tmx3b (tmx3,LOC107693466)


Basic Information

Item Value
gene id tmx3b
gene name tmx3,LOC107693466
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 10345323 ~ 10426436 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938241.2
TCTAACCTACAGTGCGTTTCCGCGCATGCTCAGAAGTATACTGTTACTTCTAGCGTTTCCTGTTTTACGCTGTTCATTGGCAAAGATggcagaaatgaaagaaatgaaggcTTTGACTTATGGAGTGATCACGACGATTCTTTTAAGTTCCGCTGTTTTCGCATTGGTGGAGGACCTCGATGACACATTCAAAGACAACAGAATGGATGATGTCTGGCTGGTGGATTTTTATGCTCCCTGGTGTGGATACTGTAAGAAGCTGGAACCGATCTGGTATGAGGTAGGAGCTGAGCTAAAGAACTCTGGATCACCCGTCCGAGTGGGAAAGATGGATGCCACTGCATACTCTGGCATGGCTTCTGAGTTTGGAGTACGAGGATATCCAACAATAAAACTacTAAAGGGGGAACTCGCTTATAATTATAAAGGACCCAGGACCAAAGATGACATCATTGAGTTTGCTAACAGAGTGGCTGGGCCTTCTGTGCGGTCACTCCCAAGCAGACAGATGTTTGAGCACGTCTTGAAGAGGCACAACGTACTATTTGTGTACATAGGGGGAGAGTCACTGCTCAAGGAGAAGTACATAGACGTGGCTTCTGAACTTATTGTTTACACCTACTTTTTCTCTGCCTCTGAGGACATCATACCTGAGCAGTACGTGACATTGTCTGAACTGCCCTGCGTGGTTGTGTTCAAGGACGGGACCTATTTCACTTATGATGAGTATGAAGATGGCAGCTTGGCATCATGGGTGAACAGGGAACGTTTCCAAGGTTACCTGCAGATTGACGGCTTCACACTCTATGAGCTGGGGGAGACAGGTAAATTGGTAGCAATTGCCGTAATTGATGAAAAGGTTTCAACAGAAGAAAGCTTGAGGTTAAAGAGTCtcatacagagagtttcaaccGAGTACAGGGACAACTTCTACAGGGATTTCCAATTTGGCCATATGGATGGTAATGACTACATCAACAGCCTCATCATGGGTGAGGTAGCTGTGCCGTCTGTCATTGTCCTGAACACATCTAATGAGCAGTACTTCCTGCCCAGCGAGCCCATGGAGAGTCTGGAGCAACTGATCAGCTTCATCAGGAGTGTCTTGGATGGCACAGCTCAGGCTTATGGAGGGGACGGATTTTTTCACAGACTCAAGCGTGTGGCCTATGATGCCAGATCCACCATCATGtcTGTATTCCGCAGTTCTCCGGTGCTGGCCTGTTTCCTCTTCGGCCTGCCATTAGGTGTCATTAGTCTCATGTGCTATGGCATATGCACAGCTGAGTCAGACGATGATGTAGAGCTGATTAAGCaagagggacagacagatgagGAGGACGAAGAGGAGGACGAAGATGTGAGACGGCATCTGGCTGCACAGCTCAAGGGCCCAGGAGAGGGCGATGAGATAGAAGAGCTAGAGGAAAAGAGTGCAGCAGAGAAAAAGCTTGATTAACACAGGGGAGGTGTGTGGATGAAAGGGAAGGTAATAACAGAAATGcagacattaaacatttatcTGGTTTCACATTTTTGAATCACTCCTGCACTCTGATTTACTGCTGTAGGGTTTAAAAGGTGAGTTTGAAAACTTTTTTagtgatttcctttttttaatttatatctgTTTGAGAGTTATGGAATTATGAGGTCAGGAGTTGTAATATCAGAGTTCTCTGAGGTTCTGAGGTTCAGCTGAATGGCAAATGGATTGTCATTTCTGCTGGGTGTGAATCATAAAAGTCTCCTTTCATCAGTCATTCTGTTTTATATGCTACAGGCAATCCTGTCTAGCATTTTAGTCCAGTGCTCATTATCTATCCACTGTGCAAATTGCTCTTGCTGTGTTGCACTGCTTTGGTATTGTTAGATGTAGATATTAGCTATGTTTTGCCCATGCTCTAGCTATGTTAAGCTCCATGCTCTAAATCAGTATGAGATTTAAACACAAGAAGACTCAGCATTCATGAAAATAGAGGTttcaaatgcagcataatttccctgctaaaaaacaaaacacacaaagctGTAAAGGCATTACTTAAAAGACATTTGACAGATTTGGTAAGCATGTAATCACCAGTGTGTGAAACAAACAATGAAGTGAGAGACTGATCAAGATACACTGTATCGACATTACATATGAAGTAAAACGAATGAATTGGGCCTTTACTTCCAGAACTTTACTTCCAAAACTTTCCTATGCTCATTTTACCATCACCATTGCcagtaaattacattttttgcaAGGTAATAGATGCAATTCAAGTTAATTGCACTTTTCTCATATGACAGGTTATGTATGGTTTGGGCAACGGTTTAATGCTTAAAGCCTTTTTTTGTGACATCTAAAATTTAACAAAGATGTCTTCACATATTAGAACACAACAGGTAATCaagataaaatgtttaaaatagtgTTTTGGATAGAATTTTCctgtctgtgtatatatacagtcaggtccggaagtatttggacaatgacagagtttttgtgattttgcctttatacaccaccacaatggatttg
>XM_026938242.2
TCTAACCTACAGTGCGTTTCCGCGCATGCTCAGAAGTATACTGTTACTTCTAGCGTTTCCTGTTTTACGCTGTTCATTGGCAAAGATggcagaaatgaaagaaatgaaggcTTTGACTTATGGAGTGATCACGACGATTCTTTTAAGTTCCGCTGTTTTCGCATTGGTGGAGGACCTCGATGACACATTCAAAGACAACAGAATGGATGATGTCTGGCTGGTGGATTTTTATGCTCCCTGGTGTGGATACTGTAAGAAGCTGGAACCGATCTGGTATGAGGTAGGAGCTGAGCTAAAGAACTCTGGATCACCCGTCCGAGTGGGAAAGATGGATGCCACTGCATACTCTGGCATGGCTTCTGAGTTTGGAGTACGAGGATATCCAACAATAAAACTacTAAAGGGGGAACTCGCTTATAATTATAAAGGACCCAGGACCAAAGATGACATCATTGAGTTTGCTAACAGAGTGGCTGGGCCTTCTGTGCGGTCACTCCCAAGCAGACAGATGTTTGAGCACGTCTTGAAGAGGCACAACGTACTATTTGTGTACATAGGGGGAGAGTCACTGCTCAAGGAGAAGTACATAGACGTGGCTTCTGAACTTATTGTTTACACCTACTTTTTCTCTGCCTCTGAGGACATCATACCTGAGTACGTGACATTGTCTGAACTGCCCTGCGTGGTTGTGTTCAAGGACGGGACCTATTTCACTTATGATGAGTATGAAGATGGCAGCTTGGCATCATGGGTGAACAGGGAACGTTTCCAAGGTTACCTGCAGATTGACGGCTTCACACTCTATGAGCTGGGGGAGACAGGTAAATTGGTAGCAATTGCCGTAATTGATGAAAAGGTTTCAACAGAAGAAAGCTTGAGGTTAAAGAGTCtcatacagagagtttcaaccGAGTACAGGGACAACTTCTACAGGGATTTCCAATTTGGCCATATGGATGGTAATGACTACATCAACAGCCTCATCATGGGTGAGGTAGCTGTGCCGTCTGTCATTGTCCTGAACACATCTAATGAGCAGTACTTCCTGCCCAGCGAGCCCATGGAGAGTCTGGAGCAACTGATCAGCTTCATCAGGAGTGTCTTGGATGGCACAGCTCAGGCTTATGGAGGGGACGGATTTTTTCACAGACTCAAGCGTGTGGCCTATGATGCCAGATCCACCATCATGtcTGTATTCCGCAGTTCTCCGGTGCTGGCCTGTTTCCTCTTCGGCCTGCCATTAGGTGTCATTAGTCTCATGTGCTATGGCATATGCACAGCTGAGTCAGACGATGATGTAGAGCTGATTAAGCaagagggacagacagatgagGAGGACGAAGAGGAGGACGAAGATGTGAGACGGCATCTGGCTGCACAGCTCAAGGGCCCAGGAGAGGGCGATGAGATAGAAGAGCTAGAGGAAAAGAGTGCAGCAGAGAAAAAGCTTGATTAACACAGGGGAGGTGTGTGGATGAAAGGGAAGGTAATAACAGAAATGcagacattaaacatttatcTGGTTTCACATTTTTGAATCACTCCTGCACTCTGATTTACTGCTGTAGGGTTTAAAAGGTGAGTTTGAAAACTTTTTTagtgatttcctttttttaatttatatctgTTTGAGAGTTATGGAATTATGAGGTCAGGAGTTGTAATATCAGAGTTCTCTGAGGTTCTGAGGTTCAGCTGAATGGCAAATGGATTGTCATTTCTGCTGGGTGTGAATCATAAAAGTCTCCTTTCATCAGTCATTCTGTTTTATATGCTACAGGCAATCCTGTCTAGCATTTTAGTCCAGTGCTCATTATCTATCCACTGTGCAAATTGCTCTTGCTGTGTTGCACTGCTTTGGTATTGTTAGATGTAGATATTAGCTATGTTTTGCCCATGCTCTAGCTATGTTAAGCTCCATGCTCTAAATCAGTATGAGATTTAAACACAAGAAGACTCAGCATTCATGAAAATAGAGGTttcaaatgcagcataatttccctgctaaaaaacaaaacacacaaagctGTAAAGGCATTACTTAAAAGACATTTGACAGATTTGGTAAGCATGTAATCACCAGTGTGTGAAACAAACAATGAAGTGAGAGACTGATCAAGATACACTGTATCGACATTACATATGAAGTAAAACGAATGAATTGGGCCTTTACTTCCAGAACTTTACTTCCAAAACTTTCCTATGCTCATTTTACCATCACCATTGCcagtaaattacattttttgcaAGGTAATAGATGCAATTCAAGTTAATTGCACTTTTCTCATATGACAGGTTATGTATGGTTTGGGCAACGGTTTAATGCTTAAAGCCTTTTTTTGTGACATCTAAAATTTAACAAAGATGTCTTCACATATTAGAACACAACAGGTAATCaagataaaatgtttaaaatagtgTTTTGGATAGAATTTTCctgtctgtgtatatatacagtcaggtccggaagtatttggacaatgacagagtttttgtgattttgcctttatacaccaccacaatggatttg
>XM_026938243.2
ATCTAACCTACAGTGCGTTTCCGCGCATGCTCAGAAGTATACTGTTACTTCTAGCGTTTCCTGTTTTACGCTGTTCATTGGCAAAGATggcagaaatgaaagaaatgaaggcTTTGACTTATGGAGTGATCACGACGATTCTTTTAAGTTCCGCTGTTTTCGCATTGGTGGAGGACCTCGATGACACATTCAAAGACAACAGAATGGATGATGTCTGGCTGGTGGATTTTTATGCTCCCTGGTGTGGATACTGTAAGAAGCTGGAACCGATCTGGTATGAGGTAGGAGCTGAGCTAAAGAACTCTGGATCACCCGTCCGAGTGGGAAAGATGGATGCCACTGCATACTCTGGCATGGCTTCTGAGTTTGGAGTACGAGGATATCCAACAATAAAACTacTAAAGGGGGAACTCGCTTATAATTATAAAGGACCCAGGACCAAAGATGACATCATTGAGTTTGCTAACAGAGTGGCTGGGCCTTCTGTGCGGTCACTCCCAAGCAGACAGATGTTTGAGCACGTCTTGAAGAGGCACAACGTACTATTTGTGTACATAGGGGGAGAGTCACTGCTCAAGGAGAAGTACATAGACGTGGCTTCTGAACTTATTGTTTACACCTACTTTTTCTCTGCCTCTGAGGACATCATACCTGAGCAGTACGTGACATTGTCTGAACTGCCCTGCGTGGTTGTGTTCAAGGACGGGACCTATTTCACTTATGATGAGTATGAAGATGGCAGCTTGGCATCATGGGTGAACAGGGAACGTTTCCAAGGTTACCTGCAGATTGACGGCTTCACACTCTATGAGCTGGGGGAGACAGaaCTCCCACTGGTAGACACACTCCCTTGGCAACACATAGAATGGCATTTAGATGAGCTACTCTGTGCCAGTTAAGTTTTTCTTGTCAGctgaaaagattttttataGAAAAAGCACACCTTGAAATCCAAT

