sgk3 (sgk3,LOC107721888,LOC107663688,LOC107666631,LOC107705243,LOC107590197)


Basic Information

Item Value
gene id sgk3
gene name sgk3,LOC107721888,LOC107663688,LOC107666631,LOC107705243,LOC107590197
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 18453107 ~ 18467245 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938083.2
GAATATCCTCATTGCAGTTTGGTCCCGTGACAAATAGCTTCCGAACTTCAGGAAAAACGTCAGTAAACTTTCTGGATAACTTTACTTGGCAGTTCCTTCACAAAACAGACATTATGGATAGTGGAAAGCGCAGCTTCAGCTCGGTTATCAGTGGAAAAGTTTGAGAGTCTTCACACACTGAAGTTTGGATTTTTGTTTTGAACTTCCTCTGCTGGACTCTGGTGCTCTTTCCGGGGAAACTTGGTTAAAAGCTCAAGAATGGATTGCCAGTTGTGTCTTTGAGCCGTGCTCCAGAACGGAGCACTAAGGAATCGCTGTTACACAGAGCCGCCTTCACTGAGCCCGGTCAGGAAGAACGATCAGGATGGACGCGCATTCAAGTTGCCCTAATGTCAGCATTCCCTGCTACAATGAGCAGAGAGACAAGAAAAAACGTTATACTGTTTACAAAGTGATGGTCAGAGTTGGAAGACATGAGTGGTTTGTCTTCAGGAGATATGCAGAATTTGATAAACTGTATAATACATTGAGAAAACAGTATCCTGCTTTGAATTTGAAGATACCTGCTAAGAGAATATTTGGTGACAACTTTGACCCAGAGTTTATAAAGCAAAGAAGAACGGGGTTACATGGGTTCATTCAGAAAATCGTGTCCCATCCACAGCTCAGCAATCACCCTGACGTTCGAGACTTTCTCCAAATGGACAAATCCCAAAATGTCTCCGATGCTTCAGATGATGAATATGAGAAGAACAACTCTGCCTCCAGAGATATTAACCTGGGACCATCTGCAAACCCTCAGGCAAAACCCACTGACTTCGACTTTCTGAAAGTCATCGGTAAAGGGAGCTTTGGAAagGTTCTCCTTGCAAAGAGGAAACGAGATGGGAAGTGTTATGCAATCAAAGTCCTTcagaaaaaagtcattttaaaaaggaGGGAGcaaaaacacaTCATGGCCGAGCGCAATGTGCTGCTAAAAAACGTGAAGCACCCTTTTCTAGTCGGATTGCACTATTCCTTCCAGACAACGGATAAGTTATACTTTGTCCTGGATTTTGTCAACGGTGGAGAACTTTTCTTTCACCTTCAAAAAGAGCGAACCTTTCCGGAGCCCAGGGCGAGGTTCTACATCGCTGAGATGGCGAGCGCACTGGGCTATCTACACTCTCTCAACATTGTTTACAGggATTTGAAACCGGAAAATATCCTGTTGGACTTCGAAGGACACGTAGTCTTGACGGATTTTGGACTGTGCAAAGAGGGGATCTCTCAAGCAGACACGACCACCACATTTTGCGGGACACCTGAGtaTCTGGCTCCAGAGGTCTTGAGAAAACAGCCCTATGACAACACTGTGGATTGGTGGTGTCTCGGTTCTGTATTATATGAGATGCTCTATGGcctgCCTCCATTCTACAGTAGGGACACGCATGAAATGTATGATAACATCCTGCATAAGGAGCTGCCAATGCGCCTAGGGGCATCCACGGTCGCCTGGTCCATTTTACAGGCTCTTCTGGAGAAAGACAACACCAGGAGGCTGGGATACAAAGACGACTTTAATGAAGTTAAAAGCCATGTATTTTTTGCTTCCATTAACTGGGACGACCTTGTGCAGAAAAGGATCCCACCTCCATTTAATCCCAGTGTGGAGTCCCAGTATGACTTATCAAATTTTGATCCTGAGTTCACAGAAGAAACCGTACCCAACTCAGTGTGCATCTGCAAGGATAACTCCATTGTCAACGCCAGTGTCATGGAGGCTGACGATGCTTTTCTGGGCTTTTCCTATGCTCCACCTTCAGATGACTCCTTCCTGTAAAATTTCTTAAGAACTGTACTGCAGCTATTTTATGCTACCAGAAATGGCTTGGGTGTGCTCTTTCATTCAGAAAGCGACGAAAATGCAAAGACCAAACCAAGGCATTGTACACTTGATAAAAGGACAGATATCTTGTGATGCGGggttttccaattttttttattttttaacctcTCAACAacagatttatattttgtattgtataaaTGCGTATACCTGAGATACTGTTATAGCTCAGGTATTCTATTTTCTCTTCCCTAGATTATTTTCTACAGTGGTAGTTGTTGTGTCAGGGAAGCCGGGTAATGAATTTTGAAACCAGATATATACATTCCACATTTAAATACCCCCTAATGAACTTTATTGTTCGTGGCACTTGTGATTGTTTGGTTTGTCCTCCTTTGAAAAATGTCTTAGTAGGATAGTTTAGAaggcctttttttccccagagaaTTTGcaagatatcttttttttttcttttcttttcttttttttttaaccaaagataatgtgttttgtaataacataaaaatggaaaactgAAGTAAATTGTGTAACTGTAATTTAAATTAGTAAACTGTGGATGTATGAACCAA
