tmprss7 (tmprss7)


Basic Information

Item Value
gene id tmprss7
gene name tmprss7
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 17831292 ~ 17842178 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938067.2
TGGACGCCATGCTCAATAAACTGCGTAGTAAATACAGCAGACGCAGAAGGAGAGCAAAGAAGGtgaagaaactgaagaagaGGCCACTGGTGAACCTGCAGAATCTGGTCCTGATTATTACAGTCGTGGTGTTTGTCATTGTGGTGATCATGTGGTCACTTCTGTGGGTTTTTACATTTCGGAGAGAAAGCAACAGTGGCGTGTACTTCGCTGGTATGTTTCGTGTCGCCAATGTGGAGTTCATACCAGAGTACCGGCATGCCGACTCCAGTGAATTTGTATCCATGGCAAATCAAATACAACATGTGGTAAGCAAAGTCTACAGATCATCATCAGtatcaaagctctacaaacacaccatcatatctgacctgagTAACAATGATAAAGGTGGTGTTCTGGTGCATTTCTGGATGATCTTCGTGGTGCCAAGGTTAAAGACtccagcagtgtgtgaggagtgtgttagtgcaaTCCTCAGAGACTCGGTGCTCACATCCCTAAAGAACAGATCCTCTGTGGGCTTCCTGTTGGGGCTGCCAGTAGACATTGACTCCATCTTCATCAACATTGCTCTTCGCTCAGATTACACATCAATCGCTGCAGGCTCTGAGTGTGTGGATAAGCTGTACGCAGGCCTCCCTGATGTGAGAGTCCCACTGAACGTTTTCTCATCTGGGGGTCTGAGCTGCCACGTCAAACTCACGTCTGCTCCGGGTTCCATCATCCGGCTCACGGTGAACAGCCTGGACATCGAGCCCAGTGACTGCACATACGATGCTCTCACTGTGTACGACGCACTGCTGCCTATGAGAGCCAAAACTTTGCACAGgttGTGTGAGGAAGTGCGGGTTCCAGTCTCTCTCGTCTCCACCTCTAACGTCATGCTGCTGTCCTTCAGACTCACGCAAGGCAACAAGAGCTTCCGAGGATTCTTCCAGGCCATTCCTGAGGAGGAGTGCCTGAGTGTAACTGAGATTCCAGCAGCTCCCAGTGAAGCAGGAGAAATGACCAGCCCGTTTTACCCCAGTCTTCTCCCCCCGCTGTGCTCCTGCACCTGGAGGCTTCAGACCCCCAGCACTTCTCTCGGTGTGGCTCTGAAGTTTCAGAACTACATCCTGTCACCGAAAGACCTGACTCCGTGTGAACACGGATGGTGGAAGGTCAATGAGATCATATACTGCGGCCGCTACGTGAGTCATGCAACCGTCTTCCGTATTCCTGAGAGAAGTGCAGAGGTGGTGTTTCGCTGCAGCTCCCGCAGCTCCGAGCTGCCTTTCAGTGCCACCTACAGCAGCTTCAACATCAGCCAACcgtGTCCTGAGGGTCACTTCCTGTGCGCCACGGGGTTGTGTGTGGAAAAGGAACGACGCTGTGATGGCCTGGATGACTGTCAGGATGAGAGCGATGAGGTCTTCTGTGCAAAACCCTTTAAAAACTGCGGCAGCCAGACTTCTCTTCATCCTCTTTATGTATGCGATGGAGAGAATGATTGTCCCAATGGACGAGATGAAAGCAACTGTACTCAAGAGACGGGCTGCTCTGGGATGTGGTATCAGTGCAGCAATGGAGCATGTATcctaaagaaaaatgcaaagtgTGATGGATTTCATGACTGTCTCGACCACAGCGATGAGAAGGACTGTGCCTGTGGTCAGTCCATGCCTGTGAAACGTGTGATGGACAGCACAGCTCCTCAGGAGCGAGTGGTGGGTGGGGTCAACGCTGTAGAAGGGGAGTGGCCATGGCAGGTCAGTTTGCATTTCTCTGGCCATCTGTACTGTGGCGCCTCCGTTATCACCAGCGAGTGGCTCATCTCTGCTGCACACTGCTTCAGCAAAGAGAGACTGTCAGACTCTCGCCAGTGGATGGCTCACCTGGGCATGTTGACTCAGGGCAGTGCTAAGCACGTGGCAGAAATCCGCCGCATTGTGGTGCATGAGTACTACAATGCTCGTAACTTTGACTACGACATCGCCCTGCTGCAGCTCAGAAAGGCGTGGCCCAGCAGCCTGGCCCCCTTTATCCAGCCTGTGTGCCTGCCCGCCCCATCACAGACCCTCACCGAGAGACACCGCTGCTGGGTGACGGGCTGGGGCTACCGCTCCGAACAGGATAAGGTCCTACCCACGGTGCTGCAGAAGGCTGAGGTAAACGTCCTGAGTCAGAGTGAGTGTAAGAGGGCATACGGTCCTGTCTCTCCCCGCATGCTGTGTGCTGGAGTACCCAGTGGAGAGCGAGATGCCTGCCGCGGGGACTCAGGTGGTCCTCTGTCGTGCCAGGCTTCGGAAGGTGGACGCTGGTTTCTGACAGGAATCGTAAGCTGGGGGTCGGGCTGCGCCAGACCTAATTTTCCCGGAGTGTACACCAGGGTGGCCAAGTTCATCTACTGGATCAACAGCCACATTTACAACTCATGATTAACCTACAACACTCAGAGCCAAGCATCATAACCTCCATTCAGTGATATAAAGTTTGAACCTCAGTATCCATGAACAGACCTCAGAATAATCACAGCCATCATTAGATGATTAGAGCAGattgtgtgcagatgtgtgaTTGTCTAGTGTGATTCAAAGTCTGTAACACTT

