ccdc191 (ccdc191)


Basic Information

Item Value
gene id ccdc191
gene name ccdc191
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 17378301 ~ 17390639 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938210.2
CACTCGGGTTGTTTGATGGGTTAGACGCTGTAATGTAGTTATTAAATCGATTTAGAACTTTGAATGAAAAAGTTTGAAACTTATATCACCAATGCTAAAGATCTACACgacattttaatttagtttaagtaaaatgtttactttttctcTGTGTATTATGGAGCTAAATTCCGTCTATTTGTGTATCAGCTGAACTGTATGACTTAAAAATGGCACATCCATCTGATATGTTTCACTGGAAAAGATTTTCCAAACCTGGAACCCAAGCAAGCACCAAGGTGCATCTGAATGATGGGGATATAAACACCTGGATAAAGAAGGTCGAGATGGCATCGGAGTTCGCTGTGTCTGAAGTGTTTTCATCACAGAAACCACACACTGGTAAACCGAGCCGCGTTGTAGCCCTGCAAAGCACGGATCAGCTCCAGGACCATGATGACGCATACAGCGAAGCCCAGACTATTCTTAGCGATTGGATGAACAAGAAGCTGCGCCTAGAGCTTGAAATGgacgaggaagaggaagaagatcTGGCTGAAGATCAACCTGCAAACCTGAACTACAAAAACTTTAATGATATGTATTCCCAGCTTGCGCCTGAAGATGAGAGCTTTGAGGTGCGCCACTTCCTCCAGGACTTGATGGAGACAGACGTGATGGATTGTGAGACAGTACAGGAACTCCGGATGGACAATGAGAAGAAGAGAGGCCGTGATCCGAACGTCACTATGGAGATACGACACAAGCAGGTCAAGGAGCGGCGTGCGCAGCGGGACGCGGAGCGGGAGAGGCAGCGCAGGGAGCAGGAGGCTCAGAGGGAAGCGCTGGAGGAGGCTAAGTGGCTGGAGCGCGAGgaacagaggaagaggaaacaGGAAGCTCAGAGACAGGAGGAGCTTTTGCAGAAGGAAGTGGTGCGTCTACGCAGAGAGATGCAGGAGAAGAAGAGCATGGAGCAGCTGGCACGAAAGAGGGAACGAGAGAGGCTGGAGAAACAAAACACCATCAAGAACTCCATTACGCCAAAACCTGACTTTGTCACGCAGAGGCAGCTGTGCCACAGAGCGCAAGAAGTGGAGGCCAAGGTCCACATTCTCAACCTGCAGtgtaTGCAGAAGCACTTCTCCGCCTGGTACTCTGTGGTTTTAGAGAAAAGGGTGTGGCTGGGTAAAGCAGCGGCGCTCTGTGATTGGAGGAGGCAGCTGAGGGCGTGGCGGGCGTGGAGGGCGCTGGTGTGggtgaggagaaaagagagagaagctgaaagGACAGAGGAGGAACTGAGGTTGGAaaacagacGCTGTCAGCTAGCAGAGGAGAGTGATCGAAGACGGCTCCTGAGGCGCTGCCTGAGTGACTGGCGTTTGTGGTGCCGAATGGAGAGAGAGCGGAGGGAACTACTCAGCCAGCAGGAGGAAACCAGGCAGAAAATGGCCGCGCTGATCGATGCAGCTGCTTCAGGAAAACTAACAACAAAGAACTGCACCGAAccaccaatcacagtccagccAGAGACCGTGAACCAATCAGAAAACACACCTCAGCTGGCCCAGGTACCAGTACAAAGAACCACCTCAGCTCCTCCTCCACCCactttgactgacaggagagcAGCCCCACCCACTCAGGCCTGGCAAGTGACTCGTCGTCACGCTGCACTCTCTTTAGCTGAGGCTCGGGAGGGGCGGAGACTGAGTGGCGCCCCCCGCTGTCAGAGCGCAGAGATGCGCGGTGGCCGGTTTGAGCATCGTCACGTGGCTCAGCAGAGGACCATCGCCGAGCAGAAACGCCTTCTTAAAGAACAGCAGGAAGTTATCTCCGAGCTGCAGGAGAGACAGAAACTTCTGGAACTCAGACAGGAAGCAGAAAAAGCTGAACAGCTAGCAGTCCAGCTCAAAATGTCAGCATCTCAGAATATTATCAAGACAAGTCATGGATCAAAAGGAGCCTCAGGTGAAAGCAGCGCCAGTCGTCCAGCCCCCAAAGAATATGACAGTCGTCTGGCCAACCCTCACCCTGCAGTACGAGCTATGGAGGAGAGAGCTCGGCAGCGTGCGGAGCGCAggagggaggtggaggaggtgaagAGGAGGCGGGAGGAGGAGAAGCTGgcTCAGATGaaggcggaggaggaggagagactgaggcaggaggaggaagagaagcgCGTAGCGGCGgaaaggaggagggaggagaggagacagaagaaggagagggaGATGGAGAAGCAGAGGAGAACAGAGCTGGAGCAGAAGTTGTTAAAGCAGGCAGGAGAGCACTACCGCCGTTCCCTGCTGCTGCACAGAGGAATAACACCATGGAAGCGGCTAGTGGAGCAGAGCCAAGCCAATGctcagAAAGCTGTGGCGCATCACACACAGGTTCTACAAAGACGCTGCCTTCTGTTTTGGCTACACACAACAGACGAGGCACTGGCGGAGAAAAAGAGCCGTGCAGACCATCTATATGAGTGCATTCTGCTCCGGCGAGCCCTATACAGCTGGAAAATGTTTAAGCACCTGCAGTCTCACCTGGAGGTGCGAGCTGAGCACTTCTACATGACTCAGACTCAGAGGAAGGTCTTCAAGGTACTGCTAGATCACGCAATCCACCAGAGACTGGAGGCCTGGGACAGAGAGCAGCAGGCTGACGAGCACAGTGCCAGgcgcGTGGTGAGCAGATGTTTCGCTGCTTGGCGGCGTCTGCCGGAGGCGCTGCAGGAggaaagagagcgagaggagCGGAGAGAGCAGCTCCGACGCAAAGTGGCTGAGATCCTCCCGGACTTCCGATCCTCACCGCTGGACGCCATATGGAGCCCGGTGTCGCACATCTAACAAAATCAAGACCCCACCATTCCCATTTCTTGAAAAATAATTGGCTGGAATtcatgaaga
>XM_034298218.1
CACTCGGGTTGTTTGATGGGTTAGACGCTGTAATGTAGTTATTAAATCGATTTAGAACTTTGAATGAAAAAGTTTGAAACTTATATCACCAATGCTAAAGATCTACACgacattttaatttagtttaagtaaaatgtttactttttctcTGTGTATTATGGAGCTAAATTCCGTCTATTTGTGTATCAGCTGAACTGTATGACTTAAAAATGGCACATCCATCTGATATGTTTCACTGGAAAAGATTTTCCAAACCTGGAACCCAAGCAAGCACCAAGGTGCATCTGAATGATGGGGATATAAACACCTGGATAAAGGTCGAGATGGCATCGGAGTTCGCTGTGTCTGAAGTGTTTTCATCACAGAAACCACACACTGGTAAACCGAGCCGCGTTGTAGCCCTGCAAAGCACGGATCAGCTCCAGGACCATGATGACGCATACAGCGAAGCCCAGACTATTCTTAGCGATTGGATGAACAAGAAGCTGCGCCTAGAGCTTGAAATGgacgaggaagaggaagaagatcTGGCTGAAGATCAACCTGCAAACCTGAACTACAAAAACTTTAATGATATGTATTCCCAGCTTGCGCCTGAAGATGAGAGCTTTGAGGTGCGCCACTTCCTCCAGGACTTGATGGAGACAGACGTGATGGATTGTGAGACAGTACAGGAACTCCGGATGGACAATGAGAAGAAGAGAGGCCGTGATCCGAACGTCACTATGGAGATACGACACAAGCAGGTCAAGGAGCGGCGTGCGCAGCGGGACGCGGAGCGGGAGAGGCAGCGCAGGGAGCAGGAGGCTCAGAGGGAAGCGCTGGAGGAGGCTAAGTGGCTGGAGCGCGAGgaacagaggaagaggaaacaGGAAGCTCAGAGACAGGAGGAGCTTTTGCAGAAGGAAGTGGTGCGTCTACGCAGAGAGATGCAGGAGAAGAAGAGCATGGAGCAGCTGGCACGAAAGAGGGAACGAGAGAGGCTGGAGAAACAAAACACCATCAAGAACTCCATTACGCCAAAACCTGACTTTGTCACGCAGAGGCAGCTGTGCCACAGAGCGCAAGAAGTGGAGGCCAAGGTCCACATTCTCAACCTGCAGtgtaTGCAGAAGCACTTCTCCGCCTGGTACTCTGTGGTTTTAGAGAAAAGGGTGTGGCTGGGTAAAGCAGCGGCGCTCTGTGATTGGAGGAGGCAGCTGAGGGCGTGGCGGGCGTGGAGGGCGCTGGTGTGggtgaggagaaaagagagagaagctgaaagGACAGAGGAGGAACTGAGGTTGGAaaacagacGCTGTCAGCTAGCAGAGGAGAGTGATCGAAGACGGCTCCTGAGGCGCTGCCTGAGTGACTGGCGTTTGTGGTGCCGAATGGAGAGAGAGCGGAGGGAACTACTCAGCCAGCAGGAGGAAACCAGGCAGAAAATGGCCGCGCTGATCGATGCAGCTGCTTCAGGAAAACTAACAACAAAGAACTGCACCGAAccaccaatcacagtccagccAGAGACCGTGAACCAATCAGAAAACACACCTCAGCTGGCCCAGGTACCAGTACAAAGAACCACCTCAGCTCCTCCTCCACCCactttgactgacaggagagcAGCCCCACCCACTCAGGCCTGGCAAGTGACTCGTCGTCACGCTGCACTCTCTTTAGCTGAGGCTCGGGAGGGGCGGAGACTGAGTGGCGCCCCCCGCTGTCAGAGCGCAGAGATGCGCGGTGGCCGGTTTGAGCATCGTCACGTGGCTCAGCAGAGGACCATCGCCGAGCAGAAACGCCTTCTTAAAGAACAGCAGGAAGTTATCTCCGAGCTGCAGGAGAGACAGAAACTTCTGGAACTCAGACAGGAAGCAGAAAAAGCTGAACAGCTAGCAGTCCAGCTCAAAATGTCAGCATCTCAGAATATTATCAAGACAAGTCATGGATCAAAAGGAGCCTCAGGTGAAAGCAGCGCCAGTCGTCCAGCCCCCAAAGAATATGACAGTCGTCTGGCCAACCCTCACCCTGCAGTACGAGCTATGGAGGAGAGAGCTCGGCAGCGTGCGGAGCGCAggagggaggtggaggaggtgaagAGGAGGCGGGAGGAGGAGAAGCTGgcTCAGATGaaggcggaggaggaggagagactgaggcaggaggaggaagagaagcgCGTAGCGGCGgaaaggaggagggaggagaggagacagaagaaggagagggaGATGGAGAAGCAGAGGAGAACAGAGCTGGAGCAGAAGTTGTTAAAGCAGGCAGGAGAGCACTACCGCCGTTCCCTGCTGCTGCACAGAGGAATAACACCATGGAAGCGGCTAGTGGAGCAGAGCCAAGCCAATGctcagAAAGCTGTGGCGCATCACACACAGGTTCTACAAAGACGCTGCCTTCTGTTTTGGCTACACACAACAGACGAGGCACTGGCGGAGAAAAAGAGCCGTGCAGACCATCTATATGAGTGCATTCTGCTCCGGCGAGCCCTATACAGCTGGAAAATGTTTAAGCACCTGCAGTCTCACCTGGAGGTGCGAGCTGAGCACTTCTACATGACTCAGACTCAGAGGAAGGTCTTCAAGGTACTGCTAGATCACGCAATCCACCAGAGACTGGAGGCCTGGGACAGAGAGCAGCAGGCTGACGAGCACAGTGCCAGgcgcGTGGTGAGCAGATGTTTCGCTGCTTGGCGGCGTCTGCCGGAGGCGCTGCAGGAggaaagagagcgagaggagCGGAGAGAGCAGCTCCGACGCAAAGTGGCTGAGATCCTCCCGGACTTCCGATCCTCACCGCTGGACGCCATATGGAGCCCGGTGTCGCACATCTAACAAAATCAAGACCCCACCATTCCCATTTCTTGAAAAATAATTGGCTGGAATtcatgaaga