>XM_026938084.2
CTTTCTAACTATCTGCTCGCAGAGTTcagtgtgaaagtgtcagaAGTGTAGAAATGTAAAGGCATAGTGAAATGTGTTCATTATTAAACATGTGCTCGTTTTTGAGTTCCTTTAGGAACATTAGCTCAAGAATGGATTGCCAGTTGTGTCTTTGAGCCGTGCTCCAGAACGGAGCACTAAGGAATCGCTGTTACACAGAGCCGCCTTCACTGAGCCCGGTCAGGAAGAACGATCAGGATGGACGCGCATTCAAGTTGCCCTAATGTCAGCATTCCCTGCTACAATGAGCAGAGAGACAAGAAAAAACGTTATACTGTTTACAAAGTGATGGTCAGAGTTGGAAGACATGAGTGGTTTGTCTTCAGGAGATATGCAGAATTTGATAAACTGTATAATACATTGAGAAAACAGTATCCTGCTTTGAATTTGAAGATACCTGCTAAGAGAATATTTGGTGACAACTTTGACCCAGAGTTTATAAAGCAAAGAAGAACGGGGTTACATGGGTTCATTCAGAAAATCGTGTCCCATCCACAGCTCAGCAATCACCCTGACGTTCGAGACTTTCTCCAAATGGACAAATCCCAAAATGTCTCCGATGCTTCAGATGATGAATATGAGAAGAACAACTCTGCCTCCAGAGATATTAACCTGGGACCATCTGCAAACCCTCAGGCAAAACCCACTGACTTCGACTTTCTGAAAGTCATCGGTAAAGGGAGCTTTGGAAagGTTCTCCTTGCAAAGAGGAAACGAGATGGGAAGTGTTATGCAATCAAAGTCCTTcagaaaaaagtcattttaaaaaggaGGGAGcaaaaacacaTCATGGCCGAGCGCAATGTGCTGCTAAAAAACGTGAAGCACCCTTTTCTAGTCGGATTGCACTATTCCTTCCAGACAACGGATAAGTTATACTTTGTCCTGGATTTTGTCAACGGTGGAGAACTTTTCTTTCACCTTCAAAAAGAGCGAACCTTTCCGGAGCCCAGGGCGAGGTTCTACATCGCTGAGATGGCGAGCGCACTGGGCTATCTACACTCTCTCAACATTGTTTACAGggATTTGAAACCGGAAAATATCCTGTTGGACTTCGAAGGACACGTAGTCTTGACGGATTTTGGACTGTGCAAAGAGGGGATCTCTCAAGCAGACACGACCACCACATTTTGCGGGACACCTGAGtaTCTGGCTCCAGAGGTCTTGAGAAAACAGCCCTATGACAACACTGTGGATTGGTGGTGTCTCGGTTCTGTATTATATGAGATGCTCTATGGcctgCCTCCATTCTACAGTAGGGACACGCATGAAATGTATGATAACATCCTGCATAAGGAGCTGCCAATGCGCCTAGGGGCATCCACGGTCGCCTGGTCCATTTTACAGGCTCTTCTGGAGAAAGACAACACCAGGAGGCTGGGATACAAAGACGACTTTAATGAAGTTAAAAGCCATGTATTTTTTGCTTCCATTAACTGGGACGACCTTGTGCAGAAAAGGATCCCACCTCCATTTAATCCCAGTGTGGAGTCCCAGTATGACTTATCAAATTTTGATCCTGAGTTCACAGAAGAAACCGTACCCAACTCAGTGTGCATCTGCAAGGATAACTCCATTGTCAACGCCAGTGTCATGGAGGCTGACGATGCTTTTCTGGGCTTTTCCTATGCTCCACCTTCAGATGACTCCTTCCTGTAAAATTTCTTAAGAACTGTACTGCAGCTATTTTATGCTACCAGAAATGGCTTGGGTGTGCTCTTTCATTCAGAAAGCGACGAAAATGCAAAGACCAAACCAAGGCATTGTACACTTGATAAAAGGACAGATATCTTGTGATGCGGggttttccaattttttttattttttaacctcTCAACAacagatttatattttgtattgtataaaTGCGTATACCTGAGATACTGTTATAGCTCAGGTATTCTATTTTCTCTTCCCTAGATTATTTTCTACAGTGGTAGTTGTTGTGTCAGGGAAGCCGGGTAATGAATTTTGAAACCAGATATATACATTCCACATTTAAATACCCCCTAATGAACTTTATTGTTCGTGGCACTTGTGATTGTTTGGTTTGTCCTCCTTTGAAAAATGTCTTAGTAGGATAGTTTAGAaggcctttttttccccagagaaTTTGcaagatatcttttttttttcttttcttttcttttttttttaaccaaagataatgtgttttgtaataacataaaaatggaaaactgAAGTAAATTGTGTAACTGTAATTTAAATTAGTAAACTGTGGATGTATGAACCAA
