1 gdap1,LOC107693809,LOC107589927 coding upstream 608790 14475937 ~ 14482845 (-)
G331569 mtrr non-coding downstream 352048 13412902 ~ 13413811 (-)
G331568 NA non-coding downstream 358401 13406386 ~ 13407458 (-)
G331565 NA non-coding downstream 383424 13380609 ~ 13382435 (-)
G331560 c8g non-coding downstream 418002 13343614 ~ 13347857 (-)
G331546 NA non-coding downstream 486473 13278136 ~ 13279386 (-)
G332056 NA non-coding upstream 599247 14466394 ~ 14466613 (-)
G332169 NA non-coding upstream 646588 14513735 ~ 14522615 (-)
G332147 NA non-coding upstream 670105 14537252 ~ 14564704 (-)
G332164 NA non-coding upstream 676885 14544032 ~ 14634926 (-)
G332196 NA non-coding upstream 847070 14714217 ~ 14797198 (-)
LOC113541105 NA other downstream 3244 13757658 ~ 13762615 (-)
LOC113541288 NA other downstream 1087921 12676545 ~ 12677938 (-)
cdv3 cdv3 other downstream 1769159 11944054 ~ 11996700 (-)
G330379 NA other downstream 2682708 11082268 ~ 11083151 (-)
ackr4b ackr4 other downstream 2835084 10923126 ~ 10930775 (-)
LOC113541102 msc other upstream 1065848 14932995 ~ 14937404 (-)
LOC113541115 kcnb2,si:dkey-192j17.1,LOC107657825,LOC107560266,LOC108426548,LOC107754205,LOC107589933 other upstream 1095690 14962837 ~ 15065810 (-)
sec61g NA other upstream 1748351 15615498 ~ 15618842 (-)
cpa6 cpa6,LOC106579545 other upstream 2414124 16281271 ~ 16312916 (-)
oxsr1b oxsr1,oxsr1b other upstream 2962643 16829790 ~ 16879884 (-)

Expression


Co-expression Network