Function

symbol description
tmx3 Enables protein-disulfide reductase activity. Involved in peptidyl-cysteine oxidation. Located in cell surface and endoplasmic reticulum membrane.

NR:

description
PREDICTED: protein disulfide-isomerase TMX3-like

GO: NA

KEGG:

id description
K09585 TXNDC10; thioredoxin domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938241.2 True 2533 mRNA 0.42 16 10345324 10426436
XM_026938242.2 False 2530 mRNA 0.42 16 10345324 10426436
XM_026938243.2 False 956 mRNA 0.46 11 10345323 10386998

Neighbor

gene id symbol gene type direction distance location
LOC113541200 dnajc13 coding upstream 3422 10182791 ~ 10341901 (+)
sycp2l sycp2l,LOC108261788 coding upstream 783134 9510608 ~ 9562189 (+)
tmem14ca tmem14c,tm14c,tmem14ca,LOC107671380 coding upstream 893980 9438298 ~ 9451343 (+)
eef1e1 eef1e1,LOC107664672,LOC107572674,LOC107730010 coding upstream 929941 9400242 ~ 9415382 (+)
slc35b3 slc35b3,LOC107730012,LOC107667423 coding upstream 995817 9333115 ~ 9349506 (+)
lztfl1 lztfl1,LOC107701792 coding downstream 14521 10440957 ~ 10477542 (+)
ccr9b LOC108256084,LOC108442972 coding downstream 122292 10548728 ~ 10552018 (+)
prpf4bb prpf4b,prpf4bb,LOC108442973,LOC107738454,LOC107598186,LOC107670278,LOC107554722,LOC107749644 coding downstream 384170 10810606 ~ 10828391 (+)
pxdc1b pxdc1,LOC103040287,LOC107728142,LOC107554723 coding downstream 415247 10841683 ~ 10860448 (+)
myrip myrip,LOC107724561 coding downstream 695959 11122395 ~ 11308612 (+)
G329976 NA non-coding upstream 65356 10213263 ~ 10279967 (+)
G329975 NA non-coding upstream 132893 10209923 ~ 10212430 (+)
G329964 NA non-coding upstream 158386 10174629 ~ 10186937 (+)
G329949 NA non-coding upstream 181203 10163919 ~ 10164120 (+)
G329942 NA non-coding upstream 186738 10158355 ~ 10158585 (+)
G330049 NA non-coding downstream 26547 10452983 ~ 10454904 (+)
G330052 NA non-coding downstream 56893 10483329 ~ 10483668 (+)
G330056 NA non-coding downstream 93455 10519891 ~ 10520607 (+)
G330059 NA non-coding downstream 107035 10533471 ~ 10533787 (+)
G330063 NA non-coding downstream 148453 10574889 ~ 10575096 (+)
cdh19 LOC108256684 other upstream 406855 9856182 ~ 9938468 (+)
G329779 NA other upstream 552590 9791684 ~ 9792733 (+)
gnal gnal,LOC108426578,LOC106590334,LOC107702493,LOC106579638,LOC107726148 other upstream 657832 9621679 ~ 9687491 (+)
bmp6 bmp6 other upstream 1422530 8851404 ~ 8922793 (+)
LOC113532648 ptprh,LOC108256157 other upstream 1524012 8768745 ~ 8821311 (+)
G330038 NA other downstream 4897 10431333 ~ 10432864 (+)
gli3 gli3,LOC108444237 other downstream 168694 10595130 ~ 10768360 (+)
acad11 acad11,LOC107715568,LOC104947469 other downstream 447773 10874209 ~ 10984209 (+)
G330257 NA other downstream 546828 10973264 ~ 10974915 (+)
ankha ankh,ankha,LOC108256444,LOC108434238,LOC107724566 other downstream 1290979 11717415 ~ 11748559 (+)

Expression


Co-expression Network