>XM_026938085.2
TGTTTAAGTCGCTTGACCTAGAACAGACGTCGGATTGTGTGCTCTGCTTCCTGATAGAGGAGCCCCAGAAAAAAGGACCTGAGAATCCTTCTACCTTAGATAGCCATTAAATCAGATAGCTCAAGAATGGATTGCCAGTTGTGTCTTTGAGCCGTGCTCCAGAACGGAGCACTAAGGAATCGCTGTTACACAGAGCCGCCTTCACTGAGCCCGGTCAGGAAGAACGATCAGGATGGACGCGCATTCAAGTTGCCCTAATGTCAGCATTCCCTGCTACAATGAGCAGAGAGACAAGAAAAAACGTTATACTGTTTACAAAGTGATGGTCAGAGTTGGAAGACATGAGTGGTTTGTCTTCAGGAGATATGCAGAATTTGATAAACTGTATAATACATTGAGAAAACAGTATCCTGCTTTGAATTTGAAGATACCTGCTAAGAGAATATTTGGTGACAACTTTGACCCAGAGTTTATAAAGCAAAGAAGAACGGGGTTACATGGGTTCATTCAGAAAATCGTGTCCCATCCACAGCTCAGCAATCACCCTGACGTTCGAGACTTTCTCCAAATGGACAAATCCCAAAATGTCTCCGATGCTTCAGATGATGAATATGAGAAGAACAACTCTGCCTCCAGAGATATTAACCTGGGACCATCTGCAAACCCTCAGGCAAAACCCACTGACTTCGACTTTCTGAAAGTCATCGGTAAAGGGAGCTTTGGAAagGTTCTCCTTGCAAAGAGGAAACGAGATGGGAAGTGTTATGCAATCAAAGTCCTTcagaaaaaagtcattttaaaaaggaGGGAGcaaaaacacaTCATGGCCGAGCGCAATGTGCTGCTAAAAAACGTGAAGCACCCTTTTCTAGTCGGATTGCACTATTCCTTCCAGACAACGGATAAGTTATACTTTGTCCTGGATTTTGTCAACGGTGGAGAACTTTTCTTTCACCTTCAAAAAGAGCGAACCTTTCCGGAGCCCAGGGCGAGGTTCTACATCGCTGAGATGGCGAGCGCACTGGGCTATCTACACTCTCTCAACATTGTTTACAGggATTTGAAACCGGAAAATATCCTGTTGGACTTCGAAGGACACGTAGTCTTGACGGATTTTGGACTGTGCAAAGAGGGGATCTCTCAAGCAGACACGACCACCACATTTTGCGGGACACCTGAGtaTCTGGCTCCAGAGGTCTTGAGAAAACAGCCCTATGACAACACTGTGGATTGGTGGTGTCTCGGTTCTGTATTATATGAGATGCTCTATGGcctgCCTCCATTCTACAGTAGGGACACGCATGAAATGTATGATAACATCCTGCATAAGGAGCTGCCAATGCGCCTAGGGGCATCCACGGTCGCCTGGTCCATTTTACAGGCTCTTCTGGAGAAAGACAACACCAGGAGGCTGGGATACAAAGACGACTTTAATGAAGTTAAAAGCCATGTATTTTTTGCTTCCATTAACTGGGACGACCTTGTGCAGAAAAGGATCCCACCTCCATTTAATCCCAGTGTGGAGTCCCAGTATGACTTATCAAATTTTGATCCTGAGTTCACAGAAGAAACCGTACCCAACTCAGTGTGCATCTGCAAGGATAACTCCATTGTCAACGCCAGTGTCATGGAGGCTGACGATGCTTTTCTGGGCTTTTCCTATGCTCCACCTTCAGATGACTCCTTCCTGTAAAATTTCTTAAGAACTGTACTGCAGCTATTTTATGCTACCAGAAATGGCTTGGGTGTGCTCTTTCATTCAGAAAGCGACGAAAATGCAAAGACCAAACCAAGGCATTGTACACTTGATAAAAGGACAGATATCTTGTGATGCGGggttttccaattttttttattttttaacctcTCAACAacagatttatattttgtattgtataaaTGCGTATACCTGAGATACTGTTATAGCTCAGGTATTCTATTTTCTCTTCCCTAGATTATTTTCTACAGTGGTAGTTGTTGTGTCAGGGAAGCCGGGTAATGAATTTTGAAACCAGATATATACATTCCACATTTAAATACCCCCTAATGAACTTTATTGTTCGTGGCACTTGTGATTGTTTGGTTTGTCCTCCTTTGAAAAATGTCTTAGTAGGATAGTTTAGAaggcctttttttccccagagaaTTTGcaagatatcttttttttttcttttcttttcttttttttttaaccaaagataatgtgttttgtaataacataaaaatggaaaactgAAGTAAATTGTGTAACTGTAATTTAAATTAGTAAACTGTGGATGTATGAACCAA

