LOC117595766


Basic Information

Item Value
gene id LOC117595766
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 21011498 ~ 21013434 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034297845.1
ATGAGTGCGCTGAGTGATCAGCACCAGTCGCCTACCGCACACCGGACCACGGCGCCAGTCGCCAACCGCACACCAAAACCACGGCGCCAGTCGCCAACCGCACACCAAACCACGGGGCCAGTCGCCTACCGCGACACCAAAACCACCATGGCGACACCCAGTCGCTATCGCGACACCAAACCGCGCGCCACACCAAACCAGTCGCCACCGCGACACCACAGTCGCCAGCCTATCGCGACACCAAACCAATCGCCAGTCGTACCAATTAAACCAGGGCGGCGCACACCAAACCAATCAGTCGCTTTATCGCGACACCAAACCACGGCGCCAGTCGCTTATCGCACACCAAACCACGGCGCCAGTCGCTTATCGCACACCAAACCACGGCGCCAGTCGCTTATCGCACACCAAACCACGGCGCCAGTCGCCTACCGCGCCAGTTGCTTATCGCACACCAAACCACGGGCGCCAGTCGCCTACCGCGACACCAAACCCAAACCAGTCGCCACCGCATTACAGCCTACGCACACCAAACCACGCCAGTCGCCTACCGCACACCAAACCAGGGCGCCAGTCGCCTACCGCACACCAAACCACGGCGCCAGTCGCCTACCGCACACCAAACCACGGCACCAGTCGCCATACACCAAACCCAGCACCACACCCCGCTCCCACAACGGACGCAACCGGGAAAAACTATCGATCGTGTGGGTTCTTGCCGTTAACCAACAATTCCAGCAATCAGTGCCGTTTAACCGACCTCTACACCGACCACGCGCCAGTCGCTACAGCGCAAGACCAAAACCACGGGCGCCAGTCGCCTACCGCGCAAGACCGGACCACGGGCGCCAGTCGCCATCAAGACCGACCACGGCGCCAGTCGCCTACCGCGCAAAACCACGGCGCCAGTCGCCTACCAGCAAGACCGGACCACGGGCGCCAGTCGCCTACAAGACCGACCACGGGCGCCAGTCGCTACCATCGCAAGACCGGACCACGGGTGGGCCAGTCGCCATCAGCAAGACGGACCACGGGCCAGCCAGTCGCCATCACAAGACCGACCACGGCGCCAGTCGCCTATCACAAGCCAAAACCACGGCGCCAGTCGCCATCACAAGACCGGACCACGGGCGCCAGTCGCCATCACAAGACCGACCACGGGCGCCAGTCGCCACCGCGAGAGCAAACAACAGCACGGGCTACTCCAGAGTGTTTACCAGGCACACACCACCAAACCTATGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034297845.1 True 1245 mRNA 0.63 3 21011498 21013434

Neighbor

gene id symbol gene type direction distance location
zmynd11 zmynd11 coding downstream 270619 20726533 ~ 20740879 (-)
pld1b pld1b,LOC108256388,LOC108413108,LOC107663701,LOC107685440,LOC107586751,LOC107721916 coding downstream 523354 20445239 ~ 20488144 (-)
tnikb tnik,tnikb,LOC103024681,LOC107685441,LOC106578374,LOC108440401,LOC107721871,LOC107725857,LOC103377179 coding downstream 573667 20376679 ~ 20437831 (-)
eif5a eif5a2,eif5a,LOC107590245,LOC107685442,LOC107586748 coding downstream 636449 20369151 ~ 20375049 (-)
rpl22l1 rpl22l1,LOC102776745 coding downstream 644857 20364456 ~ 20366641 (-)
G335859 NA non-coding downstream 9387 20922907 ~ 21002111 (-)
G335831 NA non-coding downstream 266482 20744559 ~ 20745016 (-)
G335800 NA non-coding downstream 349669 20660628 ~ 20661829 (-)
G335498 NA non-coding downstream 817117 20121516 ~ 20194381 (-)
LOC113541188 NA non-coding downstream 838574 20167317 ~ 20172924 (-)
G335868 NA non-coding upstream 3512 21016946 ~ 21018572 (-)
G335865 NA non-coding upstream 9523 21022957 ~ 21024079 (-)
G335867 NA non-coding upstream 10907 21024341 ~ 21024574 (-)
G335788 larp4b other downstream 399189 20610232 ~ 20612309 (-)
stag1b stag1,stag1b,LOC108434968,LOC107590250 other downstream 419882 20560090 ~ 20591616 (-)
fndc3bb fndc3b,fndc3bb,LOC108434945 other downstream 453539 20497088 ~ 20557959 (-)
otos otos,LOC108440409 other downstream 763037 20246451 ~ 20248461 (-)
cops9 NA other downstream 765187 20242488 ~ 20246311 (-)

Expression


Co-expression Network