LOC113541169 (klhl34)


Basic Information

Item Value
gene id LOC113541169
gene name klhl34
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 19884047 ~ 19887557 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937999.2
TTGGTTGTCTGTCCAGACTCGTAATCCTGAAGTGTTTGGGGGCCGTCCACTGGCTGAAAAAGAGATCCATCCTATTGGCATGTTTATCTGCAGCAGCAATGAGCTACACCATCCCAGTAGCTGCCCTTATGAAGAGCAACACTCACTTCACTCAATTTGTGCCAGTCAAGGGGACTACTAACTTCCTCTCTCTTCCCCCATTTCCCTTCCTGTCTTCCCTTTGCTTTAACTTTCTCTTAATTTTCTTAATCTTCTCTGTTAGTAATGAGTTACTTTCTTATGCTCAGCAAGTCTCATGGCGAAGGGCTGCTCTCTCGATACCAGAGCTTGCGGCAAGATGGTCGAATGTGCGACATCATTTTGGAAGCTCAAGGCAAGGAGTTCCCAGCTCACCGCACCTTGTTAGCCTGCTCCAGTGACTACTTTTGGTCACTATTCCAAGAGCACACTTTGGAGTCAAGGGCTCGGACTGTCAGTCTACCAGCCGTGTCCTCAACTGGCCTGGAACTGGTCCTGGACTTCATCTACACCTCATGGATCTCATTATCTCCGTCCACTTTGGAGGACACACTGCAAGCTTCCTGCTACCTTCAGGTTACCCATGCTTTGGATCTCTGCACTGAATACATCTCAAACAGTCTCACTCTGGATAACTGCTGCTTTTTTGCCAATGTGGCTGCCCGTTACAGCCTCTCTGATGCACTTGCTGTCACCAGTCGTTTTATTGCAAGGCACATGGCAGGACTCCTGGGTGCCAGTGGTGACAGATCTGGGCTGCTAGAGCTAAACCTTGACTCTTTTCGAGAGGTGTTGGGATCAGATGAGATACCAGGGGTAAAGGAGACAGCACTGCTCCAGCTAGCTCTGGACTGGTTGTCCTGCAACCCTTTACCTGCCTTGGAAAGTAACTCTTTACTCAGTCGTGTTCGATTTGGCCTGGTGCCTCCAGAAGATCTGAACCATATGAGTTCCCTCAACCTACCCCTACGCACTCCTTTCATTCACAGCTTGGTACAGAAAGCCCTGCATTACCACATGCAGGTTCCCCTCCAGCCACTAATCCAGAATGTCCATACAAGTTTGAGAGCCACAACCAACATGGTACTCCTGGTAGGAGGAGGTGCTGAAGCAGAACGACCACAGACCCAAATCCAGAGCTACAATCAAGAGAGCAGGAAGTTCCATGTGCTGCCCATTAACATGGTAAAGAAGCTCCAGTATCAAGGAGTTTGTGTGGTGGGAAACTTCCTCTTTGTGCTTGGAGGAGAGGTTGTAGAGGTGGATGGGGAGAGTGAGAAGACAGCAGTGATGACGGTGTCTGACCAAGTGTGGCGCTATGACCCTCGGTTTGAACGCTGGGAGGAGATGGAGCCACTCTTACAAAAAAGGGCACAGTTCTCCTGCTGTGTGGTGGAGGGTGTAATCTATGCCATAGGAGGACGAGGCCAGAGAGGAGAGCCTACTCTGTCCTCTGTGGAAAGATACAACATGAGTGCAGGGTGCTGGCGTAGTGGCGTGTCCTTGCCCCATGCTATCCATGGACAAGCTTGTGCCACCATCGGCAGAGGTATCTACATTTCTGGCGGCATCCATGGCAGCCAGCCTGAGAGTAGCAAGGAAGTGTTGTTTCTTAACACCTCTGATGATGATGTCTGGATAAGACGTTCTTCTATGTCTATTGCTAGATTTGGCCATCAGATGGCAGCCATAAAGGAAAAACTCTATGCATTCTTAGGGATGTATGAACCATTTTGTGACATCGAGTGCTATGACCCTAAACAAAATCAGTGGACCCGACTGAAACCTCTTCTGCAAGACCGCTTCTGCTATGGTTTGACAGTCACACCAGGCGGATGCGCATTGATGTTTGGAGGTAGAAAGTGGCAAGATGGACAGGAAGTGTGCATTCATGATGTCCTGGAGTACAACCCTGAATATGACAGCTGGAGGAAAGTGTGTAAGCTGCCACATCCATTATGTGGGACACAATGTGCTCAGATGAGTCTCCAAGAACTTATAGAGAGATAGGTACCCCCCAAAATCCTCCAACTTCCATATACACGCAGAGAACTTCCACAGCCTGAGTAGAAAAGGAGAAGATTGTTCAGTCAGTGCATACTTGGTAGCCTTGTAGAGGGTAAATCTCACTGATCTATGCAGGCAGAATGGATTTTGACCTTCAGGACAGTGAATCAGAAGAATCTTGGCACTGGAGGCACTGTATTGCAAAGGATAAACAAAGCATGACAGCAATGGGAGGTCATACTGACAGCACAAAAAAGACAAGAGCTCCGGGAGTTCTGGGGTTGTCCTATTTCCAGAAAATAAGATTGCATGGAAAGAAACGGACACGGATCGAACACCGTGTGAAATAACACAGTGTAAAATAAGGACTGTCTGAAGCAGGTGTATACACAGGATATTTGGCAATGGATACAGATAAGGCAGAAAGTATGaatattttcatatgaaaaatatgaaaatttatGCCAAAACTGTCAGAGAAGGGGGCTTAGGTAGATAAAAGGACATCAGAACAAAAGGAACAGAATAGATACATGAAAAAAAGGTTGAAGCATAAAATAGTATTGAGAACAAGGTATTTAAAAGCACTTTAAGTTAATTAAAggtctctgagtgtgtgtgggatgaaAATGAGAGGGGGGAAATAGATTTAGTTCTCTCAAATACAAAACACGGGTCAAAACTCAACAACTGCCTGGGCGTAGAGCGCTTTCCACTCTTCTCCATGACCTAAGTAATTAAAATTCACCAGAAAATGTTAAGTATGATATGTTGCATATCTTGCATGTGTCATTTATTTGAGTCATGTAATAAAAAGCATCTTCCTGGAGCAAAATTAGTCTAGCATACAGAACTTAATGAAAGCTATTCAGAGGTACACTAGGAAAGAGCCTGAATAAACGCGGGGAGCGTGAGATCGTCCCTGGAGCTTGCAAGTCATTTAGCGCAattcatttttgctttgttgTAATGagcttaaaataaatgaaatgattaatgAGTGGTGTTAAAAGCGAAAGGCATGAACTCGAGAGAAAGAGCGCAAGGATGTGGTAATTAACACAAAGGAGAAAGACTAGGGATGTCTGTATGCTAGGATATAGCAGATTAGCACCAGGTGgcctgagagagaaagggtgcatgtaaagaaagcagaaaaaccTTCATGGTAGCTTGGAGAGAGGCAGATAGGCAAGAAGGGTAAAATAAACACCCCGTTAGATCTGGATCTTGGATGGAGGTAGACGGATTGCCAGttctttcatttcctaataCTTTAGCTGAGCCTGTGAAGCCTGGAACTCCACTAGCTTAGCTCAGCAAAAGCATCTGGTTGTTTTCTACAAGTTATACTACAAAGACAATAAGTCAGGAATAGACcactgtgtgtcatgctgttataggaaaacaatgtgtgtaatgaaaccaccctgaagttgattagtttcctataacagcacgtctctgagtgttttattttgtccta

