sh3kbp1 (sh3kbp1,LOC107590295)


Basic Information

Item Value
gene id sh3kbp1
gene name sh3kbp1,LOC107590295
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 20050736 ~ 20112391 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034297987.1
gtgtgtgtaacggagcagcagcagcagcagcagcggccACATCACACAGCTCTTCTCCTCCGCTACATTGTCGCCGCTCTGCTTTCATCTCGCGCGGGGACGTAACGGAGCGCGAGGCGAGCGGGGGGACATTGTGCGCGCGAGCCGTGCCGTGTCTCGCCACTGAGCCGTTTAAAGCCGCGTTTTCTGTTTCAGcgtcattttgtttttgttttgtttttttttccctctgaagCTCGCAGCTCCTTCAACTCCACTGAGCTGgagagttattattattattattatttttactttatttattactctttttttttctttttcttttttcattctccaGCCCTCAGTCTCCGGGAGGATCACGAGGCggaaataaagtttataaatgGtcaagtcaaagtcgaaagtggagGCTGTAGTGGAGTTTGACTACCAGGCCCAGCACGATGACGAGTTGACCATCGCCATCGgtgacatcatcagcaacatcagGAAGGATGAGGGGGGCTGGTGGGAGGGCGAGGTGGACGGCCGGAGGGGCCTGTTTCCAGACAACTTCGTCAGGGAGATTAAAAAGGAGGTGAAGAAGGAGCTCAGCTCGGCCTCCCAAGTGGCCAAATCGGATCTGTCCAACGGCAGCGCCAGTCCCGGATCAGAATCCAGCCTCAGACCAGCCAAGAAAGGAGAGGCCATACGGAAGAGACGCTGCAAAGCCGCCTTTAGCTACATCCCGCAGAATGAAGACGAGCTGGAGCTCAAGATCGGAGACGTCATCGAGGTCCTGGGAGAGGTGGAGGAGGGCTGGTGGGAAGGATGTCTCAACGGCAAGACCGGAATGTTCCCTTCCAACTTCACTGTACAGCTGCCGGCCGACACGGAGGATCTGACGTCCCCACCTGAGGACACACGCAGCACACGGACCAgtgtgaagGACAGCACGGGCTCGGAGAGTGACGGAGGAGACAGTAGCAGCATTCGTTCAGACGCAGGCAGCGTCGCCTCCAGCAGCGAAATTCAGCCCAAGAAGGTGCGCGGCTTCGGATTCGGAGACATCTTCAAAGATCAGCCCATTAAGCTCCGCCCACGATCCATGGACCTCGACAGCGAACTGGAGAAGCTGACAGTGAAGAAAGCAGCGCCGTCTGTTCCTCAGGAAACCATGAAGACGGAACCTGAAAACAAGGCCAAAGTGAAGGAGCTCTGTAAAGTGTTATTCCCGTACGACGCCCAGAACGAGGACGAGCTGTCAATCAAGGAGGGAGACATCGTTACCATCGTCAGTaaggagtgtgccGATGCAGGCTGGTGGCTCGGCGAGCTGAACGGTAAACAGGGTGTGTTTCCCGACAACTTTGTGAAGCTCTTTGTTCCCGAGGTGGAGAAAGAGaggcCTAAGAAACCGCCTCCTCCTGCAGCACCCACTACTAAACCCATCACAGACAAAAAGCCAGAGGTTAAAAAGGTTCCTCCCGAGCGGCCCGAGTCTCTTCCGCAGCGAGCCGAGGAGAAAGGTGATGAAATCAAGTTGGTTGAGTTCCAGAAGCCGGTGCTTCCCATCTTTCCACCGAAGAAGCCTTTACCCCCGAAGAGCAACAACTCCCTGACCCGACCCCCTAAACGACCCGAGCGACCCGAGAGACCCGAGAGACCGGCCGCGCCCAGCGCACAgtgtgacAGTTCTGGTGTAGCTTCAGATCGGACGTCCTCAGACAAATCAGCTGAAATCGATATAGACGACTTCGACTCCATCGTCTCCTCCACAGAGAAGCTGAGCCACCCCACTGCCTCCAGACCTCGAGTCACAGACCGCCGACCTCGCTCTCAGATCTTCACAtcttcctctctctccagctctgacCTCCTGGACTCGCTGTCTCCGGAGGacgaacagagagagagggagaaggggaAGGACGAGCCGGACTCATTCCCTCCCAGATCTCTCGACAACACCAGGAAGATGCCCAAGGCACTGCCCATCATCACAGCTCCTGAGAAGTCCTCCAAACCCTCATCTCTGACCACAACTCCAGGTGCCGCTGCCCTCAGGCCTCACTCTCCCTCCATTGAGGCCAAGATGAAGAGCGAGCAGGGTTCCACCGTGCTGGAGGAGCTCAGAGCTCAACTACGAGAGCTGAGGGCCACCGTGGAGCTGATGAAGAGCCAGCACAAACAAGAGATGAAACAGCTTGTGAGCGAACTAGATGAGGAGAAAAAGATCCGCTTATCCCTGCAGatggATGTCGAGAACATAAAGAAGGTTCTGTCCAAATGAACGCACGTGATGCGGAAGTGGTTGAGGTTGGAAGGCAGAAACTCCGAACGCCTGGCAGACGGATTTGtgccaaaagagaaaaagaacaaaaaacacgCAAGAAGAACAGCAGCATAGAGAAAACAAACGAATGCTTCCCTCACTTccagattattttttattttattattttccatcgTGTTGAGGAGGAACCCATCTTCTCCCGGTACTGCGTTCCATCGAGCGACTCGACACTTTAAGCGACGTGAAGGAGAACCCGCTGCGTTTGCCTTCAGTACGGTTCACTTTAAGttcttttctttgcctttaCCTTCGTggcctttctttttattttcctcgTCGTTATCCGTGCGGCTGTCGCTCTCCTCTCGCCCACGCTGAGGCCTtctttatttctaataaaatcATGTCTTTTCTTTCTGACTTTCATCTGCGATAAGGAGAAAAtgcacattttgttttcttgatGCTGTTTCTTCTTTTGAGAAAGTCTTAtataaacttttatattttaatgtacggaaaatgcatttatgtgtgcaaattttattaaaaaagaatatt
>XM_034297988.1
gtgtgtgtaacggagcagcagcagcagcagcagcggccACATCACACAGCTCTTCTCCTCCGCTACATTGTCGCCGCTCTGCTTTCATCTCGCGCGGGGACGTAACGGAGCGCGAGGCGAGCGGGGGGACATTGTGCGCGCGAGCCGTGCCGTGTCTCGCCACTGAGCCGTTTAAAGCCGCGTTTTCTGTTTCAGcgtcattttgtttttgttttgtttttttttccctctgaagCTCGCAGCTCCTTCAACTCCACTGAGCTGgagagttattattattattattatttttactttatttattactctttttttttctttttcttttttcattctccaGCCCTCAGTCTCCGGGAGGATCACGAGGCggaaataaagtttataaatgGtcaagtcaaagtcgaaagtggagGCTGTAGTGGAGTTTGACTACCAGGCCCAGCACGATGACGAGTTGACCATCGCCATCGgtgacatcatcagcaacatcagGAAGGATGAGGGGGGCTGGTGGGAGGGCGAGGTGGACGGCCGGAGGGGCCTGTTTCCAGACAACTTCGTCAGGGAGATTAAAAAGGAGGTGAAGAAGGAGCTCAGCTCGGCCTCCCAAGTGGCCAAATCGGATCTGTCCAACGGCAGCGCCAGTCCCGGATCAGAATCCAGCCTCAGACCAGCCAAGAAAGGAGAGGCCATACGGAAGAGACGCTGCAAAGCCGCCTTTAGCTACATCCCGCAGAATGAAGACGAGCTGGAGCTCAAGATCGGAGACGTCATCGAGGTCCTGGGAGAGGTGGAGGAGGGCTGGTGGGAAGGATGTCTCAACGGCAAGACCGGAATGTTCCCTTCCAACTTCACTGTACAGCTGCCGGCCGACACGGAGGATCTGACGTCCCCACCTGAGGACACACGCAGCACACGGACCAgtgtgaagGACAGCACGGGCTCGGAGAGTGACGGAGGAGACAGTAGCAGCATTCGTTCAGACGCAGGCAGCGTCGCCTCCAGCAGCGAAATTCAGCCCAAGAAGGTGCGCGGCTTCGGATTCGGAGACATCTTCAAAGATCAGCCCATTAAGCTCCGCCCACGATCCATGGACCTCGACAGCGAACTGGAGAAGCTGACAGTGAAGAAAGCAGCGCCGTCTGTTCCTCAGGAAACCATGAAGACGGAACCTGAAAACAAGGCCAAAGTGAAGGAGCTCTGTAAAGTGTTATTCCCGTACGACGCCCAGAACGAGGACGAGCTGTCAATCAAGGAGGGAGACATCGTTACCATCGTCAGTaaggagtgtgccGATGCAGGCTGGTGGCTCGGCGAGCTGAACGGTAAACAGGGTGTGTTTCCCGACAACTTTGTGAAGCTCTTTGTTCCCGAGGTGGAGAAAGAGaggcCTAAGAAACCGCCTCCTCCTGCAGCACCCACTACTAAACCCATCACAGACAAAAAGCCAGAGGTTAAAAAGGTTCCTCCCGAGCGGCCCGAGTCTCTTCCGCAGCGAGCCGAGGAGAAAGGTGATGAAATCAAGTTGGTTGAGTTCCAGAAGCCGGTGCTTCCCATCTTTCCACCGAAGAAGCCTTTACCCCCGAAGAGCAACAACTCCCTGACCCGACCCCCTAAACGACCCGAGCGACCCGAGAGACCCGAGAGACCGGCCGCGCCCAGCGCACAgtgtgacAGTTCTGGTGTAGCTTCAGATCGGACGTCCTCAGACAAATCAGCTGAAATCGACGACTTCGACTCCATCGTCTCCTCCACAGAGAAGCTGAGCCACCCCACTGCCTCCAGACCTCGAGTCACAGACCGCCGACCTCGCTCTCAGATCTTCACAtcttcctctctctccagctctgacCTCCTGGACTCGCTGTCTCCGGAGGacgaacagagagagagggagaaggggaAGGACGAGCCGGACTCATTCCCTCCCAGATCTCTCGACAACACCAGGAAGATGCCCAAGGCACTGCCCATCATCACAGCTCCTGAGAAGTCCTCCAAACCCTCATCTCTGACCACAACTCCAGGTGCCGCTGCCCTCAGGCCTCACTCTCCCTCCATTGAGGCCAAGATGAAGAGCGAGCAGGGTTCCACCGTGCTGGAGGAGCTCAGAGCTCAACTACGAGAGCTGAGGGCCACCGTGGAGCTGATGAAGAGCCAGCACAAACAAGAGATGAAACAGCTTGTGAGCGAACTAGATGAGGAGAAAAAGATCCGCTTATCCCTGCAGatggATGTCGAGAACATAAAGAAGGTTCTGTCCAAATGAACGCACGTGATGCGGAAGTGGTTGAGGTTGGAAGGCAGAAACTCCGAACGCCTGGCAGACGGATTTGtgccaaaagagaaaaagaacaaaaaacacgCAAGAAGAACAGCAGCATAGAGAAAACAAACGAATGCTTCCCTCACTTccagattattttttattttattattttccatcgTGTTGAGGAGGAACCCATCTTCTCCCGGTACTGCGTTCCATCGAGCGACTCGACACTTTAAGCGACGTGAAGGAGAACCCGCTGCGTTTGCCTTCAGTACGGTTCACTTTAAGttcttttctttgcctttaCCTTCGTggcctttctttttattttcctcgTCGTTATCCGTGCGGCTGTCGCTCTCCTCTCGCCCACGCTGAGGCCTtctttatttctaataaaatcATGTCTTTTCTTTCTGACTTTCATCTGCGATAAGGAGAAAAtgcacattttgttttcttgatGCTGTTTCTTCTTTTGAGAAAGTCTTAtataaacttttatattttaatgtacggaaaatgcatttatgtgtgcaaattttattaaaaaagaatattC
>XM_034297990.1
