cd226


Basic Information

Item Value
gene id cd226
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 14297560 ~ 14309471 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937909.2
ATGCTGCATTCATTTTCACTCAGACTGTGACGATGGAGGCTGTACAAAAGGAGAACTGGTACTTCATGGCACTtctgatttctctctcttttctcaaagtctcagagCAGCTGAAGTCTCCAGACAGCGCAGTAAAACTTGAGGACGGGATGCTGTTGGACTGCTTATGTCCCTGGAATGGTAACCTCATCATGGTGTCATGGACTAAAGGAGTCTATTCAACTCCCCTCGCCATTTATCACCCACAGTACGGCGTCAATTTCAACGCTGCTTATGACGGTAGAGTTAAGTTCATCAATTCATCACAGATGGATGGCAGCATCAGAATAACGAACGTCACTGAAGAAGACGAGGGTGTGTATCACTGCTCGGTGCAGACGTTTCCTCAAGGGTCATGGACCAAAGATACGCTGGTGCAAAAACAAGTCACCAGCAGCACCGTCCTCACCCACAATCCCAACACCAAACTTATCGTCTCTGAAAGCGAAGACGTGACCATCAGCTGTAGGCATGACAGCATCGTGTACGAGGTCAGCGTGGAGAGGATGGAAGGAGCGGACGGAGGGAGCAGTCTGATAGCAGTGTGTAAGCAGAACGCTGATGTTGTGGAGCTCAACGAGTATCTACACAGAGGAAATGTGAACTGCAGTGACGAGATGGAGATGAAGCTGCATTTAAACAACGTGAGCCAAGATGATGGCGGGATTTATCGCTGTAACTTCAGCACAGACGCCGGGTTTTCTAGCAACCTTATCCTGCTCACAATGTTCCCCAGTTCCAAAGGACTCAGTGATGCTCAGAACAGGTGGTATATTTAcattggaggaggagtagctgGAGCACTTGTCCTGATGTCCATCGCTCTCTTATTCATGTGGAGGAGCAGGAGGAAGGTGAGGAGATTGGAGTACAGGACACAGTTACATACCACCAAAAGACAGCATATGTACACTAATGAGCCAGGAGGAGTGTATGACAGGATGAAAAAGACAACCAGGAACCAAAGAAAGAACAATCCTATATACGTCAACTTCCAAAACACCAGAGCtcagaagaaaggaaaaagatgaCGTTTTCAAGTTTATACTGAGAAGACTTCTGAATATGTGATGGACTATTGACCTCGTTTGCCCTCCTGTGATTAgactttgattgacaggtgacgAGACCATACTGGCTTCAAGTAAAgcagaaaagaaggaagagcCACTGAGAAATCTCCTGGCCACAGAAGGCCCATGatgacattaaaaaacattttgaagacTATTTTGAAGAAAGCGCGTACAGGACAGTTTAATTggaataattaaatgaaaaaaggtgACATTATTATATGAAATGAATCGTGGATGGAGTGATGATATCCTGTGGCCTCCTGAGAAGACGacctttttttgcacatttaatatTGCAGTTTatacaacagcgctgttgaattcttaagtctaattggtcagcaggtgttgattctttttctataacggcagctctAACAGGAATcttggctgtaattcaaatcacaggtttatattaatgcacttgttctaatacattatcgcttctatagtaacaacacacATAGGGACCTGTATGatggatgctccatataaacagattaaaaacgtgtgtaattgttgatatggtgaagttttctg
>XM_026937910.2
ATGCTGCATTCATTTTCACTCAGACTGTGACGATGGAGGCTGTACAAAAGGAGAACTGGTACTTCATGGCACTtctgatttctctctcttttctcaaagtctcagagCAGCTGAAGTCTCCAGACAGCGCAGTAAAACTTGAGGACGGGATGCTGTTGGACTGCTTATGTCCCTGGAATGGTAACCTCATCATGGTGTCATGGACTAAAGGAGTCTATTCAACTCCCCTCGCCATTTATCACCCACAGTACGGCGTCAATTTCAACGCTGCTTATGACGGTAGAGTTAAGTTCATCAATTCATCACAGATGGATGGCAGCATCAGAATAACGAACGTCACTGAAGAAGACGAGGGTGTGTATCACTGCTCGGTGCAGACGTTTCCTCAAGGGTCATGGACCAAAGATACGCTGGTGCAAAAACAAGTCACCAGCAGCACCGTCCTCACCCACAATCCCAACACCAAACTTATCGTCTCTGAAAGCGAAGACGTGACCATCAGCTGTAGGCATGACAGCATCGTGTACGAGGTCAGCGTGGAGAGGATGGAAGGAGCGGACGGAGGGAGCAGTCTGATAGCAGTGTGTAAGCAGAACGCTGATGTTGTGGAGCTCAACGAGTATCTACACAGAGGAAATGTGAACTGCAGTGACGAGATGGAGATGAAGCTGCATTTAAACAACGTGAGCCAAGATGATGGCGGGATTTATCGCTGTAACTTCAGCACAGACGCCGGGTTTTCTAGCAACCTTATCCTGCTCACAATGTTCCCCAGTTCCAAAGGACTCAGTGATGCTCAGAACAGGTGGTATATTTAcattggaggaggagtagctgGAGCACTTGTCCTGATGTCCATCGCTCTCTTATTCATGTGGAGGAGCAGGAGGAAGGTGAGGAGATTGGAGTACAGGACACAGTTACATACCACCAAAAGACAGAAATGGAGAAACGATCTCTGAAGATGTGATGACAAGAGAACAACCGTTATCAGTGGATTATAGTGTCACCGGTGGAAGACAAACTGCCTTTATGTGTTAAGCTCAAGAAAAgtataaatgactttttttaacGCTGGCTGTAAAGTGGATGATTTGGCTTTTATAGATGATGCTGTGG