Function

symbol description
klhl34 Located in extracellular space.

GO: NA

KEGG:

id description
K10469 KLHL34; kelch-like protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937999.2 True 3511 mRNA 0.45 1 19884047 19887557

Neighbor

gene id symbol gene type direction distance location
LOC113541258 LOC108256477,LOC108439743,LOC107705271,LOC107721848,LOC107590344,LOC107586729,LOC107671347 coding upstream 133992 19740057 ~ 19750055 (+)
amer2 amer2 coding upstream 280277 19600565 ~ 19603770 (+)
mtmr6 mtmr6,LOC107721921,LOC107705267,LOC107590218 coding upstream 290595 19579310 ~ 19593452 (+)
pcyt1ba pcyt1b,LOC107721854,LOC107590340,LOC107586799,LOC107705205 coding upstream 377511 19498302 ~ 19506536 (+)
arxa arx,arxa,LOC107586699,LOC107663641 coding upstream 447287 19429768 ~ 19436760 (+)
sh3kbp1 sh3kbp1,LOC107590295 coding downstream 163179 20050736 ~ 20112391 (+)
map3k15 map3k15,LOC107685453 coding downstream 228457 20116014 ~ 20152049 (+)
LOC113541177 NA coding downstream 277210 20164767 ~ 20167147 (+)
tfr1b NA coding downstream 285543 20173100 ~ 20188652 (+)
tnk2a LOC108256568,LOC108440396,LOC107685449,LOC107725874 coding downstream 306503 20194060 ~ 20207270 (+)
G335243 NA non-coding upstream 59136 19824703 ~ 19824911 (+)
G335215 NA non-coding upstream 115704 19767463 ~ 19768343 (+)
G335214 NA non-coding upstream 117221 19766470 ~ 19766826 (+)
G334888 NA non-coding upstream 177041 19704685 ~ 19707006 (+)
G334806 NA non-coding upstream 294987 19561102 ~ 19589060 (+)
G335345 NA non-coding downstream 77987 19965544 ~ 20029491 (+)
G335377 NA non-coding downstream 170817 20058374 ~ 20058822 (+)
G335379 NA non-coding downstream 204266 20091823 ~ 20191789 (+)
G335381 NA non-coding downstream 287221 20174778 ~ 20189323 (+)
G335383 NA non-coding downstream 319967 20207524 ~ 20208617 (+)
smpx smpx,LOC107590224,LOC107663668,LOC107721880,LOC107705278,LOC107671350 other upstream 1211 19870381 ~ 19882836 (+)
G335231 NA other upstream 94989 19788583 ~ 19789058 (+)
cip2a kiaa1524 other upstream 180243 19636868 ~ 19703804 (+)
si:ch73-264p11.1 sh21b other upstream 200177 19678481 ~ 19683870 (+)
G334838 NA other upstream 306974 19576111 ~ 19577073 (+)
camk2n2 camk2n2,LOC108256106,LOC107590228,LOC108443638,LOC103024774,LOC107586800 other downstream 97775 19985332 ~ 19988036 (+)
ccl20b NA other downstream 272710 20160267 ~ 20163106 (+)
mynn mynn other downstream 374311 20261868 ~ 20270565 (+)
lrrc34 lrrc34 other downstream 386563 20274120 ~ 20281252 (+)
vipr2 vipr2,LOC107656837 other downstream 857192 20744749 ~ 20764373 (+)

Expression


Co-expression Network