G347634



Basic Information


Item Value
gene id G347634
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 17440 ~ 34778 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU411870
CTTCCACAGATAGGGTGTATATCTGAATGTCTTCGTTATTCTCCGTGTCCCGGATGGTGTAACTTCCACTATCACTCGGCTGCACGTCTCTCAGTGTAATATTGGGGTGACTGAgtgatgttctgtgtgtgtattcagctTTACACTGTAGTGAGCGTTGAGTCACAGTGCAGATCTGTTCCCCATCAGCTGAATCTCTGCTTTTATAAATCACCTCCACTGGCTCTGGTACGCTCAAATCCAGGATCAGATgttctgtgtgtgtattcagctTTACACTGTAGTGAGCGTTGAGTCACAGTGCAGATCTGTTCCCCATCAGCTGAATCTCTGCTTTTATAAATCACCGCCACTGGCTCTGGTACGCTCAAATCCAGGATCAGATGTTCACCAGGATTCATCTGAACTGCTGAGAACACAGCTGAGGAGAAAAATTTATTCATTCGACAACTAAAGTTCAAAGGTTATGTCAGTGTTTCCATggggaaagttgctggtattcagagtcgggttacgcagctgcttaagtggattttctgagctccacattcagattattaaaatctcCTGCGTGTAGTTCAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU411870 True 582 lncRNA 0.45 2 17440 34778

Neighbor


gene id symbol gene type direction distance location
paip1 paip1 coding upstream 26823 61601 ~ 71484 (-)
LOC113524950 NA coding upstream 38902 73680 ~ 80350 (-)
LOC113525747 NA coding upstream 51681 86459 ~ 91869 (-)
LOC117595914 NA coding upstream 60678 95456 ~ 116505 (-)
LOC117595913 NA coding upstream 84404 119182 ~ 122661 (-)
G347652 NA non-coding upstream 85531 120309 ~ 138813 (-)
G347623 NA non-coding upstream 140245 175023 ~ 206293 (-)
G347703 NA non-coding upstream 294136 328914 ~ 329608 (-)
G347704 NA non-coding upstream 298464 333242 ~ 333755 (-)
G347672 NA non-coding upstream 319549 354327 ~ 355340 (-)
G347621 NA other upstream 51885 86663 ~ 99662 (-)
G347628 NA other upstream 52789 87567 ~ 125206 (-)
G347622 NA other upstream 60585 95363 ~ 121111 (-)
LOC117595978 NA other upstream 83420 118198 ~ 149806 (-)
LOC117595911 LOC108255570 other upstream 157771 192549 ~ 201990 (-)

Expression



Co-expression Network