Function

symbol description
tmprss7 Orthologous to human TMPRSS7 (transmembrane serine protease 7).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K09638 TMPRSS7; transmembrane protease serine 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938067.2 True 2591 mRNA 0.52 18 17831292 17842178

Neighbor

gene id symbol gene type direction distance location
LOC113541118 LOC108256139,LOC108442190 coding downstream 3013 17815640 ~ 17828279 (-)
flt1 flt1 coding downstream 20997 17784153 ~ 17810295 (-)
flt3 flt3 coding downstream 71299 17743332 ~ 17759993 (-)
naa50 naa50,LOC106579447 coding downstream 104884 17720105 ~ 17726408 (-)
LOC113541196 usf3 coding downstream 112036 17706992 ~ 17719256 (-)
spata13 LOC108256577 coding upstream 7588 17849766 ~ 17874941 (-)
c1qtnf9 LOC108256147,LOC108442199 coding upstream 34536 17876714 ~ 17879197 (-)
tagln3b tagln3,tagln3b,LOC108442189,LOC107701685,LOC107705223,LOC107654214 coding upstream 37832 17880010 ~ 17883333 (-)
abhd10b abhd10b,LOC108256739,LOC108442198,LOC107716420,LOC107705222,LOC107591218,LOC107654210,LOC107701684 coding upstream 43370 17885548 ~ 17889762 (-)
LOC113541342 acot9,acot9.1,LOC107705219,LOC107654207 coding upstream 48172 17890350 ~ 17899678 (-)
G333700 NA non-coding downstream 288940 17541846 ~ 17542352 (-)
G333657 NA non-coding downstream 441179 17389862 ~ 17390113 (-)
G333656 NA non-coding downstream 441551 17389454 ~ 17389741 (-)
G333653 ccdc191 non-coding downstream 445646 17385279 ~ 17385646 (-)
G333652 NA non-coding downstream 447269 17383742 ~ 17384023 (-)
G333932 NA non-coding upstream 57661 17899839 ~ 17902383 (-)
G333934 NA non-coding upstream 60455 17902633 ~ 17902855 (-)
G333939 NA non-coding upstream 63730 17905908 ~ 17906806 (-)
G333971 NA non-coding upstream 82313 17924491 ~ 17924789 (-)
G334038 NA non-coding upstream 186397 18028575 ~ 18028834 (-)
vipr1b vipr1,vipr1b,LOC108256372,LOC107733233,LOC107754936 other downstream 592176 17185524 ~ 17239116 (-)
zbtb47b zbtb47,znf652,LOC108256615 other downstream 691607 17116098 ~ 17139685 (-)
myd88 myd88 other downstream 941868 16885151 ~ 16889424 (-)
oxsr1b oxsr1,oxsr1b other downstream 951408 16829790 ~ 16879884 (-)
cpa6 cpa6,LOC106579545 other downstream 1518376 16281271 ~ 16312916 (-)
LOC113541127 LOC108256571 other upstream 65406 17907584 ~ 17908812 (-)
c22h11orf65 c23h11orf65 other upstream 67146 17909324 ~ 17916556 (-)
zmp:0000000991 NA other upstream 73906 17916084 ~ 17931814 (-)
mybl1 mybl1,LOC107663687,LOC107590196 other upstream 595336 18437514 ~ 18520205 (-)
pkia pkia,LOC107666628,LOC107705234 other upstream 1163320 19005498 ~ 19015855 (-)

Expression


Co-expression Network