tmem245 (tmem245,LOC107706205,LOC107687814,LOC107723436,LOC107595951)


Basic Information

Item Value
gene id tmem245
gene name tmem245,LOC107706205,LOC107687814,LOC107723436,LOC107595951
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 7426279 ~ 7451187 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034298069.1
CACGTGCAGCCTAACAGCCTGACACTGCATTACCCAGTGTGCTCGCAGCAAGCTAcgtcacatttttttcctacGTCCGCAATTCTTCAAGTGTGTTTACGGTGCAGAGCAGGCAGGAGTGTAGAGCAGAGCAGAGAAGAGCAGAACAGCGAACATGGCAGACGCGGAGGGTCCGGATCTGGACGGGGATCCGGTGACTCCCGCCGCTCGTGTGGCTCGCGCTCCCCGGGTGTCGTTTGGGGAGTCGGGGCAGCCCGCAGTCGGTGTGGTTGGCCATCTGCTGGGTCAACAGCCGTCTCTGAAGTTTGACAAGAACATCAAGCAGGCCTTCTACAACACTGGCGCCATGATCTTCGTGGCGATTTGCTGCGGCGCCGCGGTGCTTGTGTACTTCATCCTCGAGGCGTTCCTGCGGCCGCTGCTCTGGGCCGTGCTGTGCGGAACCTTCCTGCACCCGTTCAAGCACTCTCTGGCGCGCGTGGGACGCTCGTGGCTCAGCGGGCTCCGGGCCAGCGGCACGCCCATCGTGCTGGGGACACTGCTCGTGCCGGTCCGCTGTGTGAACCACGGTGTGGAGACTCTGGGAGCTCTGCTGCTCGAGCGCCTCAAGGTGCTGCTGGTGATCGGGGCCGGTGCGCCGCTCCTCTACTTCCTTTACCTGTTCTGGAGCGTCATCGGCATGCAGGCTGTGCTCGAGCACCTTTGTGACGTCATATGCCACGTGCTCGACTGCTTCAGCGCTTTGtggGTTGGAACATTAGTGGTGGGTTACGTGCTGGCTGTGGTGTTTAAGTGGACACCGGGTATGGAAGTTTACCTGCGCGCCATGTCTGTGCCCATTTGGACGGTTCTTATATTCTACCTGGTGTCTCTGACAGGAGCCTGGCGAGTGCCCATGTTTGTGGTGGTGGTCATTCTGCTAATAGTGGGCTCTCAGGAGAAAGCACCGGTCCCAGGAAAAGGGGAACTGCCAGGACAGGTCCTTTCCTTTGCTGCTAACACTATCTACATGGCCATCACCTGCAGTAACCACCGGCCTATGGCTGAGAATGATGAAGAGAGCAATGCCAAAACACAATCTAAAGACGACTCCAAAATGGGTGAGGTTTTCACCACACCGCTGCGTCCTCGCCCGGATTTCCAGAGTCTTGCACACAAGGAGAAAGCCAGCGATATCTATTTTGTGCTGCTGGTGTGGGCCATAGTGCTGGTGCAGATCTGGCTCAACCTCTGGATCATGCAGCTGTTGCCTATCCCTTTTGCTGTGTGGGTAATTAAGAGGTTGGTGGTGCATTTCGGGGTGAAGAATTTCGCCGAGCGGACGTTAGCAGCATGGTGGGTGGTGCTGGAGAGGTTtatcagagacagacaggatgCTCTGCTGCCTGGACCAATCAAAGGACTGGCACAGTTTCTACTGCGGGTTGATACGAAGCTCTGGCATTGGCTTAACAAGCAGATGATCATATGGTTGGAGAAATCTCTGGATAAACTCATcagcatcttcatcatctttcTTCTGGTCACAGGGACACTCCTCATGGCCCTCTTGCTCACTGCTATGGTGCATCATGAAAGTGCTCATATCATAGAGGTCACCAGCAACCTGATCAACGAGACTCTCGCCAACCACCCTGAGTGGGCTAACTGGCTTCCAGAGGCTCGCGTTGTTCAGAAAGCTCTTAACTCCGCAGCCACAAACGTGTACCAGCATGGGAGAGAGTGGATAACTCAAAAGcTTCACAAGATGCTTGGTGAGAAAGTGAACAACACTGCAGTGATCGAGAAGCAGGTTCTGGAGCTGTGGGACAGACTTTACCActcatggtttgtcaagAACGTAACATACAGCGGACGCCACCGTGGCCACAAGCAACATCTGCAGAGGCAGCACAGCTGGCTGGGAGACATACTGGACTGGCAGGATATTGTCTCCTTCCTGCAAGACAACATCGAAACACTGCTAtcgattgtgGAGTCTCTCTGGGTTGTGATGAGCCGGAATGTTGGTTTGCTGATCTCCACAACAACGACGCTGCTCACTGTACTGTTCCACAGCGGCACGGCACTGCTCAACTTTGTCCTCTCActggTGATTTTCCTGACCACACTGTTCTACTTACTGAGCTCCAGTGGTGAGTACTACAAGCCCGTTAAATGGGTGATCAGTCTCACACCCCTGTCCCAGCCTGGACCTTCATCCAACATCGTCGGCCAGTCTGTGGAGGAGGCCATcagaggtGTGTTTGATGCATCTCTAAAGATGGCAGGATTTTACGGCCTCTACACCtggctcacacacaccatctttGGCATCAACATCGTCTTCATCCCCTCAGcGCTGGCAGCCATTCTTGGTGCCGTGCCGTTTTTGGGTACGTACTGGGCAGCGTTGCCTGCTGTGCTCGATCTGTGGCTGGCACAAGGTGAAGGTGTTAAAgccctgctgctgctcctggcACACCTGCTGCCGACCTACTTCGTCGATACAGCAATTTACTCGGATatatcaggtGGGGGTCATCCTTATCTGACAGGCCTAGCTGTGGCTGGTGGAGCATACTATTTGGGTTTAGAAGGGGCCATCATAGGCCCGATCCTGCTCTGCATTCTGGTGGTAGCATCCAACATCTACAGTGCCATGCTGATGAGCCCGAGCAGCAGCCAACCAACACCAGTGCAAAGCAACTTCCCTCAACACTTGGGcagGCCGTTCCTGGACTCTCCTCTGCTGCTGAAAAGAGTGACCGAGTGAAAGAAGCCCGAGCTGCTTTCCCGCCCGCTCTGCTGTTACTCGGCCCTCACTCCTCTGACGAGCCCGAGTTTGGAACCTCCTCCAAAAGGACACAGAAGTCTCGGCCACTGAAACTGTACCTGGAGGGCTGATGAGCTCCGGATCAGCTCGGGATCAGTGTAAAATGCTATTGAAGTCGCTCAGTGATAATGCTAAGCTTCCAGAGCCTGGGTTCTTTGAGTGCAATATAATTTACACTACTAACACCTGAGCGCAAAGTTCAGTTAGCAGGATTGTGTCTCGTCTAGCATAGTGGCTACAAACTCCACTAGCACTCTATGATTGTTAGAGTAATTGTTTGCACACAGCGCTTGACTGTAAAACTCACAACTGctccattttcactgtttttattattacagttgcAGTTTTTCCATTTGAGTTTTCTCcatgttaatgaaatatttatataatataatgtgacaGTGACCTTGCTATGTACAGcactgccgtgtgtgtgtgtacgtgtgtgggATTGCTAccttttgattattatttacatgttgAACATTGTTCTCGTTTAGTGAACGTACGGTTAAGTCTTATCACATATCGTCATAACTCCATAAGCACTATTCTTGTAcacacttgtgtgtttgtgtgtgtgtttttatatcttagtgGGGACCAAATCCCCACAATGCTAGGAATATCTGAcggttttgaccttgtggggacattttgcTGGTTCCCACAAgaaaaactgcttttatttt
>XM_034298070.1
ACGTGCAGCCTAACAGCCTGACACTGCATTACCCAGTGTGCTCGCAGCAAGCTAcgtcacatttttttcctacGTCCGCAATTCTTCAAGTGTGTTTACGGTGCAGAGCAGGCAGGAGTGTAGAGCAGAGCAGAGAAGAGCAGAACAGCGAACATGGCAGACGCGGAGGGTCCGGATCTGGACGGGGATCCGGTGACTCCCGCCGCTCGTGTGGCTCGCGCTCCCCGGGTGTCGTTTGGGGAGTCGGGGCAGCCCGCAGTCGGTGTGGTTGGCCATCTGCTGGGTCAACAGCCGTCTCTGAAGTTTGACAAGAACATCAAGCAGGCCTTCTACAACACTGGCGCCATGATCTTCGTGGCGATTTGCTGCGGCGCCGCGGTGCTTGTGTACTTCATCCTCGAGGCGTTCCTGCGGCCGCTGCTCTGGGCCGTGCTGTGCGGAACCTTCCTGCACCCGTTCAAGCACTCTCTGGCGCGCGTGGGACGCTCGTGGCTCAGCGGGCTCCGGGCCAGCGGCACGCCCATCGTGCTGGGGACACTGCTCGTGCCGGTCCGCTGTGTGAACCACGGTGTGGAGACTCTGGGAGCTCTGCTGCTCGAGCGCCTCAAGGTGCTGCTGGTGATCGGGGCCGGTGCGCCGCTCCTCTACTTCCTTTACCTGTTCTGGAGCGTCATCGGCATGCAGGCTGTGCTCGAGCACCTTTGTGACGTCATATGCCACGTGCTCGACTGCTTCAGCGCTTTGtggGTTGGAACATTAGTGGTGGGTTACGTGCTGGCTGTGGTGTTTAAGTGGACACCGGGTATGGAAGTTTACCTGCGCGCCATGTCTGTGCCCATTTGGACGGTTCTTATATTCTACCTGGTGTCTCTGACAGGAGCCTGGCGAGTGCCCATGTTTGTGGTGGTGGTCATTCTGCTAATAGTGGGCTCTCAGGAGAAAGCACCGGTCCCAGGAAAAGGGGAACTGCCAGGACAGGTCCTTTCCTTTGCTGCTAACACTATCTACATGGCCATCACCTGCAGTAACCACCGGCCTATGGCTGAGAATGATGAAGAGAGCAATGCCAAAACACAATCTAAAGACGACTCCAAAATGGGTGAGGTTTTCACCACACCGCTGCGTCCTCGCCCGGATTTCCAGAGTCTTGCACACAAGGAGAAAGCCAGCGATATCTATTTTGTGCTGCTGGTGTGGGCCATAGTGCTGGTGCAGATCTGGCTCAACCTCTGGATCATGCAGCTGTTGCCTATCCCTTTTGCTGTGTGGGTAATTAAGAGGTTGGTGGTGCATTTCGGGGTGAAGAATTTCGCCGAGCGGACGTTAGCAGCATGGTGGGTGGTGCTGGAGAGGTTtatcagagacagacaggatgCTCTGCTGCCTGGACCAATCAAAGGACTGGCACAGTTTCTACTGCGGGTTGATACGAAGATGATCATATGGTTGGAGAAATCTCTGGATAAACTCATcagcatcttcatcatctttcTTCTGGTCACAGGGACACTCCTCATGGCCCTCTTGCTCACTGCTATGGTGCATCATGAAAGTGCTCATATCATAGAGGTCACCAGCAACCTGATCAACGAGACTCTCGCCAACCACCCTGAGTGGGCTAACTGGCTTCCAGAGGCTCGCGTTGTTCAGAAAGCTCTTAACTCCGCAGCCACAAACGTGTACCAGCATGGGAGAGAGTGGATAACTCAAAAGcTTCACAAGATGCTTGGTGAGAAAGTGAACAACACTGCAGTGATCGAGAAGCAGGTTCTGGAGCTGTGGGACAGACTTTACCActcatggtttgtcaagAACGTAACATACAGCGGACGCCACCGTGGCCACAAGCAACATCTGCAGAGGCAGCACAGCTGGCTGGGAGACATACTGGACTGGCAGGATATTGTCTCCTTCCTGCAAGACAACATCGAAACACTGCTAtcgattgtgGAGTCTCTCTGGGTTGTGATGAGCCGGAATGTTGGTTTGCTGATCTCCACAACAACGACGCTGCTCACTGTACTGTTCCACAGCGGCACGGCACTGCTCAACTTTGTCCTCTCActggTGATTTTCCTGACCACACTGTTCTACTTACTGAGCTCCAGTGGTGAGTACTACAAGCCCGTTAAATGGGTGATCAGTCTCACACCCCTGTCCCAGCCTGGACCTTCATCCAACATCGTCGGCCAGTCTGTGGAGGAGGCCATcagaggtGTGTTTGATGCATCTCTAAAGATGGCAGGATTTTACGGCCTCTACACCtggctcacacacaccatctttGGCATCAACATCGTCTTCATCCCCTCAGcGCTGGCAGCCATTCTTGGTGCCGTGCCGTTTTTGGGTACGTACTGGGCAGCGTTGCCTGCTGTGCTCGATCTGTGGCTGGCACAAGGTGAAGGTGTTAAAgccctgctgctgctcctggcACACCTGCTGCCGACCTACTTCGTCGATACAGCAATTTACTCGGATatatcaggtGGGGGTCATCCTTATCTGACAGGCCTAGCTGTGGCTGGTGGAGCATACTATTTGGGTTTAGAAGGGGCCATCATAGGCCCGATCCTGCTCTGCATTCTGGTGGTAGCATCCAACATCTACAGTGCCATGCTGATGAGCCCGAGCAGCAGCCAACCAACACCAGTGCAAAGCAACTTCCCTCAACACTTGGGcagGCCGTTCCTGGACTCTCCTCTGCTGCTGAAAAGAGTGACCGAGTGAAAGAAGCCCGAGCTGCTTTCCCGCCCGCTCTGCTGTTACTCGGCCCTCACTCCTCTGACGAGCCCGAGTTTGGAACCTCCTCCAAAAGGACACAGAAGTCTCGGCCACTGAAACTGTACCTGGAGGGCTGATGAGCTCCGGATCAGCTCGGGATCAGTGTAAAATGCTATTGAAGTCGCTCAGTGATAATGCTAAGCTTCCAGAGCCTGGGTTCTTTGAGTGCAATATAATTTACACTACTAACACCTGAGCGCAAAGTTCAGTTAGCAGGATTGTGTCTCGTCTAGCATAGTGGCTACAAACTCCACTAGCACTCTATGATTGTTAGAGTAATTGTTTGCACACAGCGCTTGACTGTAAAACTCACAACTGctccattttcactgtttttattattacagttgcAGTTTTTCCATTTGAGTTTTCTCcatgttaatgaaatatttatataatataatgtgacaGTGACCTTGCTATGTACAGcactgccgtgtgtgtgtgtacgtgtgtgggATTGCTAccttttgattattatttacatgttgAACATTGTTCTCGTTTAGTGAACGTACGGTTAAGTCTTATCACATATCGTCATAACTCCATAAGCACTATTCTTGTAcacacttgtgtgtttgtgtgtgtgtttttatatcttagtgGGGACCAAATCCCCACAATGCTAGGAATATCTGAcggttttgaccttgtggggacattttgcTGGTTCCCACAAgaaaaactgcttttatttt

