boc (boc)


Basic Information

Item Value
gene id boc
gene name boc
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 17678898 ~ 17706118 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938144.2
AGAATTGTGTGAGAGCTCAGTCATCCAAAAACGGCCTTTCAATGGGACAAGTTTGGGGGAGCCGAGGAAAATGTCGGTCCCACCGCAGTAAATTACTAAACTAGCTCAGCGCTTTAGAGGGTGGGAAAAAAGGCTAAAGAAACAGTcttacttctttttctttttggtttggGATTAAATTCTGCACGAAGTTGTTGGGAAAAACCTTCACACTCCAGAGAAAAAACAGCTTCATCTCCAGCACTCGTTTTTTTGAGGTGGTATATGGAAGATGTCGAGAATGGCGGACTGGATAGCATGGCATCGGAGGCTTCAGCTGCTTTGTGCTCTGTGCTCAGCTCTTCTGTGCTGTCTGCAGGTTGCTTCTGCTCTCAATGACGATGATGTCCCAGTGTTCATGGAGGAGCCGCTGTCCGTGGTGCAGAAACTTGGGGGCAGCGTGACCCTGCGGTGCAGTGCCCGACCCGCTCAGGCCCGTATCAGCTGGCGCCTGAATGGCCGTGAGCTGTTCGGTAACGGTGATGAGGCCAAGCTGGGTGTGGTGATGCAGTCGGACGCACTCTTTATCCCCTCCCTCTCTAACAGCACGCTGGGACGATACCAGTGTGTGGCCAGCACCAGTGCCGGAGCACGAGCCAGCATGCCTGCAAACGTCACTGCAGCCAagctgcGAGACTTTGAGCCTGATGACCAGCAGGAGATTGAGGTGGATGAAGGGAACACAGCGGTGATCGAGTGTCACCTACCTGAGAGCCAGCCCCAGGCGCAGGTCCGCTACAGCGTCAAGCAGGAGTGGCTCGAAACATCTAAAGGGAATTACCTCATCATGCCATCGGGGAACCTGCAGATCGCCAACGCCACCCAGGAGGACGAGGGGCCTTACAAATGTGCTGCCTACAATCCAGTCACCCAGGAGATCAAGACCTCCACCTCTACTGACCGCCTGCGCATACGCCGTTCGACGTCCGAGGCAGCGAGGATCATCTACCCGCCGGCATCCCGCACCATGACGGTGCGTAAAGGCCACAGGCTGGTTCTGGAGTGTGTAGCCAGCGGCACCCCGACACCTCAGGTCACCTGGGCGAAAGACGGTCGAGAATTAAGCCCTCAAAACAACACTCGCTTCCTGCTCAGCAACCTGCTGATTGACACCGTGAGTGACAGAGACTCGGGCACGTACGCCTGCCACGCCCACAACGGCATGGGCTCTCCTGGCACAGCAACCATTCTCTACGATGTCCAAGTGATCGAGCCCCCTCAGGTGCGGGTGGAGCTGCTGCAGCAGGAGCCAGCGTGGGGCGACACAGTGAGGTTCAGCTGTCAGGTTCGGGGAAATCCGGCACCCAGCGTGGTTTGGCTCCATAACGCTCAACCAATCACTCCATCATCACGTCACCGCCTCTCCTCACACCTGCTGCGTGTCCTCAGCGTGGGCCCGCAGGATGACGGAGTTTACCAGTGCATGGCTGAGAACTGGGTGGGCGGAGCCCAGGATGCCACACGACTCTTCACTGTGCCTGCTGCGCCCTCGCGGCCAGGTCGACTGCCCCTCATTCGGCCGCTGAGCCCTGACCAAGTTCTGCGAGAGCTGCCTCCTGCTCGGCCAATGGCTCCCAGCACAGAGCTTTTCATCGACTGTTCAGAGATCCCCGGGAACGTGTCGCCAGCCGAGGCGCCGGTCATCCTCAGCCAGCCCCGCACAGGCACGGCCGACTTCTACGAGCTCATCTGGGAGCCCCGGCACGATGGCGGGGCACCAATACTGGAATACATTGTCAAGTACAGAAAGGCTGGCGACTCTCTCAGTGAGTGGACCATAAAGAACATATCTGGTCTGGAGCACAAGCTGATTCTGGCCAAACTGCAGCCGGCCAGCCTGTATGAAGTTGAGATGGCAGCAAGGAACTGTGCTGGACTCGGTCAACCTGCTATGATGACCTTCAGAACTGGTAAAGGACGCAAGAGTGTAGGTGGAGCAATAGAGCGACCCAAAACGCCAGTGTCGCCATCACGTCTGTCTCCCCCTGAAGCTCCAGACAGACCGACGGTAACCACGGCATCAGAGACTTCAGCTTACGTGACGTGGATCCCCCGTGGGAACCGGGGCTTCCCCATTCAGTGTTTTCGAGTGGAGTTTAAGAAACTGAGGAAAGACGGAGGAGCCGGGGGAGAGTGGGAGGTAGCGGAGGACAACATCTCTCCATCACGCCTCTCTGTACAGATCAAAGGCCTGGAGAAAGGGACTTCATATAAGTTCCGGGTTTTGGCTGTGAATGTTTTGGGAGCGAGTCCTCCAAGTGCACCCTCCAAAGCCTACACAGTGATGGGCAGCAACCAGACCAACCCCCGGCCTGTCGATGGCCCCTACATCACCTACTCTGAAGCCATCAATGAGACCACCATCATCCTTAAGTGGACTTACACACCAGTGAATAACACTCCCATCTATGGCTTCTACATCTATTACCGACCCACTGACAGTGATAATGACAGTGACTATAAGAGAGATGTCGTGGAGGGAGACCGATACTGGCACGCCATTACCAGCCTGCAGCCTGAAACGGCGTACGACATTAAGATGCAGTGTTTTAACGAGGGAGGCGTGAGCGAGTTTGGCAATGTGGTCATCTTAGAAACGAAAGCCCGACCCAATCAGAAGCACACGACTCCAGAGACTTCGTCCCACCGGCCGGATTTGGGAGGCCCTGTGCCACGCCCCAGTGATTTACCTTACCTCATAGTGGGAGTGGTGGTGCTGGGAGCCCTCGTTTTCATCATCGTAGCCTTCATTCCATTCTGTCTATGGAGAGCCTGGGCCAAGCAGAAGCAAACGACAGATATGTGCTTTCCAGCTGTGGCTGCACCCCTGTCATCCTGCCAGTACACCATGGTGCCGATGCAGGGCATGGCTTTAGTAGGGCACTGCCCTGTAGACTCCCACCTGACCCCTGGCCATACTGTATACGCACCCAAAGGAGAGTACACCGCCAACGggaaacatcacacacaccgcCTTCCTGGACTACACCAGGAGGATGCAGattgtgaaatggaaaatgGCACATTTTTGCCTCAGAGACTTTCCAATGGACATGCCCATGCTTATCACTACTCCTTGGGTGTTCCCGGTCACGTGGAAGAGGACGGCTGCTGTGAGCCAGACGACTCTACCATGGAGCTCCTGAGCCCCGATCATCCTGAACATGTGCAGGAGAACCACGCTACCCGGTGTTTAGACTTGTCACTGTTACCAGCATCAGAAGCTGTTGGCATGACGACGTCAGTTGAAGATGCAACACAACAGGAAGTTGTCAAGATCCAGTGTGAAAGCCAGCTAGAGGAGCGAGTACGACatgatggatgaaaaaaaatgagggTGCGGGggacataaaacaaaacaaaacaaaaaacacaaaaacagaagagagacagtatttatttttgtattaaagatactatatttatatatttatgctcatgtaaatagtttttatatgttgtatatatGGATTGTTTATATGAGAGAAAAGTGTATTACTGTGTTTGCTTTGTCACCACCAGGATAAAGGAAGTTCCTTGTTCAAGCTGTATTAGCTGTTTTGCTATTGGAAATGTTAACACTATCATTCATAccttacagttaaaaaaaaaaacatcactacGCTGTAAAGAATGCTTTAACGTGAAGATCTTGAGCATAAGACTTGTTTATGAAAGACTGTTTATAACACAGTATTTATCAGCGTATATGTTCCTCATatattattcagaaaaaaaatctgtttcagCCAAAAATTCTCCATACACGGGACTTGAGAAACTCTGTGTTACTGGTGGTGCTCAGCTTCTTCATCCAGTGTTCAAATGTTTTGTAGATATATCACTAAAAAATATGTACTTCATAATTAACAAAGTATTAACAAATGTATGCAATGTATAAACACTCTGCCTTCAGTAATATTGAATACATGTTTTTAAGAAGTGAATGGGAAACCTGGAATGAACACAACTACCTTCAAATActgattttcagattttcagatttatGGAGCTACATGTAAGCTTTTACTTTCAGTctcattttgctgtttgtttgtccaGTTTACGCCAACTGTCTAATCAGTAGTCACATTTGAccattttataaacaaaaataggCTAAGAGGTTTCTAACAGTCGACTGTAGTAACTGaggtgtatatacagtactgtacaaaagtcagagaacacacttttttctattaaaagGCCATTCAGTACTTGTTAATTACTTGATATTAGTACATTAATTCCATTTCCAGGCAAATATTATGCAGGTGTATATTAAAGTTCAATATTGCAAAGGTCtttgaaattttatatatatagcgTCGTCAAAATCTTATATTTAGCTCCTTTAAATCTCCCTAAAACTcttctgaaaactgaaaatcatATCATTTACAGTTTCCACTAGACTGTACAAAGAGACAACACTACTGTATCAGTATTAACCTTCACACAAAGTGCTGAACcttgaaaagaaatgaaggaaaacTCATTTTCGAAGTGTACCTGGCTGTTGTGATTACATGACATACAGCATTATTGCATGTAAATAAAGCTGAAGAAATTACA
>XM_026938146.2
AGAATTGTGTGAGAGCTCAGTCATCCAAAAACGGCCTTTCAATGGGACAAGTTTGGGGGAGCCGAGGAAAATGTCGGTCCCACCGCAGTAAATTACTAAACTAGCTCAGCGCTTTAGAGGGTGGGAAAAAAGGCTAAAGAAACAGTcttacttctttttctttttggtttggGATTAAATTCTGCACGAAGTTGTTGGGAAAAACCTTCACACTCCAGAGAAAAAACAGCTTCATCTCCAGCACTCGTTTTTTTGAGGTGGTATATGGAAGATGTCGAGAATGGCGGACTGGATAGCATGGCATCGGAGGCTTCAGCTGCTTTGTGCTCTGTGCTCAGCTCTTCTGTGCTGTCTGCAGGTTGCTTCTGCTCTCAATGACGATGATGTCCCAGTGTTCATGGAGGAGCCGCTGTCCGTGGTGCAGAAACTTGGGGGCAGCGTGACCCTGCGGTGCAGTGCCCGACCCGCTCAGGCCCGTATCAGCTGGCGCCTGAATGGCCGTGAGCTGTTCGGTAACGGTGATGAGGCCAAGCTGGGTGTGGTGATGCAGTCGGACGCACTCTTTATCCCCTCCCTCTCTAACAGCACGCTGGGACGATACCAGTGTGTGGCCAGCACCAGTGCCGGAGCACGAGCCAGCATGCCTGCAAACGTCACTGCAGCCAagctgcGAGACTTTGAGCCTGATGACCAGCAGGAGATTGAGGTGGATGAAGGGAACACAGCGGTGATCGAGTGTCACCTACCTGAGAGCCAGCCCCAGGCGCAGGTCCGCTACAGCGTCAAGCAGGAGTGGCTCGAAACATCTAAAGGGAATTACCTCATCATGCCATCGGGGAACCTGCAGATCGCCAACGCCACCCAGGAGGACGAGGGGCCTTACAAATGTGCTGCCTACAATCCAGTCACCCAGGAGATCAAGACCTCCACCTCTACTGACCGCCTGCGCATACGCCGTTCGACGTCCGAGGCAGCGAGGATCATCTACCCGCCGGCATCCCGCACCATGACGGTGCGTAAAGGCCACAGGCTGGTTCTGGAGTGTGTAGCCAGCGGCACCCCGACACCTCAGGTCACCTGGGCGAAAGACGGTCGAGAATTAAGCCCTCAAAACAACACTCGCTTCCTGCTCAGCAACCTGCTGATTGACACCGTGAGTGACAGAGACTCGGGCACGTACGCCTGCCACGCCCACAACGGCATGGGCTCTCCTGGCACAGCAACCATTCTCTACGATGTCCAAGTGATCGAGCCCCCTCAGGTGCGGGTGGAGCTGCTGCAGCAGGAGCCAGCGTGGGGCGACACAGTGAGGTTCAGCTGTCAGGTTCGGGGAAATCCGGCACCCAGCGTGGTTTGGCTCCATAACGCTCAACCAATCACTCCATCATCACGTCACCGCCTCTCCTCACACCTGCTGCGTGTCCTCAGCGTGGGCCCGCAGGATGACGGAGTTTACCAGTGCATGGCTGAGAACTGGGTGGGCGGAGCCCAGGATGCCACACGACTCTTCACTGTGCCTGCTGCGCCCTCGCGGCCAGGTCGACTGCCCCTCATTCGGCCGCTGAGCCCTGACCAAGTTCTGCGAGAGCTGCCTCCTGCTCGGCCAATGGCTCCCAGCACAGAGCTTTTCATCGACTGTTCAGAGATCCCCGGGAACGTGTCGCCAGCCGAGGCGCCGGTCATCCTCAGCCAGCCCCGCACAGGCACGGCCGACTTCTACGAGCTCATCTGGGAGCCCCGGCACGATGGCGGGGCACCAATACTGGAATACATTGTCAAGTACAGAAAGGCTGGCGACTCTCTCAGTGAGTGGACCATAAAGAACATATCTGGTCTGGAGCACAAGCTGATTCTGGCCAAACTGCAGCCGGCCAGCCTGTATGAAGTTGAGATGGCAGCAAGGAACTGTGCTGGACTCGGTCAACCTGCTATGATGACCTTCAGAACTGGACGCAAGAGTGTAGGTGGAGCAATAGAGCGACCCAAAACGCCAGTGTCGCCATCACGTCTGTCTCCCCCTGAAGCTCCAGACAGACCGACGGTAACCACGGCATCAGAGACTTCAGCTTACGTGACGTGGATCCCCCGTGGGAACCGGGGCTTCCCCATTCAGTGTTTTCGAGTGGAGTTTAAGAAACTGAGGAAAGACGGAGGAGCCGGGGGAGAGTGGGAGGTAGCGGAGGACAACATCTCTCCATCACGCCTCTCTGTACAGATCAAAGGCCTGGAGAAAGGGACTTCATATAAGTTCCGGGTTTTGGCTGTGAATGTTTTGGGAGCGAGTCCTCCAAGTGCACCCTCCAAAGCCTACACAGTGATGGGCAGCAACCAGACCAACCCCCGGCCTGTCGATGGCCCCTACATCACCTACTCTGAAGCCATCAATGAGACCACCATCATCCTTAAGTGGACTTACACACCAGTGAATAACACTCCCATCTATGGCTTCTACATCTATTACCGACCCACTGACAGTGATAATGACAGTGACTATAAGAGAGATGTCGTGGAGGGAGACCGATACTGGCACGCCATTACCAGCCTGCAGCCTGAAACGGCGTACGACATTAAGATGCAGTGTTTTAACGAGGGAGGCGTGAGCGAGTTTGGCAATGTGGTCATCTTAGAAACGAAAGCCCGACCCAATCAGAAGCACACGACTCCAGAGACTTCGTCCCACCGGCCGGATTTGGGAGGCCCTGTGCCACGCCCCAGTGATTTACCTTACCTCATAGTGGGAGTGGTGGTGCTGGGAGCCCTCGTTTTCATCATCGTAGCCTTCATTCCATTCTGTCTATGGAGAGCCTGGGCCAAGCAGAAGCAAACGACAGATATGTGCTTTCCAGCTGTGGCTGCACCCCTGTCATCCTGCCAGTACACCATGGTGCCGATGCAGGGCATGGCTTTAGTAGGGCACTGCCCTGTAGACTCCCACCTGACCCCTGGCCATACTGTATACGCACCCAAAGGAGAGTACACCGCCAACGggaaacatcacacacaccgcCTTCCTGGACTACACCAGGAGGATGCAGattgtgaaatggaaaatgGCACATTTTTGCCTCAGAGACTTTCCAATGGACATGCCCATGCTTATCACTACTCCTTGGGTGTTCCCGGTCACGTGGAAGAGGACGGCTGCTGTGAGCCAGACGACTCTACCATGGAGCTCCTGAGCCCCGATCATCCTGAACATGTGCAGGAGAACCACGCTACCCGGTGTTTAGACTTGTCACTGTTACCAGCATCAGAAGCTGTTGGCATGACGACGTCAGTTGAAGATGCAACACAACAGGAAGTTGTCAAGATCCAGTGTGAAAGCCAGCTAGAGGAGCGAGTACGACatgatggatgaaaaaaaatgagggTGCGGGggacataaaacaaaacaaaacaaaaaacacaaaaacagaagagagacagtatttatttttgtattaaagatactatatttatatatttatgctcatgtaaatagtttttatatgttgtatatatGGATTGTTTATATGAGAGAAAAGTGTATTACTGTGTTTGCTTTGTCACCACCAGGATAAAGGAAGTTCCTTGTTCAAGCTGTATTAGCTGTTTTGCTATTGGAAATGTTAACACTATCATTCATAccttacagttaaaaaaaaaaacatcactacGCTGTAAAGAATGCTTTAACGTGAAGATCTTGAGCATAAGACTTGTTTATGAAAGACTGTTTATAACACAGTATTTATCAGCGTATATGTTCCTCATatattattcagaaaaaaaatctgtttcagCCAAAAATTCTCCATACACGGGACTTGAGAAACTCTGTGTTACTGGTGGTGCTCAGCTTCTTCATCCAGTGTTCAAATGTTTTGTAGATATATCACTAAAAAATATGTACTTCATAATTAACAAAGTATTAACAAATGTATGCAATGTATAAACACTCTGCCTTCAGTAATATTGAATACATGTTTTTAAGAAGTGAATGGGAAACCTGGAATGAACACAACTACCTTCAAATActgattttcagattttcagatttatGGAGCTACATGTAAGCTTTTACTTTCAGTctcattttgctgtttgtttgtccaGTTTACGCCAACTGTCTAATCAGTAGTCACATTTGAccattttataaacaaaaataggCTAAGAGGTTTCTAACAGTCGACTGTAGTAACTGaggtgtatatacagtactgtacaaaagtcagagaacacacttttttctattaaaagGCCATTCAGTACTTGTTAATTACTTGATATTAGTACATTAATTCCATTTCCAGGCAAATATTATGCAGGTGTATATTAAAGTTCAATATTGCAAAGGTCtttgaaattttatatatatagcgTCGTCAAAATCTTATATTTAGCTCCTTTAAATCTCCCTAAAACTcttctgaaaactgaaaatcatATCATTTACAGTTTCCACTAGACTGTACAAAGAGACAACACTACTGTATCAGTATTAACCTTCACACAAAGTGCTGAACcttgaaaagaaatgaaggaaaacTCATTTTCGAAGTGTACCTGGCTGTTGTGATTACATGACATACAGCATTATTGCATGTAAATAAAGCTGAAGAAATTACA