Function

NR:

description
CD226 antigen isoform X3

GO: NA

KEGG:

id description
K06567 CD226, DNAM1; CD226 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937909.2 True 1658 mRNA 0.44 6 14297560 14308674
XM_026937910.2 False 1119 mRNA 0.47 6 14297560 14309471

Neighbor

gene id symbol gene type direction distance location
rttn rttn coding upstream 1789 14234044 ~ 14295771 (+)
cbln2b cbln2,cbln2b,LOC107657802,LOC107596058,LOC107741967 coding upstream 317371 13975240 ~ 13980189 (+)
mtrr mtrr coding upstream 849812 13406164 ~ 13447748 (+)
cmbl cmbl coding upstream 901099 13386074 ~ 13396461 (+)
trnat-agu_17 NA coding upstream 912286 13385201 ~ 13385274 (+)
crispld1a LOC108256732 coding downstream 77490 14386961 ~ 14405762 (+)
jph1a LOC108256670 coding downstream 177499 14486970 ~ 14517787 (+)
LOC113541072 NA coding downstream 220193 14529664 ~ 14535320 (+)
zfhx2 NA coding downstream 234520 14543991 ~ 14564674 (+)
pabpn1 pabpn1,LOC108256547,LOC107758815,LOC107589928,LOC107596039 coding downstream 256321 14565792 ~ 14577243 (+)
LOC117595809 NA non-coding upstream 335376 13958024 ~ 13962184 (+)
G331502 NA non-coding upstream 914924 13380644 ~ 13382636 (+)
G331496 eif2s3,LOC102783563 non-coding upstream 934858 13361369 ~ 13362702 (+)
G331498 NA non-coding upstream 936542 13360280 ~ 13361018 (+)
G331468 NA non-coding upstream 1007161 13287447 ~ 13290399 (+)
G332111 NA non-coding downstream 378692 14688163 ~ 14703270 (+)
G332238 NA non-coding downstream 635520 14944991 ~ 14945212 (+)
G332248 NA non-coding downstream 646389 14955860 ~ 14956067 (+)
G332334 NA non-coding downstream 756504 15065975 ~ 15113514 (+)
G332348 NA non-coding downstream 892346 15201817 ~ 15202305 (+)
G331476 NA other upstream 1039144 13257894 ~ 13258416 (+)
G331263 LOC108256200,LOC100304628 other upstream 1584882 12706939 ~ 12712678 (+)
prkag2a prkag2,prkag2a,LOC108256599,LOC108434244,LOC106590432,LOC106579597,LOC107729655,LOC107590261,LOC107757712 other upstream 2140773 12062332 ~ 12156787 (+)
ankha ankh,ankha,LOC108256444,LOC108434238,LOC107724566 other upstream 2549001 11717415 ~ 11748559 (+)
G330257 NA other upstream 3322645 10973264 ~ 10974915 (+)
stau2 stau2,LOC107691439 other downstream 824882 15134353 ~ 15314968 (+)
si:ch73-173p19.2 LOC108256301 other downstream 942164 15251635 ~ 15265895 (+)
G332636 NA other downstream 1256704 15566175 ~ 15566663 (+)
hhatlb hhatl,hhatlb,LOC108256744,LOC107585011,LOC107701661 other downstream 2790693 17100164 ~ 17110027 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other downstream 2975611 17285082 ~ 17302004 (+)

Expression


Co-expression Network