tgtgtgtaacggagcagcagcagcagcagcagcggccACATCACACAGCTCTTCTCCTCCGCTACATTGTCGCCGCTCTGCTTTCATCTCGCGCGGGGACGTAACGGAGCGCGAGGCGAGCGGGGGGACATTGTGCGCGCGAGCCGTGCCGTGTCTCGCCACTGAGCCGTTTAAAGCCGCGTTTTCTGTTTCAGcgtcattttgtttttgttttgtttttttttccctctgaagCTCGCAGCTCCTTCAACTCCACTGAGCTGgagagttattattattattattatttttactttatttattactctttttttttctttttcttttttcattctccaGCCCTCAGTCTCCGGGAGGATCACGAGGCggaaataaagtttataaatgGtggagGCTGTAGTGGAGTTTGACTACCAGGCCCAGCACGATGACGAGTTGACCATCGCCATCGgtgacatcatcagcaacatcagGAAGGATGAGGGGGGCTGGTGGGAGGGCGAGGTGGACGGCCGGAGGGGCCTGTTTCCAGACAACTTCGTCAGGGAGATTAAAAAGGAGGTGAAGAAGGAGCTCAGCTCGGCCTCCCAAGTGGCCAAATCGGATCTGTCCAACGGCAGCGCCAGTCCCGGATCAGAATCCAGCCTCAGACCAGCCAAGAAAGGAGAGGCCATACGGAAGAGACGCTGCAAAGCCGCCTTTAGCTACATCCCGCAGAATGAAGACGAGCTGGAGCTCAAGATCGGAGACGTCATCGAGGTCCTGGGAGAGGTGGAGGAGGGCTGGTGGGAAGGATGTCTCAACGGCAAGACCGGAATGTTCCCTTCCAACTTCACTGTACAGCTGCCGGCCGACACGGAGGATCTGACGTCCCCACCTGAGGACACACGCAGCACACGGACCAgtgtgaagGACAGCACGGGCTCGGAGAGTGACGGAGGAGACAGTAGCAGCATTCGTTCAGACGCAGGCAGCGTCGCCTCCAGCAGCGAAATTCAGCCCAAGAAGGTGCGCGGCTTCGGATTCGGAGACATCTTCAAAGATCAGCCCATTAAGCTCCGCCCACGATCCATGGACCTCGACAGCGAACTGGAGAAGCTGACAGTGAAGAAAGCAGCGCCGTCTGTTCCTCAGGAAACCATGAAGACGGAACCTGAAAACAAGGCCAAAGTGAAGGAGCTCTGTAAAGTGTTATTCCCGTACGACGCCCAGAACGAGGACGAGCTGTCAATCAAGGAGGGAGACATCGTTACCATCGTCAGTaaggagtgtgccGATGCAGGCTGGTGGCTCGGCGAGCTGAACGGTAAACAGGGTGTGTTTCCCGACAACTTTGTGAAGCTCTTTGTTCCCGAGGTGGAGAAAGAGaggcCTAAGAAACCGCCTCCTCCTGCAGCACCCACTACTAAACCCATCACAGACAAAAAGCCAGAGGTTAAAAAGGTTCCTCCCGAGCGGCCCGAGTCTCTTCCGCAGCGAGCCGAGGAGAAAGGTGATGAAATCAAGTTGGTTGAGTTCCAGAAGCCGGTGCTTCCCATCTTTCCACCGAAGAAGCCTTTACCCCCGAAGAGCAACAACTCCCTGACCCGACCCCCTAAACGACCCGAGCGACCCGAGAGACCCGAGAGACCGGCCGCGCCCAGCGCACAgtgtgacAGTTCTGGTGTAGCTTCAGATCGGACGTCCTCAGACAAATCAGCTGAAATCGATATAGACGACTTCGACTCCATCGTCTCCTCCACAGAGAAGCTGAGCCACCCCACTGCCTCCAGACCTCGAGTCACAGACCGCCGACCTCGCTCTCAGATCTTCACAtcttcctctctctccagctctgacCTCCTGGACTCGCTGTCTCCGGAGGacgaacagagagagagggagaaggggaAGGACGAGCCGGACTCATTCCCTCCCAGATCTCTCGACAACACCAGGAAGATGCCCAAGGCACTGCCCATCATCACAGCTCCTGAGAAGTCCTCCAAACCCTCATCTCTGACCACAACTCCAGGTGCCGCTGCCCTCAGGCCTCACTCTCCCTCCATTGAGGCCAAGATGAAGAGCGAGCAGGGTTCCACCGTGCTGGAGGAGCTCAGAGCTCAACTACGAGAGCTGAGGGCCACCGTGGAGCTGATGAAGAGCCAGCACAAACAAGAGATGAAACAGCTTGTGAGCGAACTAGATGAGGAGAAAAAGATCCGCTTATCCCTGCAGatggATGTCGAGAACATAAAGAAGGTTCTGTCCAAATGAACGCACGTGATGCGGAAGTGGTTGAGGTTGGAAGGCAGAAACTCCGAACGCCTGGCAGACGGATTTGtgccaaaagagaaaaagaacaaaaaacacgCAAGAAGAACAGCAGCATAGAGAAAACAAACGAATGCTTCCCTCACTTccagattattttttattttattattttccatcgTGTTGAGGAGGAACCCATCTTCTCCCGGTACTGCGTTCCATCGAGCGACTCGACACTTTAAGCGACGTGAAGGAGAACCCGCTGCGTTTGCCTTCAGTACGGTTCACTTTAAGttcttttctttgcctttaCCTTCGTggcctttctttttattttcctcgTCGTTATCCGTGCGGCTGTCGCTCTCCTCTCGCCCACGCTGAGGCCTtctttatttctaataaaatcATGTCTTTTCTTTCTGACTTTCATCTGCGATAAGGAGAAAAtgcacattttgttttcttgatGCTGTTTCTTCTTTTGAGAAAGTCTTAtataaacttttatattttaatgtacggaaaatgcatttatgtgtgcaaattttattaaaaaagaatatt
>XM_034297991.1
gtgtgtgtaacggagcagcagcagcagcagcagcggccACATCACACAGCTCTTCTCCTCCGCTACATTGTCGCCGCTCTGCTTTCATCTCGCGCGGGGACGTAACGGAGCGCGAGGCGAGCGGGGGGACATTGTGCGCGCGAGCCGTGCCGTGTCTCGCCACTGAGCCGTTTAAAGCCGCGTTTTCTGTTTCAGcgtcattttgtttttgttttgtttttttttccctctgaagCTCGCAGCTCCTTCAACTCCACTGAGCTGgagagttattattattattattatttttactttatttattactctttttttttctttttcttttttcattctccaGCCCTCAGTCTCCGGGAGGATCACGAGGCggaaataaagtttataaatgGtcaagtcaaagtcgaaagtggagGCTGTAGTGGAGTTTGACTACCAGGCCCAGCACGATGACGAGTTGACCATCGCCATCGgtgacatcatcagcaacatcagGAAGGATGAGGGGGGCTGGTGGGAGGGCGAGGTGGACGGCCGGAGGGGCCTGTTTCCAGACAACTTCGTCAGGGAGATTAAAAAGGAGGTGAAGAAGGAGCTCAGCTCGGCCTCCCAAGTGGCCAAATCGGATCTGTCCAACGGCAGCGCCAGTCCCGGATCAGAATCCAGCCTCAGACCAGCCAAGAAAGGAGAGGCCATACGGAAGAGACGCTGCAAAGCCGCCTTTAGCTACATCCCGCAGAATGAAGACGAGCTGGAGCTCAAGATCGGAGACGTCATCGAGGTCCTGGGAGAGGTGGAGGAGGGCTGGTGGGAAGGATGTCTCAACGGCAAGACCGGAATGTTCCCTTCCAACTTCACTGTACAGCTGCCGGCCGACACGGAGGATCTGACGTCCCCACCTGAGGACACACGCAGCACACGGACCAgtgtgaagGACAGCACGGGCTCGGAGAGTGACGGAGGAGACAGTAGCAGCATTCGTTCAGACGCAGGCAGCGTCGCCTCCAGCAGCGAAATTCAGCCCAAGAAGGTGCGCGGCTTCGGATTCGGAGACATCTTCAAAGATCAGCCCATTAAGCTCCGCCCACGATCCATGGACCTCGACAGCGAACTGGAGAAGCTGACAGTGAAGAAAGCAGCGCCGTCTGTTCCTCAGGAAACCATGAAGACGGAACCTGAAAACAAGGCCAAAGTGAAGGAGCTCTGTAAAGTGTTATTCCCGTACGACGCCCAGAACGAGGACGAGCTGTCAATCAAGGAGGGAGACATCGTTACCATCGTCAGTaaggagtgtgccGATGCAGGCTGGTGGCTCGGCGAGCTGAACGGTAAACAGGGTGTGTTTCCCGACAACTTTGTGAAGCTCTTTGTTCCCGAGGTGGAGAAAGAGaggcCTAAGAAACCGCCTCCTCCTGCAGCACCCACTACTAAACCCATCACAGGTGATGAAATCAAGTTGGTTGAGTTCCAGAAGCCGGTGCTTCCCATCTTTCCACCGAAGAAGCCTTTACCCCCGAAGAGCAACAACTCCCTGACCCGACCCCCTAAACGACCCGAGCGACCCGAGAGACCCGAGAGACCGGCCGCGCCCAGCGCACAgtgtgacAGTTCTGGTGTAGCTTCAGATCGGACGTCCTCAGACAAATCAGCTGAAATCGATATAGACGACTTCGACTCCATCGTCTCCTCCACAGAGAAGCTGAGCCACCCCACTGCCTCCAGACCTCGAGTCACAGACCGCCGACCTCGCTCTCAGATCTTCACAtcttcctctctctccagctctgacCTCCTGGACTCGCTGTCTCCGGAGGacgaacagagagagagggagaaggggaAGGACGAGCCGGACTCATTCCCTCCCAGATCTCTCGACAACACCAGGAAGATGCCCAAGGCACTGCCCATCATCACAGCTCCTGAGAAGTCCTCCAAACCCTCATCTCTGACCACAACTCCAGGTGCCGCTGCCCTCAGGCCTCACTCTCCCTCCATTGAGGCCAAGATGAAGAGCGAGCAGGGTTCCACCGTGCTGGAGGAGCTCAGAGCTCAACTACGAGAGCTGAGGGCCACCGTGGAGCTGATGAAGAGCCAGCACAAACAAGAGATGAAACAGCTTGTGAGCGAACTAGATGAGGAGAAAAAGATCCGCTTATCCCTGCAGatggATGTCGAGAACATAAAGAAGGTTCTGTCCAAATGAACGCACGTGATGCGGAAGTGGTTGAGGTTGGAAGGCAGAAACTCCGAACGCCTGGCAGACGGATTTGtgccaaaagagaaaaagaacaaaaaacacgCAAGAAGAACAGCAGCATAGAGAAAACAAACGAATGCTTCCCTCACTTccagattattttttattttattattttccatcgTGTTGAGGAGGAACCCATCTTCTCCCGGTACTGCGTTCCATCGAGCGACTCGACACTTTAAGCGACGTGAAGGAGAACCCGCTGCGTTTGCCTTCAGTACGGTTCACTTTAAGttcttttctttgcctttaCCTTCGTggcctttctttttattttcctcgTCGTTATCCGTGCGGCTGTCGCTCTCCTCTCGCCCACGCTGAGGCCTtctttatttctaataaaatcATGTCTTTTCTTTCTGACTTTCATCTGCGATAAGGAGAAAAtgcacattttgttttcttgatGCTGTTTCTTCTTTTGAGAAAGTCTTAtataaacttttatattttaatgtacggaaaatgcatttatgtgtgcaaattttattaaaaaagaatattC
>XM_034297992.1
AAACTCAACTCAGACCTTTAATTGAATTATTCCTAATTTCTCTAAATTATTACCCAGgaatattataaatgtttatggaaTAACTTGAACACAGTAACTCTGGCAGGAAATGATGATCCACGATGATGAACTTCAACACGGGGGAGATTAAAAAGGAGGTGAAGAAGGAGCTCAGCTCGGCCTCCCAAGTGGCCAAATCGGATCTGTCCAACGGCAGCGCCAGTCCCGGATCAGAATCCAGCCTCAGACCAGCCAAGAAAGGAGAGGCCATACGGAAGAGACGCTGCAAAGCCGCCTTTAGCTACATCCCGCAGAATGAAGACGAGCTGGAGCTCAAGATCGGAGACGTCATCGAGGTCCTGGGAGAGGTGGAGGAGGGCTGGTGGGAAGGATGTCTCAACGGCAAGACCGGAATGTTCCCTTCCAACTTCACTGTACAGCTGCCGGCCGACACGGAGGATCTGACGTCCCCACCTGAGGACACACGCAGCACACGGACCAgtgtgaagGACAGCACGGGCTCGGAGAGTGACGGAGGAGACAGTAGCAGCATTCGTTCAGACGCAGGCAGCGTCGCCTCCAGCAGCGAAATTCAGCCCAAGAAGGTGCGCGGCTTCGGATTCGGAGACATCTTCAAAGATCAGCCCATTAAGCTCCGCCCACGATCCATGGACCTCGACAGCGAACTGGAGAAGCTGACAGTGAAGAAAGCAGCGCCGTCTGTTCCTCAGGAAACCATGAAGACGGAACCTGAAAACAAGGCCAAAGTGAAGGAGCTCTGTAAAGTGTTATTCCCGTACGACGCCCAGAACGAGGACGAGCTGTCAATCAAGGAGGGAGACATCGTTACCATCGTCAGTaaggagtgtgccGATGCAGGCTGGTGGCTCGGCGAGCTGAACGGTAAACAGGGTGTGTTTCCCGACAACTTTGTGAAGCTCTTTGTTCCCGAGGTGGAGAAAGAGaggcCTAAGAAACCGCCTCCTCCTGCAGCACCCACTACTAAACCCATCACAGACAAAAAGCCAGAGGTTAAAAAGGTTCCTCCCGAGCGGCCCGAGTCTCTTCCGCAGCGAGCCGAGGAGAAAGGTGATGAAATCAAGTTGGTTGAGTTCCAGAAGCCGGTGCTTCCCATCTTTCCACCGAAGAAGCCTTTACCCCCGAAGAGCAACAACTCCCTGACCCGACCCCCTAAACGACCCGAGCGACCCGAGAGACCCGAGAGACCGGCCGCGCCCAGCGCACAgtgtgacAGTTCTGGTGTAGCTTCAGATCGGACGTCCTCAGACAAATCAGCTGAAATCGATATAGACGACTTCGACTCCATCGTCTCCTCCACAGAGAAGCTGAGCCACCCCACTGCCTCCAGACCTCGAGTCACAGACCGCCGACCTCGCTCTCAGATCTTCACAtcttcctctctctccagctctgacCTCCTGGACTCGCTGTCTCCGGAGGacgaacagagagagagggagaaggggaAGGACGAGCCGGACTCATTCCCTCCCAGATCTCTCGACAACACCAGGAAGATGCCCAAGGCACTGCCCATCATCACAGCTCCTGAGAAGTCCTCCAAACCCTCATCTCTGACCACAACTCCAGGTGCCGCTGCCCTCAGGCCTCACTCTCCCTCCATTGAGGCCAAGATGAAGAGCGAGCAGGGTTCCACCGTGCTGGAGGAGCTCAGAGCTCAACTACGAGAGCTGAGGGCCACCGTGGAGCTGATGAAGAGCCAGCACAAACAAGAGATGAAACAGCTTGTGAGCGAACTAGATGAGGAGAAAAAGATCCGCTTATCCCTGCAGatggATGTCGAGAACATAAAGAAGGTTCTGTCCAAATGAACGCACGTGATGCGGAAGTGGTTGAGGTTGGAAGGCAGAAACTCCGAACGCCTGGCAGACGGATTTGtgccaaaagagaaaaagaacaaaaaacacgCAAGAAGAACAGCAGCATAGAGAAAACAAACGAATGCTTCCCTCACTTccagattattttttattttattattttccatcgTGTTGAGGAGGAACCCATCTTCTCCCGGTACTGCGTTCCATCGAGCGACTCGACACTTTAAGCGACGTGAAGGAGAACCCGCTGCGTTTGCCTTCAGTACGGTTCACTTTAAGttcttttctttgcctttaCCTTCGTggcctttctttttattttcctcgTCGTTATCCGTGCGGCTGTCGCTCTCCTCTCGCCCACGCTGAGGCCTtctttatttctaataaaatcATGTCTTTTCTTTCTGACTTTCATCTGCGATAAGGAGAAAAtgcacattttgttttcttgatGCTGTTTCTTCTTTTGAGAAAGTCTTAtataaacttttatattttaatgtacggaaaatgcatttatgtgtgcaaattttattaaaaaagaatatt

Function

symbol description
sh3kbp1 Acts upstream of or within blood vessel lumenization. Is expressed in axial blood vessel; caudal vein plexus; intermediate mesoderm; and notochord. Human ortholog(s) of this gene implicated in immunodeficiency 61. Orthologous to human SH3KBP1 (SH3 domain containing kinase binding protein 1).

NR:

description
PREDICTED: SH3 domain-containing kinase-binding protein 1

GO: NA

KEGG:

id description
K12470 SH3KBP1, CIN85; SH3 domain-containing kinase-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034297987.1 True 2839 mRNA 0.52 19 20050736 20112390
XM_034297988.1 False 2834 mRNA 0.52 19 20050736 20112391
XM_034297990.1 False 2820 mRNA 0.52 18 20050737 20112390
XM_034297991.1 False 2768 mRNA 0.52 18 20050736 20112391
XM_034297992.1 False 2417 mRNA 0.51 17 20080226 20112390

Neighbor

gene id symbol gene type direction distance location
LOC113541169 klhl34 coding upstream 163179 19884047 ~ 19887557 (+)
LOC113541258 LOC108256477,LOC108439743,LOC107705271,LOC107721848,LOC107590344,LOC107586729,LOC107671347 coding upstream 300681 19740057 ~ 19750055 (+)
amer2 amer2 coding upstream 446966 19600565 ~ 19603770 (+)
mtmr6 mtmr6,LOC107721921,LOC107705267,LOC107590218 coding upstream 457284 19579310 ~ 19593452 (+)
pcyt1ba pcyt1b,LOC107721854,LOC107590340,LOC107586799,LOC107705205 coding upstream 544200 19498302 ~ 19506536 (+)
map3k15 map3k15,LOC107685453 coding downstream 3623 20116014 ~ 20152049 (+)
LOC113541177 NA coding downstream 52376 20164767 ~ 20167147 (+)
tfr1b NA coding downstream 60709 20173100 ~ 20188652 (+)
tnk2a LOC108256568,LOC108440396,LOC107685449,LOC107725874 coding downstream 81669 20194060 ~ 20207270 (+)
tmtopsb tmtopsb,LOC108256142,LOC108440411,LOC107586803,LOC107685448 coding downstream 103703 20216094 ~ 20228940 (+)
G335345 NA non-coding upstream 21245 19965544 ~ 20029491 (+)
G335243 NA non-coding upstream 225825 19824703 ~ 19824911 (+)
G335215 NA non-coding upstream 282393 19767463 ~ 19768343 (+)
G335214 NA non-coding upstream 283910 19766470 ~ 19766826 (+)
G334888 NA non-coding upstream 343730 19704685 ~ 19707006 (+)
G335381 NA non-coding downstream 62387 20174778 ~ 20189323 (+)
G335383 NA non-coding downstream 95133 20207524 ~ 20208617 (+)
G335558 NA non-coding downstream 148180 20260571 ~ 20260807 (+)
G335563 eif5a2,eif5a,LOC107685442,LOC107590245,LOC107586748 non-coding downstream 173690 20286081 ~ 20371855 (+)
G335582 NA non-coding downstream 188195 20300586 ~ 20300899 (+)
camk2n2 camk2n2,LOC108256106,LOC107590228,LOC108443638,LOC103024774,LOC107586800 other upstream 62700 19985332 ~ 19988036 (+)
smpx smpx,LOC107590224,LOC107663668,LOC107721880,LOC107705278,LOC107671350 other upstream 167900 19870381 ~ 19882836 (+)
G335231 NA other upstream 261678 19788583 ~ 19789058 (+)
cip2a kiaa1524 other upstream 346932 19636868 ~ 19703804 (+)
si:ch73-264p11.1 sh21b other upstream 366866 19678481 ~ 19683870 (+)
ccl20b NA other downstream 47876 20160267 ~ 20163106 (+)
mynn mynn other downstream 149477 20261868 ~ 20270565 (+)
lrrc34 lrrc34 other downstream 161729 20274120 ~ 20281252 (+)
vipr2 vipr2,LOC107656837 other downstream 632358 20744749 ~ 20764373 (+)

Expression


Co-expression Network