c8g


Basic Information

Item Value
gene id c8g
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 13343746 ~ 13350216 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938165.2
gTGTGCACGTAtggtgcgcgtgtgtgtttgtatttgtctCTGGTGCTGTTGTTGGGTTTTAGTCTCTGGGAACCTGTGGATGGAAGACGAACTCGATACAagccaaaaccaaaaccaaaaccagaTAAAAAGCCCGTTGAGGAGATCGCTCCAGCTCAGAACGTTGATATCAATAAGATGAATGGACAGTGGTACCTGCTAAGTGTGGCGTCGAGATGTAAGTACCTTTTAGAGCATGGCTATAAGATGGAGGGCACCATCATAACTCTGACTGCAACCGACTCACCCAAAGCACCAATCCAAGTGAGCACCTTCACCAAACTAAATTATCAGTGTTGGGAGATCAAACAGCAGTACGAGACCACGAAGAGTCTGGGCCGATTCCTACTGAGAGCAAAGATGCCAGTGAAGAACACTGAGGTCCTCATTGTAGAGACAGACTACAACTCTTATGCCATTTTACTCTATAAGAAAATGAACAACCTCACCTTGAAACTCTACGGCCGCTCCCCAGAGATTGCTGAAGAAATTGTGGATAAATTTGAGGACATTGCAAAGAAACAAAATCTGGGCTTGGATGTTATTTTCCAGTTTCCTAATTATGGGTTTTGTCAGTCTGCAGACAGTGAGCACACACTTGTAATGACCTGAGCAGATCTGTCTTTGTGAGAGACGTCTGTGGATATGACGGCTTCATCATAAACATGAGTACAAGAAACAATCTCAGATGtggcagaaaaaataaagatgatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K03999 C8G; complement component 8 subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938165.2 True 753 mRNA 0.44 7 13343746 13350216

Neighbor

gene id symbol gene type direction distance location
msrb2 msrb2,LOC107735060 coding upstream 2085 13336338 ~ 13341661 (+)
armc3 armc3 coding upstream 9221 13322337 ~ 13334525 (+)
skida1 skida1 coding upstream 65721 13274660 ~ 13278025 (+)
cul1b cul1,LOC107686696,LOC107595130,LOC107727219,LOC107741709,LOC107695409 coding upstream 301230 13021167 ~ 13042516 (+)
LOC113541231 cntnap2,cntnap2a,LOC108256453,LOC108256478,LOC108256479 coding upstream 328637 12766560 ~ 13015109 (+)
klhl15 klhl15,LOC107727232,LOC107695400,LOC107686713 coding downstream 23348 13373564 ~ 13379652 (+)
trnat-agu_17 NA coding downstream 34985 13385201 ~ 13385274 (+)
cmbl cmbl coding downstream 35858 13386074 ~ 13396461 (+)
mtrr mtrr coding downstream 55948 13406164 ~ 13447748 (+)
cbln2b cbln2,cbln2b,LOC107657802,LOC107596058,LOC107741967 coding downstream 625024 13975240 ~ 13980189 (+)
G331468 NA non-coding upstream 53347 13287447 ~ 13290399 (+)
G331487 NA non-coding upstream 69335 13274127 ~ 13274411 (+)
G331486 NA non-coding upstream 69705 13273743 ~ 13274041 (+)
G331482 NA non-coding upstream 74104 13269427 ~ 13269642 (+)
G331480 NA non-coding upstream 79160 13264349 ~ 13264586 (+)
G331498 NA non-coding downstream 10064 13360280 ~ 13361018 (+)
G331496 eif2s3,LOC102783563 non-coding downstream 11153 13361369 ~ 13362702 (+)
G331502 NA non-coding downstream 30428 13380644 ~ 13382636 (+)
LOC117595809 NA non-coding downstream 607808 13958024 ~ 13962184 (+)
G332111 NA non-coding downstream 1337947 14688163 ~ 14703270 (+)
G331476 NA other upstream 85330 13257894 ~ 13258416 (+)
G331263 LOC108256200,LOC100304628 other upstream 631068 12706939 ~ 12712678 (+)
prkag2a prkag2,prkag2a,LOC108256599,LOC108434244,LOC106590432,LOC106579597,LOC107729655,LOC107590261,LOC107757712 other upstream 1186959 12062332 ~ 12156787 (+)
ankha ankh,ankha,LOC108256444,LOC108434238,LOC107724566 other upstream 1595187 11717415 ~ 11748559 (+)
G330257 NA other upstream 2368831 10973264 ~ 10974915 (+)
stau2 stau2,LOC107691439 other downstream 1784137 15134353 ~ 15314968 (+)
si:ch73-173p19.2 LOC108256301 other downstream 1901419 15251635 ~ 15265895 (+)
G332636 NA other downstream 2215959 15566175 ~ 15566663 (+)
hhatlb hhatl,hhatlb,LOC108256744,LOC107585011,LOC107701661 other downstream 3749948 17100164 ~ 17110027 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other downstream 3934866 17285082 ~ 17302004 (+)

Expression


Co-expression Network