G347628


Basic Information

Item Value
gene id G347628
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 87567 ~ 125206 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU411864
GTTAGAAACACGCGCGCGCCATGTGGTTTCACTTCTCTTCCTGCTCTCTAAACGGATAACGACctttaaaccttttttattttattattattattattattattattattattattattattattattattattatttcggCCTGTGGTGCTGTAGAGTGGCGGTGTTTGGCTGCTCAGAGGGCTTTTCTTGTGGACTTGCCTCTGCTTTGAGTCAGTGAGAGCTAACAGAGCTAACAGAGCTGGTGTGTAGAAGCTCTTGCTGTGTGTCAGTGCTGGAAGGTGTGTTAGTGCTTTATTCCAGcagtttgtgctacagtagctcttctgtgggatcagaccagacggaccttcactccccacgcgcatcagtgagacttgggagcccatgaccctgtcgccggttcaccggttgtccttccttgttccacttttgaCATGTGGAGCTACACACTTCTGTTCGGGCTGCAGATTTTCACCTTTGCTGCCACTGTGTCTGGTGAACGTTCTGTAACAGCCAAACTTCATCACCCTGCTACTCTCACCTGTGACTGGAAATGTCCTGGTTTGCTCAAATGGAGTTTCAAGTTTCATACGATTGTGGCTCGGTGTGATCAGACATCATGCAGGTCAGAGGAGAGATTTAACATCTCTCATGATCAGTACCTGAAGGGGAATCCACATCTCACCATCACTGCAGCTGATTACAGTACGAGAGGTTTATACACGTGTCAGTGTGATGGCAAAGACGTCTGTGACGTGCGGCTCGTCATTGAGAGTAAGTGTCCTTCTTTTTTCCCACTAAACACTAAGTAGAAGCATTTGAAGGATGACTGATAGAAGTAGGAGGCACCACAACTCGATGGTGAGTGTCATAACAAAGAGCCTGAATAATTatgtcttttaattttaataaatgtacaaaatcttCTTAAAACCCATTTTGCTTTGTCATTGTGGAGTATTGTGTGTAGATTGATGACAAAAGCAATGAGCTGAATCGATTTTAAAATGAGTCTAAAACATACCAGAATGAGGAGAACGGTCTGAAACCTTTGCGTATGCACTGTAAGCTGTccagggttaagggccttgctcaagggcccagcagtggcagcttggtggtgctgggatttgagcttgtgaccttccgatcagtagtctGACATCCACTGAGCTACTATTTCCCTACACACTTTCTGCTCGTATTTCTAATTCCCTAACTTTCCTCTCCTTAGCTCAAGTGATGAGCCGTGAGATTACCCCAGGCGAGCCCATAAACGTGTACTTACCCCTCACTGACCGGGTGGAGGTGAGTTTTACTGCGAGTGATGCTGCACAACCATCAGACCTGCAGATCTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411864 True 1363 TUCP 0.45 4 87567 125206

Neighbor

gene id symbol gene type direction distance location
LOC113524950 NA coding downstream 7217 73680 ~ 80350 (-)
paip1 paip1 coding downstream 16083 61601 ~ 71484 (-)
LOC117595912 NA coding upstream 1784 126990 ~ 134539 (-)
LOC113528268 NA coding upstream 35814 161020 ~ 184551 (-)
LOC113528265 NA coding upstream 96223 221429 ~ 226704 (-)
mybbp1a mybbp1a coding upstream 113611 238817 ~ 254544 (-)
fgf10b NA coding upstream 132321 257527 ~ 260223 (-)
G347634 NA non-coding downstream 52789 17440 ~ 34778 (-)
G347623 NA non-coding upstream 49817 175023 ~ 206293 (-)
G347703 NA non-coding upstream 203708 328914 ~ 329608 (-)
G347704 NA non-coding upstream 208036 333242 ~ 333755 (-)
G347672 NA non-coding upstream 229121 354327 ~ 355340 (-)
G347723 NA non-coding upstream 270161 395367 ~ 397450 (-)
LOC117595911 LOC108255570 other upstream 67343 192549 ~ 201990 (-)
LOC113528266 NA other upstream 80274 205480 ~ 210705 (-)
LOC117595925 NA other upstream 105319 230525 ~ 237272 (-)
LOC113528009 atp5i,atp5ib,atp5ia,LOC107703581 other upstream 238800 364006 ~ 367739 (-)
rusc2 rusc2,LOC108255549 other upstream 293101 418307 ~ 466255 (-)

Expression


Co-expression Network