Function

symbol description
boc Enables identical protein binding activity. Acts upstream of or within regulation of smoothened signaling pathway and retinal ganglion cell axon guidance. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including anterior neural keel; nervous system; neural plate; neural rod; and neural tube. Orthologous to human BOC (BOC cell adhesion associated, oncogene regulated).

NR:

description
brother of CDO

GO:

id name namespace
GO:0031290 retinal ganglion cell axon guidance biological_process
GO:0008589 regulation of smoothened signaling pathway biological_process
GO:0042802 identical protein binding molecular_function

KEGG:

id description
K20020 BOC; brother of CDO

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938144.2 True 4617 mRNA 0.49 19 17678898 17706118
XM_026938146.2 False 4611 mRNA 0.49 19 17678898 17706118

Neighbor

gene id symbol gene type direction distance location
LOC113541191 cfap44 coding upstream 25285 17636383 ~ 17653613 (+)
spice1 spice1 coding upstream 49413 17621946 ~ 17629485 (+)
atp8a2 atp8a2,LOC108438947,LOC107654223,LOC107716405,LOC107584968,LOC107732915 coding upstream 73705 17543823 ~ 17605193 (+)
gpr12 gpr12,LOC107701646,LOC107716385,LOC107654195,LOC107705188 coding upstream 175195 17496077 ~ 17503703 (+)
usp12a usp12,usp12a,LOC107705210,LOC107584971,LOC107591222,LOC107654221 coding upstream 186580 17483693 ~ 17492318 (+)
atp6v1ab atp6v1a,atp6v1ab,LOC107599937,LOC107687683,LOC107591235,LOC107716398,LOC107654231 coding downstream 21735 17727853 ~ 17739585 (+)
chodl chodl coding downstream 236310 17942428 ~ 17951626 (+)
zgc:112408 zgc:112408,LOC108256202,LOC108438348,LOC107721840 coding downstream 254870 17960988 ~ 17963471 (+)
lipib LOC108256469,LOC108438884,LOC107721863,LOC107705251,LOC107590204 coding downstream 267086 17973204 ~ 17983420 (+)
ythdf3 ythdf3,LOC107666630,LOC107705256 coding downstream 381529 18087647 ~ 18097915 (+)
G333791 NA non-coding upstream 8273 17670416 ~ 17670625 (+)
G333787 NA non-coding upstream 11054 17667636 ~ 17667844 (+)
G333582 NA non-coding upstream 231855 17446185 ~ 17447043 (+)
G333548 NA non-coding upstream 315823 17362871 ~ 17363075 (+)
G333360 NA non-coding upstream 492223 17186129 ~ 17186675 (+)
G333779 usf3 non-coding downstream 1604 17707722 ~ 17712380 (+)
G333795 NA non-coding downstream 35283 17741401 ~ 17756282 (+)
G333797 NA non-coding downstream 50207 17756325 ~ 17756542 (+)
G333798 NA non-coding downstream 50440 17756558 ~ 17756798 (+)
G333799 NA non-coding downstream 51606 17757724 ~ 17757929 (+)
rnf6 rnf6,LOC106590444 other upstream 136511 17535944 ~ 17542387 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other upstream 376894 17285082 ~ 17302004 (+)
hhatlb hhatl,hhatlb,LOC108256744,LOC107585011,LOC107701661 other upstream 568871 17100164 ~ 17110027 (+)
G332636 NA other upstream 2112235 15566175 ~ 15566663 (+)
si:ch73-173p19.2 LOC108256301 other upstream 2413003 15251635 ~ 15265895 (+)
pan3 pan3,LOC107705213 other downstream 55413 17761531 ~ 17796521 (+)
G333943 LOC108256468 other downstream 280644 17986762 ~ 17993014 (+)
mtfr1 mtfr1 other downstream 609236 18315354 ~ 18323295 (+)
mcmdc2 mcmdc2 other downstream 761760 18467878 ~ 18486009 (+)
G334373 NA other downstream 987031 18693149 ~ 18717953 (+)

Expression


Co-expression Network