Function

symbol description
sgk3 Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to several human genes including C8orf44-SGK3 (C8orf44-SGK3 readthrough).

NR:

description
serine/threonine-protein kinase Sgk3-like isoform X2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007154 cell communication biological_process
GO:0005524 ATP binding molecular_function
GO:0035091 phosphatidylinositol binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K13304 SGK3; serum/glucocorticoid-regulated kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938083.2 True 2421 mRNA 0.42 17 18453107 18467245
XM_026938084.2 False 2294 mRNA 0.42 17 18453386 18467245
XM_026938085.2 False 2289 mRNA 0.42 17 18454589 18467245

Neighbor

gene id symbol gene type direction distance location
si:dkey-97a13.12 NA coding upstream 20957 18396227 ~ 18432150 (+)
rrs1 rrs1,LOC107590198,LOC107721889 coding upstream 29547 18420986 ~ 18423560 (+)
trim55b trim55,LOC107590338,LOC107663638 coding upstream 62242 18380291 ~ 18390865 (+)
trnaa-agc_16 NA coding upstream 73093 18379942 ~ 18380014 (+)
trnaa-agc_15 NA coding upstream 73733 18379302 ~ 18379374 (+)
pign pign,LOC107663715,LOC107721925,LOC107666639,LOC107705240 coding downstream 36573 18503818 ~ 18523294 (+)
LOC113541230 NA coding downstream 55909 18523154 ~ 18527695 (+)
hnf4g hnf4g,LOC107586790,LOC107666612 coding downstream 63230 18530475 ~ 18542760 (+)
zfhx4 zfhx4,LOC107666618,LOC107721891,LOC107705239,LOC107590192 coding downstream 265715 18732960 ~ 18788585 (+)
LOC113541280 LOC108256606 coding downstream 348989 18816234 ~ 18931272 (+)
G334211 mybl1 non-coding upstream 12451 18440255 ~ 18440656 (+)
G334210 NA non-coding upstream 13661 18439149 ~ 18439446 (+)
G334209 NA non-coding upstream 15701 18435721 ~ 18437406 (+)
G334120 NA non-coding upstream 128222 18296643 ~ 18324885 (+)
G334077 NA non-coding upstream 249427 18203063 ~ 18203680 (+)
G334219 NA non-coding downstream 33538 18500783 ~ 18530907 (+)
LOC113541128 NA non-coding downstream 76117 18543362 ~ 18681823 (+)
G334345 NA non-coding downstream 211630 18678875 ~ 18738178 (+)
G334371 NA non-coding downstream 221514 18688759 ~ 18726730 (+)
LOC117595807 NA non-coding downstream 238047 18705292 ~ 18706093 (+)
mtfr1 mtfr1 other upstream 129812 18315354 ~ 18323295 (+)
G333943 LOC108256468 other upstream 460093 17986762 ~ 17993014 (+)
pan3 pan3,LOC107705213 other upstream 656586 17761531 ~ 17796521 (+)
rnf6 rnf6,LOC106590444 other upstream 910720 17535944 ~ 17542387 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other upstream 1151103 17285082 ~ 17302004 (+)
mcmdc2 mcmdc2 other downstream 633 18467878 ~ 18486009 (+)
G334373 NA other downstream 225904 18693149 ~ 18717953 (+)
LOC117595806 zfhx4,LOC107590192 other downstream 244803 18712048 ~ 18747477 (+)
dap dap,LOC107705232,LOC107701690,LOC107654217 other downstream 850612 19317857 ~ 19427936 (+)
G334838 NA other downstream 1108866 19576111 ~ 19577073 (+)

Expression


Co-expression Network