trnay-gua_3


Basic Information

Item Value
gene id trnay-gua_3
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 18379036 ~ 18379121 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnay-gua_3
CCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnay-gua_3 True 73 tRNA 0.55 2 18379036 18379121

Neighbor

gene id symbol gene type direction distance location
pde7a pde7a,LOC107586714 coding downstream 15457 18326095 ~ 18363579 (-)
armc1 armc1,LOC108438805,LOC103047274,LOC107590214 coding downstream 63779 18309173 ~ 18315257 (-)
pdha1b pdha1,LOC108256426 coding downstream 292802 18080263 ~ 18086234 (-)
rps6ka3b LOC108256425,LOC108438828,LOC107590208,LOC107663698 coding downstream 301697 18029514 ~ 18077339 (-)
eif1axb eif1axb,EIF1AX,LOC102359197,LOC106603066,LOC107726370,LOC105905255 coding downstream 352088 18021664 ~ 18026948 (-)
trnay-gua_4 NA coding upstream 528 18379649 ~ 18379734 (-)
crhb LOC108256093 coding upstream 12250 18391371 ~ 18392978 (-)
LOC113541285 tcf24 coding upstream 100558 18479679 ~ 18482400 (-)
ppp1r42 ppp1r42 coding upstream 104266 18483387 ~ 18490581 (-)
cops5 cops5,LOC107590195,LOC107705241,LOC107663714 coding upstream 117042 18496163 ~ 18502082 (-)
G334110 NA non-coding downstream 166907 18211916 ~ 18212129 (-)
G334080 NA non-coding downstream 174811 18203071 ~ 18204225 (-)
G334079 NA non-coding downstream 176136 18141428 ~ 18202900 (-)
LOC113541306 NA non-coding downstream 269966 18107697 ~ 18109070 (-)
G334042 NA non-coding downstream 279750 18094503 ~ 18099286 (-)
G334191 NA non-coding upstream 9732 18388853 ~ 18427075 (-)
G334235 NA non-coding upstream 56637 18435758 ~ 18436522 (-)
G334248 sgk3,LOC107721888,LOC107663688,LOC107705243 non-coding upstream 82835 18461956 ~ 18464554 (-)
LOC113541286 NA non-coding upstream 95545 18474666 ~ 18478793 (-)
G334425 NA non-coding upstream 203352 18582473 ~ 18583025 (-)
zmp:0000000991 NA other downstream 447222 17916084 ~ 17931814 (-)
c22h11orf65 c23h11orf65 other downstream 462480 17909324 ~ 17916556 (-)
LOC113541127 LOC108256571 other downstream 470224 17907584 ~ 17908812 (-)
vipr1b vipr1,vipr1b,LOC108256372,LOC107733233,LOC107754936 other downstream 1139920 17185524 ~ 17239116 (-)
zbtb47b zbtb47,znf652,LOC108256615 other downstream 1239351 17116098 ~ 17139685 (-)
mybl1 mybl1,LOC107663687,LOC107590196 other upstream 58393 18437514 ~ 18520205 (-)
pkia pkia,LOC107666628,LOC107705234 other upstream 626377 19005498 ~ 19015855 (-)
pdk3a pdk3,pdk3a,LOC107586717,LOC107705263,LOC107656160,LOC107663620,LOC107590342,LOC107721912 other upstream 1127967 19507088 ~ 19521331 (-)
nup58 nup58,LOC107721897,LOC107590217 other upstream 1176020 19555141 ~ 19579031 (-)
G335165 amer2 other upstream 1221606 19600727 ~ 19603693 (-)

Expression


Co-expression Network