Function

symbol description
ccdc191 Is expressed in several structures, including axis; head mesenchyme; mesoderm; musculature system; and pronephric duct. Orthologous to human CCDC191 (coiled-coil domain containing 191).

NR:

description
PREDICTED: coiled-coil domain-containing protein KIAA1407 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938210.2 True 2897 mRNA 0.53 16 17378301 17390639
XM_034298218.1 False 2894 mRNA 0.53 16 17378301 17390639

Neighbor

gene id symbol gene type direction distance location
drd3 drd3 coding upstream 24992 17336192 ~ 17353309 (+)
si:ch211-161h7.8 LOC108256135 coding upstream 44792 17329834 ~ 17333509 (+)
fam162a NA coding upstream 62601 17310721 ~ 17315700 (+)
LOC113541297 LOC108256406 coding upstream 78911 17296573 ~ 17299390 (+)
LOC117595788 NA coding upstream 87406 17287140 ~ 17290895 (+)
urad urad coding downstream 41407 17432046 ~ 17434825 (+)
lnx2a lnx2,lnx2a,LOC107716412,LOC107584972,LOC107701681,LOC107591221 coding downstream 60084 17450723 ~ 17466452 (+)
usp12a usp12,usp12a,LOC107705210,LOC107584971,LOC107591222,LOC107654221 coding downstream 93054 17483693 ~ 17492318 (+)
gpr12 gpr12,LOC107701646,LOC107716385,LOC107654195,LOC107705188 coding downstream 105438 17496077 ~ 17503703 (+)
atp8a2 atp8a2,LOC108438947,LOC107654223,LOC107716405,LOC107584968,LOC107732915 coding downstream 153184 17543823 ~ 17605193 (+)
G333548 NA non-coding upstream 15226 17362871 ~ 17363075 (+)
G333360 NA non-coding upstream 191626 17186129 ~ 17186675 (+)
G333244 map3k20,LOC108439325,LOC108256334,LOC102795565,LOC101475626 non-coding upstream 480446 16893006 ~ 16897855 (+)
LOC113541357 NA non-coding upstream 488140 16888906 ~ 16890161 (+)
G333232 NA non-coding upstream 548322 16732916 ~ 16829979 (+)
G333582 NA non-coding downstream 55546 17446185 ~ 17447043 (+)
G333787 NA non-coding downstream 276997 17667636 ~ 17667844 (+)
G333791 NA non-coding downstream 279777 17670416 ~ 17670625 (+)
G333779 usf3 non-coding downstream 317083 17707722 ~ 17712380 (+)
G333795 NA non-coding downstream 350762 17741401 ~ 17756282 (+)
G333388 csta,LOC108256407,LOC107654238,LOC107701640,LOC108256406,LOC108256405,LOC107591268 other upstream 76297 17285082 ~ 17302004 (+)
hhatlb hhatl,hhatlb,LOC108256744,LOC107585011,LOC107701661 other upstream 268274 17100164 ~ 17110027 (+)
G332636 NA other upstream 1811638 15566175 ~ 15566663 (+)
stau2 stau2,LOC107691439 other upstream 2063333 15134353 ~ 15314968 (+)
rnf6 rnf6,LOC106590444 other downstream 145305 17535944 ~ 17542387 (+)
pan3 pan3,LOC107705213 other downstream 370892 17761531 ~ 17796521 (+)
G333943 LOC108256468 other downstream 596123 17986762 ~ 17993014 (+)
mtfr1 mtfr1 other downstream 924715 18315354 ~ 18323295 (+)
mcmdc2 mcmdc2 other downstream 1077239 18467878 ~ 18486009 (+)

Expression


Co-expression Network