thtpa (thtpa)


Basic Information

Item Value
gene id thtpa
gene name thtpa
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 14536562 ~ 14540764 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937932.2
GAAATTTTTGCCCAGAAGCCGGAAGTAAAGCCTTCTAAATGCATTATGGGATTGACTAAAGCTTTGAAGTAATGCCTGTGGAGGTGGAGAggaagtttgtgtgtgattcACACATCCTAGAGAAACTGAAGGACATTGGAGCTGTATGTATGGGTCAGTATGAATTTAAAGACCAGTACTTCGACTCAGCAGACTTCACATTAACCCTAAAAAATTTCTGGTTGAGAAAACGTGAAGGATCCTGGGAGCTAAAACGGCCCCCGTCATCTCATCTGAATGCAGAGAAAAGAGCACAGGATGTGTGCACTAATTACAGAGAGATCACAGATCTGCTTCAGATCAGAGCTGAACTTATGGCTATCGTGGGCattcacacagaacacacattaGACTCCTCACAGACAGAACAAGCTAAAGATGTTCATGCTGAGTTTGAAAAATGGCTGCAGGATTTGAAGCTGGAGTGTTTTGCGGAGTTTACCACCGTCCGGTGTTCTTACACGCTGGAGGACGAAGGGGACAACAGAAGAGTCCGGATAGATCTGGATCAGGCCGATTTTGGCTACTGCGTAGGAGAGATCGAAGTTCTTGTTTCAGAAGGGGTCGAGATGACGTCTGCGCTGCATAGTATCGAGAAGACGGCTCAAAAATTAGGTCTcggtggtgagcagaaaactCGGGGGAAAATGGAGGTGTATCTTCAGAAATTTCGCCCAGATCACTACGCAGAGCTTCTTAAAGCTCATATACTGTGATATAATTGTAactaacaaatattttattcattaataataatgaaaaaaatgaatatatgcctgtaataatgtgtaaatctGCAAAGTTTGATCACAAATAAACCAATATCTGCAGCCAGACAGTATATACTGTAGAGCTGAGGGAGTCTGTGGGGAAAATTTAGCAGATTTGAGGgaagttttaaaaatttttctttttcaaaatattaattgaatGTATTCATAATGATGCCAAAATTTCCAGTTaacatatttcattaaatatcaTATAAACGCATTTGAAATCACGATACAGCTTCCCCAGAAGTCTCTGTTAGTGAGCGATGGATATGGGGACCTTAAAGTTTctgaaagcttgtcagaaaaCCAAATAGTGggtgtttaaataaatattataggttaataaatgaaa

Function

symbol description
thtpa Enables thiamin-triphosphatase activity. Predicted to be involved in dephosphorylation and thiamine diphosphate metabolic process. Predicted to act upstream of or within thiamine metabolic process. Predicted to be located in cytoplasm. Orthologous to human THTPA (thiamine triphosphatase).

NR:

description
thiamine-triphosphatase isoform X2

GO:

id name namespace
GO:0050333 thiamin-triphosphatase activity molecular_function

KEGG:

id description
K05307 THTPA; thiamine-triphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937932.2 True 1167 mRNA 0.40 4 14536562 14540764

Neighbor

gene id symbol gene type direction distance location
gdap1 gdap1,LOC107693809,LOC107589927 coding downstream 53717 14475937 ~ 14482845 (-)
pi15a pi15a,LOC108256124,LOC107758808,LOC107589991,LOC107657806,LOC107689437,LOC107706855 coding downstream 107192 14419894 ~ 14429370 (-)
dok6 dok6,LOC107657792,LOC107596042,LOC107741641,LOC107589921,LOC107689434,LOC107727392 coding downstream 163109 14313082 ~ 14373453 (-)
LOC113541290 socs6,LOC107689432,LOC107596044,LOC107727394 coding downstream 313251 14217138 ~ 14223311 (-)
fbxo15 fbxo15 coding downstream 568210 13954557 ~ 13968352 (-)
ngdn ngdn coding upstream 38021 14578785 ~ 14586869 (-)
prdm14 prdm14,LOC107683184 coding upstream 77279 14618043 ~ 14629435 (-)
ncoa2 ncoa2 coding upstream 94922 14635686 ~ 14695608 (-)
tram1 tram1,LOC107657822 coding upstream 161260 14702024 ~ 14710822 (-)
terf1 terf1 coding upstream 404895 14945659 ~ 14954679 (-)
G332169 NA non-coding downstream 13947 14513735 ~ 14522615 (-)
G332056 NA non-coding downstream 69949 14466394 ~ 14466613 (-)
G331569 mtrr non-coding downstream 1122751 13412902 ~ 13413811 (-)
G331568 NA non-coding downstream 1129104 13406386 ~ 13407458 (-)
G331565 NA non-coding downstream 1154127 13380609 ~ 13382435 (-)
G332164 NA non-coding upstream 3268 14544032 ~ 14634926 (-)
G332196 NA non-coding upstream 173453 14714217 ~ 14797198 (-)
G332580 NA non-coding upstream 804508 15345272 ~ 15397132 (-)
G332637 NA non-coding upstream 1025423 15566187 ~ 15566646 (-)
G332676 NA non-coding upstream 1079742 15620506 ~ 15620717 (-)
LOC113541105 NA other downstream 773947 13757658 ~ 13762615 (-)
LOC113541288 NA other downstream 1858624 12676545 ~ 12677938 (-)
cdv3 cdv3 other downstream 2539862 11944054 ~ 11996700 (-)
G330379 NA other downstream 3453411 11082268 ~ 11083151 (-)
ackr4b ackr4 other downstream 3605787 10923126 ~ 10930775 (-)
LOC113541102 msc other upstream 392231 14932995 ~ 14937404 (-)
LOC113541115 kcnb2,si:dkey-192j17.1,LOC107657825,LOC107560266,LOC108426548,LOC107754205,LOC107589933 other upstream 422073 14962837 ~ 15065810 (-)
sec61g NA other upstream 1074734 15615498 ~ 15618842 (-)
cpa6 cpa6,LOC106579545 other upstream 1740507 16281271 ~ 16312916 (-)
oxsr1b oxsr1,oxsr1b other upstream 2289026 16829790 ~ 16879884 (-)

Expression


Co-expression Network