Function

symbol description
tmem245 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM245 (transmembrane protein 245).

NR:

description
transmembrane protein 245

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034298069.1 True 3510 mRNA 0.52 18 7426279 7451187
XM_034298070.1 False 3485 mRNA 0.52 17 7426280 7451187

Neighbor

gene id symbol gene type direction distance location
LOC113532919 frrs1l,LOC107595962 coding upstream 2088 7417374 ~ 7424191 (+)
alg2 alg2,LOC107595974,LOC107706186 coding upstream 35395 7386580 ~ 7390884 (+)
tex10 tex10,LOC107689903 coding upstream 241214 7153823 ~ 7185065 (+)
rbm12ba NA coding upstream 302888 7121016 ~ 7123391 (+)
nacad LOC108256401,LOC107579097 coding upstream 361130 7050652 ~ 7065149 (+)
ino80c ino80c coding downstream 127802 7578989 ~ 7583831 (+)
trim35-28 LOC108256499 coding downstream 439441 7890628 ~ 7897309 (+)
epb41b NA coding downstream 454685 7905872 ~ 7924253 (+)
ptpn3 ptpn3,LOC108256378,LOC108443284,LOC107723490 coding downstream 520431 7971618 ~ 8009770 (+)
epb41l4b epb41l4b,LOC108256379,LOC101068824 coding downstream 558714 8009901 ~ 8045225 (+)
G328441 NA non-coding upstream 33831 7392241 ~ 7392448 (+)
G328427 NA non-coding upstream 52779 7373280 ~ 7373500 (+)
G328313 NA non-coding upstream 157517 7267734 ~ 7268762 (+)
G328260 NA non-coding upstream 289557 7128166 ~ 7136722 (+)
G328222 NA non-coding upstream 381001 7045046 ~ 7045278 (+)
G328620 NA non-coding downstream 205954 7657141 ~ 7659079 (+)
G328750 NA non-coding downstream 654075 8105262 ~ 8105462 (+)
G328754 NA non-coding downstream 683893 8135080 ~ 8135455 (+)
G328755 NA non-coding downstream 684330 8135517 ~ 8136163 (+)
G328944 NA non-coding downstream 765259 8216446 ~ 8216654 (+)
erp44 erp44,LOC107593692,LOC107723539,LOC107706132,LOC107596038 other upstream 179000 7224022 ~ 7247279 (+)
G326997 NA other upstream 2088028 5332268 ~ 5338251 (+)
acbd7 acbd7,LOC108256514 other upstream 2111665 5311209 ~ 5314614 (+)
klf10 LOC108256604 other upstream 2436963 4984415 ~ 4989316 (+)
srsf10a LOC108256391,LOC108426370,LOC101486875 other upstream 2496124 4924781 ~ 4930155 (+)
LOC113532663 NA other downstream 450328 7901515 ~ 7902608 (+)
osr2 osr2,LOC106591507 other downstream 921498 8372685 ~ 8378896 (+)
LOC113532774 vps13b other downstream 937000 8388187 ~ 8550238 (+)
G329111 LOC108426559,LOC103029568,LOC107664665,LOC108256430,LOC107550021,LOC107755710,LOC107742253,LOC107655802 other downstream 1163886 8615073 ~ 8665836 (+)
LOC113532648 ptprh,LOC108256157 other downstream 1317558 8768745 ~ 8821311 (+)

Expression


Co-expression Network